Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
DNMT3A	0	genome.wustl.edu	36	2	25310747	25310747	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	2	25310747	25310747	G	A	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2644	p.R882C	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	731	185	20.07	257	263	50.48	10	11	52.38
BBS7	0	genome.wustl.edu	36	4	123010916	123010916	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	4	123010916	123010916	C	A	SNP	BBS7	NM_176824.2	human	genbank	54_36p	-1	reviewed	missense	c.3	p.M1I	1.000	NULL	NULL	-	no_errors	677	126	15.54	297	269	47.44	7	6	46.15
ZDHHC11	0	genome.wustl.edu	36	5	903655	903655	+	Silent	SNP	C	C	T			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	5	903655	903655	C	T	SNP	ZDHHC11	NM_024786.2	human	genbank	54_36p	-1	validated	silent	c.63	p.K21	0.002	NULL	HMMPfam_zf-DHHC	-	no_errors	134	28	17.07	92	101	52.33	NA	NA	NA
NEMF	0	genome.wustl.edu	36	14	49332385	49332385	+	Silent	SNP	A	A	G			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	A	A	A	G	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	14	49332385	49332385	A	G	SNP	SDCCAG1	NM_004713.3	human	genbank	54_36p	-1	validated	silent	c.2493	p.S831	0.789	NULL	HMMPfam_DUF814,HMMPfam_FbpA	-	no_errors	394	59	12.94	136	103	43.10	37	33	47.14
LOC100128562	0	genome.wustl.edu	36	15	73623618	73623618	+	Silent	SNP	C	C	T			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	15	73623618	73623618	C	T	SNP	LOC100128562	XM_001726845.1	human	genbank	54_36p	-1	model	silent	c.390	p.S130	0.000	NULL	PatternScan_LECTIN_LEGUME_BETA	-	no_errors	546	93	14.51	161	128	44.29	7	3	30.00
FAM57B	0	genome.wustl.edu	36	16	29944069	29944069	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	16	29944069	29944069	C	T	SNP	FAM57B	NM_031478.4	human	genbank	54_36p	-1	validated	missense	c.761	p.R254H	0.997	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_SM00724	-	no_errors	91	26	22.22	31	29	48.33	NA	NA	NA
NPM1	0	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	5	170770152	170770153	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA
FLT3	0	genome.wustl.edu	36	13	27506311	27506312	+	In_Frame_Ins	INS	-	-	ATTCATATTCTCTGAAATCAACGTAGAAGTACTCATTATCTGAGGAGCCGGCCA			TCGA-AB-2981-03A-01D-0739-09	TCGA-AB-2981-11A-01D-0739-09	-	-	-	ATTCATATTCTCTGAAATCAACGTAGAAGTACTCATTATCTGAGGAGCCGGCCA	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	7212ba7b-f637-4f9f-b616-94109bfb8898	25cb572c-99a3-4fe6-8e7f-87ed37ab2d17	13	27506311	27506312	-	ATTCATATTCTCTGAAATCAACGTAGAAGTACTCATTATCTGAGGAGCCGGCCA	INS	FLT3	NM_004119.2	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.1745_1744	p.T582in_frame_insMAGSSDNEYFYVDFREYES	0.986:0.998	superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA