Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
GABRA4	0	genome.wustl.edu	36	4	46667971	46667971	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2956-03A-01W-0733-08	TCGA-AB-2956-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	601ce5dd-0025-45db-88ad-acb73e20cd1e	a860d16c-65e8-4ac4-8eeb-e6856544786c	4	46667971	46667971	G	A	SNP	GABRA4	NM_000809.2	human	genbank	54_36p	-1	reviewed	missense	c.760	p.R254W	1.000	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors	84	5	5.62	50	15	23.08	NA	NA	NA
SNCAIP	0	genome.wustl.edu	36	5	121814707	121814707	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2956-03A-01W-0733-08	TCGA-AB-2956-11A-01W-0732-08	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	601ce5dd-0025-45db-88ad-acb73e20cd1e	a860d16c-65e8-4ac4-8eeb-e6856544786c	5	121814707	121814707	G	A	SNP	SNCAIP	NM_005460.2	human	genbank	54_36p	+1	reviewed	missense	c.2266	p.E756K	1.000	NULL	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors	45	2	4.26	24	23	48.94	NA	NA	NA
MINPP1	0	genome.wustl.edu	36	10	89258179	89258179	+	Silent	SNP	C	C	T			TCGA-AB-2956-03A-01W-0733-08	TCGA-AB-2956-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	601ce5dd-0025-45db-88ad-acb73e20cd1e	a860d16c-65e8-4ac4-8eeb-e6856544786c	10	89258179	89258179	C	T	SNP	MINPP1	NM_004897.3	human	genbank	54_36p	+1	validated	silent	c.744	p.H248	0.978	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like	HMMPfam_Acid_phosphat_A,PatternScan_ER_TARGET,superfamily_Phosphoglycerate mutase-like	-	no_errors	70	5	6.67	27	6	18.18	9	12	57.14
B4GALNT3	0	genome.wustl.edu	36	12	532735	532735	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2956-03A-01W-0733-08	TCGA-AB-2956-11A-01W-0732-08	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	601ce5dd-0025-45db-88ad-acb73e20cd1e	a860d16c-65e8-4ac4-8eeb-e6856544786c	12	532735	532735	C	T	SNP	B4GALNT3	NM_173593.3	human	genbank	54_36p	+1	validated	missense	c.1385	p.T462I	0.003	NULL	HMMPfam_PA14,HMMSmart_SM00758,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors	33	2	5.71	4	6	60.00	3	0	0.00