Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
SUCO	51430	hgsc.bcm.edu	hg19	1	172558934	172558934	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	.	NM_014283	exon18	c.G2693T	p.G898V	ATCTAGGATATGC	.	94.0	12.0	84.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
MTR	4548	hgsc.bcm.edu	hg19	1	236959019	236959019	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	MTR	NM_000254	exon1	c.C16T	p.Q6X	GCGCTCCAAGACC	.	50.0	5.0	38.0	0.0	.	127	.	.	.	none	.	.	PASS	Atlas-SNP
TLR3	7098	hgsc.bcm.edu	hg19	4	187006026	187006026	+	Silent	SNP	A	A	G	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	TLR3	NM_003265	exon5	c.A2714G	p.X905X	TACATTAAATTTA	.	127.0	13.0	102.0	0.0	.	83	.	.	.	none	.	.	PASS	Atlas-SNP
DNAH5	1767	hgsc.bcm.edu	hg19	5	13794140	13794140	+	Nonsense_Mutation	SNP	G	G	A	rs375053470		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	DNAH5	NM_001369	exon48	c.C7915T	p.R2639X	CCATTCGTTTATC	.	130.0	38.0	137.0	0.0	.	868	.	.	.	weak	.	.	PASS	Atlas-SNP
HIST1H2BG	8339	hgsc.bcm.edu	hg19	6	26216532	26216532	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	HIST1H2BG	NM_003518	exon1	c.G340C	p.E114Q	TACCTTCGGACAC	.	85.0	21.0	58.0	0.0	.	25	.	.	.	none	.	.	PASS	Atlas-SNP
DEFB110	245913	hgsc.bcm.edu	hg19	6	49986773	49986773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	DEFB110	NM_001037497	exon2	c.C121A	p.Q41K	TACATTGACCATT	.	73.0	41.0	54.0	0.0	.	5	.	.	.	none	.	.	PASS	Atlas-SNP
PNLDC1	154197	hgsc.bcm.edu	hg19	6	160239629	160239629	+	Silent	SNP	C	C	T	rs146349877		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	PNLDC1	NM_173516	exon16	c.C1167T	p.D389D	CCTTGACGTGCTG	.	62.0	12.0	54.0	0.0	.	66	.	.	.	weak	C|1.000;T|0.000	0.000	PASS	Atlas-SNP
DRD2	1813	hgsc.bcm.edu	hg19	11	113295145	113295145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	DRD2	NM_016574	exon2	c.G229A	p.A77T	CCACTGCGAGGCT	.	71.0	4.0	59.0	0.0	.	98	.	.	.	none	.	.	PASS	Atlas-SNP
SARNP	84324	hgsc.bcm.edu	hg19	12	56182870	56182870	+	Missense_Mutation	SNP	T	T	C	rs138765992	bycluster	TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	SARNP	NM_033082	exon9	c.A490G	p.I164V	TGGAGATTGAAGA	.	65.0	7.0	52.0	0.0	.	19	.	.	.	weak	T|1.000;C|0.000	0.000	PASS	Atlas-SNP
NAV3	89795	hgsc.bcm.edu	hg19	12	78516053	78516053	+	Silent	SNP	G	G	A	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	NAV3,NS,carcinoma,0,1	NAV3	NM_014903	exon16	c.G4083A	p.P1361P	TACTCCGAGCTAC	.	57.0	19.0	41.0	0.0	.	506	.	.	.	none	.	.	PASS	Atlas-SNP
IL32	9235	hgsc.bcm.edu	hg19	16	3119278	3119278	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	IL32	NM_004221	exon7	c.C489A	p.F163L	CTCTTTCCAGTCC	.	176.0	11.0	143.0	0.0	.	32	.	.	.	none	.	.	PASS	Atlas-SNP
WDR59	79726	hgsc.bcm.edu	hg19	16	74976685	74976685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	WDR59	NM_030581	exon7	c.A485G	p.N162S	AGGCAGTTAGCAT	.	98.0	7.0	67.0	0.0	.	66	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF521	25925	hgsc.bcm.edu	hg19	18	22805343	22805343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	ZNF521	NM_015461	exon4	c.G2539A	p.A847T	CGGAAGCTCCATT	.	110.0	7.0	94.0	0.0	.	269	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	hg19	19	58385790	58385790	+	Missense_Mutation	SNP	G	G	T	rs111727691	bycluster	TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	ZNF814	NM_001144989	exon3	c.C968A	p.P323H	TCATAAGGTCTTT	.	71.0	9.0	51.0	0.0	.	93	.	.	.	weak	G|0.500;T|0.500	0.500	PASS	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	hg19	19	58385793	58385793	+	Missense_Mutation	SNP	C	C	T	rs113623532	bycluster	TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	ZNF814	NM_001144989	exon3	c.G965A	p.R322K	TAAGGTCTTTTCC	.	69.0	8.0	48.0	0.0	.	93	.	.	.	weak	C|0.500;T|0.500	0.500	PASS	Atlas-SNP
RALGAPB	57148	hgsc.bcm.edu	hg19	20	37163753	37163753	+	Missense_Mutation	SNP	G	G	A	rs376931767		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	RALGAPB	NM_020336	exon16	c.G2282A	p.R761H	TGATTCGCAGCAT	.	79.0	39.0	54.0	0.0	.	134	.	.	.	weak	.	.	PASS	Atlas-SNP
URB1	9875	hgsc.bcm.edu	hg19	21	33744844	33744844	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	URB1	NM_014825	exon8	c.T973C	p.Y325H	CATCGTAAAAATT	.	35.0	20.0	26.0	0.0	.	176	.	.	.	none	.	.	PASS	Atlas-SNP
CCT8L2	150160	hgsc.bcm.edu	hg19	22	17072976	17072976	+	Silent	SNP	C	C	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	CCT8L2	NM_014406	exon1	c.G465A	p.L155L	AGGCCCCAGAGAT	.	95.0	7.0	76.0	0.0	.	150	.	.	.	none	.	.	PASS	Atlas-SNP
PANX2	56666	hgsc.bcm.edu	hg19	22	50615492	50615492	+	Silent	SNP	G	G	A	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	PANX2	NM_052839	exon2	c.G351A	p.S117S	GCCGTCGCTGTTT	.	75.0	33.0	49.0	0.0	.	69	.	.	.	none	.	.	PASS	Atlas-SNP
TEX11	56159	hgsc.bcm.edu	hg19	X	70099888	70099888	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	TEX11	NM_001003811	exon4	c.G154A	p.D52N	CTATGTCGCTGAA	.	64.0	8.0	67.0	0.0	.	132	.	.	.	none	.	.	PASS	Atlas-SNP
TXNIP	10628	hgsc.bcm.edu	hg19	1	145440061	145440064	+	Frame_Shift_Del	DEL	AAAG	AAAG	-	novel		TCGA-5P-A9K8-01A-11D-A42J-10	TCGA-5P-A9K8-10A-01D-A42M-10	AAAG	AAAG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	1dda8cfa-899d-4d02-a2c8-ebb1169560aa	dfacd90a-6863-4d3d-a67d-2a39274e2691	.	TXNIP	NM_006472	exon4	c.494_497del	p.165_166del	.	.	47.0	18.0	46.0	0.0	.	51	.	0.382979	0	none	.	.	PASS	Atlas-Indel,Pindel