Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
KDM1A	0	genome.wustl.edu	36	1	23278197	23278197	+	Silent	SNP	A	A	G			TCGA-AB-2842-03A-01W-0726-08	TCGA-AB-2842-11A-01W-0727-08	A	A	A	G	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	c24211c8-c6c4-4955-9604-9192648877be	7a7b4a31-d23e-42a7-bfdc-87816eae594d	1	23278197	23278197	A	G	SNP	AOF2	NM_015013.2	human	genbank	54_36p	+1	reviewed	silent	c.1923	p.P641	0.359	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain	HMMPfam_Amino_oxidase,HMMPfam_SWIRM,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain	-	no_errors	84	8	8.70	41	38	48.10	40	29	42.03
SMARCA2	0	genome.wustl.edu	36	9	2071904	2071904	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2842-03A-01W-0726-08	TCGA-AB-2842-11A-01W-0727-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	c24211c8-c6c4-4955-9604-9192648877be	7a7b4a31-d23e-42a7-bfdc-87816eae594d	9	2071904	2071904	C	T	SNP	SMARCA2	NM_003070.3	human	genbank	54_36p	+1	reviewed	missense	c.2257	p.L753F	1.000	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_HSA,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00573,HMMSmart_SM00487,HMMPfam_QLQ,PatternScan_BROMODOMAIN_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	207	22	9.57	63	19	23.17	119	61	33.89