Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
IFI44	0	genome.wustl.edu	36	1	78897616	78897616	+	Missense_Mutation	SNP	A	A	T			TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	A	A	A	T	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	1	78897616	78897616	A	T	SNP	IFI44	NM_006417.4	human	genbank	54_36p	+1	validated	missense	c.872	p.H291L	0.000	superfamily_SSF52540	superfamily_SSF52540	-	no_errors	106	13	10.83	85	48	35.56	8	11	57.89
DNMT3A	0	genome.wustl.edu	36	2	25310746	25310746	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	2	25310746	25310746	C	T	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2645	p.R882H	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	67	11	13.92	75	61	43.88	23	25	52.08
IDH1	0	genome.wustl.edu	36	2	208821357	208821357	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	2	208821357	208821357	C	T	SNP	IDH1	NM_005896.2	human	genbank	54_36p	-1	reviewed	missense	c.395	p.R132H	1.000	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors	82	8	8.89	47	55	53.40	101	105	50.97
PTPN11	0	genome.wustl.edu	36	12	111372578	111372578	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	12	111372578	111372578	T	C	SNP	PTPN11	NM_002834.3	human	genbank	54_36p	+1	reviewed	missense	c.211	p.F71L	1.000	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_SH2,HMMSmart_SM00252,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_SH2 domain	-	no_errors	98	17	14.41	60	66	51.97	18	10	35.71
NPM1	0	genome.wustl.edu	36	5	170770148	170770149	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	5	170770148	170770149	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.859_860	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA
KCNK13	0	genome.wustl.edu	36	14	89721037	89721038	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AB-2884-03A-01W-0732-08	TCGA-AB-2884-11A-01W-0732-08	-	-	-	G	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	37c88c38-7f22-41c1-862c-6b9708c97d50	e592e767-0453-45cc-98a6-ba9ba48c6622	14	89721037	89721038	-	G	INS	KCNK13	NM_022054.2	human	genbank	54_36p	+1	reviewed	frame_shift_ins	c.1164_1165	p.V390fs	0.880:1.000	NULL	HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels	-	no_errors	29	0	0.00	42	4	8.70	0	0	0.00