Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
LOC100134101	0	genome.wustl.edu	36	1	5347	5347	+	RNA	SNP	G	G	A			TCGA-AB-2873-03A-01W-0732-08	TCGA-AB-2873-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	367f90fd-a9b2-4013-8711-5eae94cddbc0	11c547f7-adee-4958-a1a8-57298a71f25e	1	5347	5347	G	A	SNP	LOC100134101	XR_036902.1	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.002	-	-	-	pseudogene	8	0	0.00	9	1	10.00	25	0	0.00
DNMT3A	0	genome.wustl.edu	36	2	25310746	25310746	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2873-03A-01W-0732-08	TCGA-AB-2873-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	367f90fd-a9b2-4013-8711-5eae94cddbc0	11c547f7-adee-4958-a1a8-57298a71f25e	2	25310746	25310746	C	T	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2645	p.R882H	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	37	23	38.33	99	48	32.43	13	8	38.10
TET2	0	genome.wustl.edu	36	4	106377186	106377186	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AB-2873-03A-01W-0732-08	TCGA-AB-2873-11A-01W-0732-08	C	C	C	-	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	367f90fd-a9b2-4013-8711-5eae94cddbc0	11c547f7-adee-4958-a1a8-57298a71f25e	4	106377186	106377186	C	-	DEL	TET2	NM_017628.1	human	genbank	54_36p	+1	validated	frame_shift_del	c.2638	p.H880fs	0.255	NULL	NULL	-	no_errors	29	6	17.14	51	34	37.78	45	50	51.55