Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error NormalRefReads_WU NormalVarReads_WU NormalVAF_WU TumorRefReads_WU TumorVarReads_WU TumorVAF_WU RNARefReads_WU RNAVarReads_WU RNAVAF_WU RUNX1 0 genome.wustl.edu 36 21 35174748 35174748 + Missense_Mutation SNP T T C TCGA-AB-2933-03A-01W-0732-08 TCGA-AB-2933-11A-01W-0732-08 T T T C T T Verified Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq 1 dbGAP Illumina HiSeq 6d15ce69-363c-4d86-a28b-e0e5466bf654 90ef281f-d23b-4c3c-b73c-f786d6cebf30 21 35174748 35174748 T C SNP RUNX1 NM_001754.2 human genbank 54_36p -1 reviewed missense c.484 p.R162G 1.000 superfamily_p53-like transcription factors,HMMPfam_Runt superfamily_p53-like transcription factors,HMMPfam_Runt,HMMPfam_RunxI - no_errors 48 12 20.00 10 14 58.33 119 162 57.65 ENSG00000163098 0 genome.wustl.edu 36 2 113327591 113327592 + Frame_Shift_Ins INS - - G TCGA-AB-2933-03A-01W-0732-08 TCGA-AB-2933-11A-01W-0732-08 - - - G - - Verified Valid Somatic Phase_IV WXS Hybrid_Capture_Illumina_Seq 1 dbGAP Illumina HiSeq 6d15ce69-363c-4d86-a28b-e0e5466bf654 90ef281f-d23b-4c3c-b73c-f786d6cebf30 2 113327591 113327592 - G INS ENSG00000163098 ENST00000295249 human ensembl 54_36p +1 known frame_shift_ins c.93_94 p.L33fs 0.994:0.999 HMMPfam_BIR,HMMSmart_BIR,superfamily_SSF57924 HMMPfam_BIR,HMMSmart_BIR,superfamily_SSF57924 - no_errors 39 0 0.00 24 3 11.11 1 0 0.00