Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
CD109	0	genome.wustl.edu	36	6	74573288	74573288	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2831-03A-01W-0726-08	TCGA-AB-2831-11A-01W-0727-08	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	9eba94fa-673a-44d7-b89a-45c68786815a	30b98565-39a1-44d6-b827-a48d726f57f3	6	74573288	74573288	G	T	SNP	CD109	NM_133493.3	human	genbank	54_36p	+1	validated	missense	c.2961	p.W987C	1.000	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp	HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors	70	1	1.41	95	15	13.51	NA	NA	NA
MAGI2	0	genome.wustl.edu	36	7	77487021	77487021	+	Silent	SNP	C	C	T			TCGA-AB-2831-03A-01W-0726-08	TCGA-AB-2831-11A-01W-0727-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	9eba94fa-673a-44d7-b89a-45c68786815a	30b98565-39a1-44d6-b827-a48d726f57f3	7	77487021	77487021	C	T	SNP	MAGI2	NM_012301.3	human	genbank	54_36p	-1	reviewed	silent	c.3915	p.Q1305	1.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	21	1	4.55	14	8	36.36	NA	NA	NA
C10orf28	0	genome.wustl.edu	36	10	99959110	99959110	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2831-03A-01W-0726-08	TCGA-AB-2831-11A-01W-0727-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	9eba94fa-673a-44d7-b89a-45c68786815a	30b98565-39a1-44d6-b827-a48d726f57f3	10	99959110	99959110	G	A	SNP	C10orf28	NM_014472.4	human	genbank	54_36p	+1	validated	missense	c.1249	p.G417R	0.028	NULL	NULL	-	no_errors	61	1	1.61	148	21	12.35	NA	NA	NA
DNMT3A	0	genome.wustl.edu	36	2	25316667	25316676	+	Frame_Shift_Del	DEL	TCGAGGTATA	TCGAGGTATA	-			TCGA-AB-2831-03A-01W-0726-08	TCGA-AB-2831-11A-01W-0727-08	TCGAGGTATA	TCGAGGTATA	TCGAGGTATA	-	TCGAGGTATA	TCGAGGTATA	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	9eba94fa-673a-44d7-b89a-45c68786815a	30b98565-39a1-44d6-b827-a48d726f57f3	2	25316667	25316676	TCGAGGTATA	-	DEL	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.2330_2321	p.E774fs	0.991:0.997:0.999:0.999:0.999:1.000:1.000:1.000:1.000:1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA