Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
MT-ND1	0	genome.wustl.edu	36	MT	3919	3919	+	Silent	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	MT	3919	3919	G	A	SNP	MT-ND1	ENST00000361390	human	ensembl	54_36p	+1	known	silent	c.612	p.E204	NULL	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_2	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_1,PatternScan_COMPLEX1_ND1_2	-	no_errors	246	1	0.404858299595142	477	111	18.8775510204082	NA	NA	NA
PHF6	0	genome.wustl.edu	36	X	133378890	133378890	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	X	133378890	133378890	G	T	SNP	PHF6	NM_001015877.1	human	genbank	54_36p	+1	reviewed	missense	c.860	p.G287V	1.000	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger	-	no_errors	449	15	3.23275862068966	22	316	93.491124260355	0	37	100.00
SV2A	0	genome.wustl.edu	36	1	148144145	148144145	+	Silent	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	1	148144145	148144145	G	A	SNP	SV2A	NM_014849.3	human	genbank	54_36p	-1	validated	silent	c.1956	p.I652	0.996	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	PatternScan_SUGAR_TRANSPORT_2,HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors	4665	53	1.12	849	772	47.62	46	77	62.60
NMNAT2	0	genome.wustl.edu	36	1	181488479	181488479	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	1	181488479	181488479	C	T	SNP	NMNAT2	NM_015039.2	human	genbank	54_36p	-1	reviewed	missense	c.844	p.G282S	0.996	superfamily_Nucleotidylyl transferase	HMMPfam_CTP_transf_2,superfamily_Nucleotidylyl transferase	-	no_errors	1606	7	0.43	741	577	43.78	NA	NA	NA
KCNT2	0	genome.wustl.edu	36	1	194464035	194464035	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	1	194464035	194464035	C	T	SNP	KCNT2	NM_198503.2	human	genbank	54_36p	-1	validated	missense	c.3350	p.R1117Q	0.822	NULL	HMMPfam_BK_channel_a,HMMPfam_Ion_trans_2,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Voltage-gated potassium channels	-	no_errors	610	8	1.29449838187702	255	220	46.3157894736842	NA	NA	NA
NAV1	0	genome.wustl.edu	36	1	199884746	199884746	+	Silent	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	1	199884746	199884746	C	T	SNP	NAV1	NM_020443.3	human	genbank	54_36p	+1	reviewed	silent	c.327	p.P109	0.689	NULL	HMMSmart_AAA,PatternScan_PPASE,superfamily_SSF52540	-	no_errors	790	13	1.61892901618929	347	265	43.3006535947712	1	2	66.67
ABCB11	0	genome.wustl.edu	36	2	169488496	169488496	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	2	169488496	169488496	G	A	SNP	ABCB11	NM_003742.2	human	genbank	54_36p	-1	reviewed	missense	c.3848	p.A1283V	0.982	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	813	10	1.21506682867558	324	287	46.9721767594108	NA	NA	NA
BRPF1	0	genome.wustl.edu	36	3	9761731	9761731	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	3	9761731	9761731	T	C	SNP	BRPF1	NM_001003694.1	human	genbank	54_36p	+1	reviewed	missense	c.2960	p.V987A	1.000	NULL	HMMPfam_PWWP,HMMSmart_PWWP,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMSmart_PHD,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE_PHD_ZnF,HMMSmart_ZnF_C2H2,HMMPfam_EPL1,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SSF63748	-	no_errors	1044	2	0.19	291	203	40.85	32	30	48.39
GNAI2	0	genome.wustl.edu	36	3	50268699	50268699	+	Missense_Mutation	SNP	G	G	A	rs137853227		TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	3	50268699	50268699	G	A	SNP	GNAI2	NM_002070.2	human	genbank	54_36p	+1	validated	missense	c.536	p.R179H	0.998	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	621	2	0.321027287319422	310	94	23.2673267326733	510	213	29.46
LOC253820	0	genome.wustl.edu	36	3	170003465	170003465	+	Silent	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	3	170003465	170003465	C	T	SNP	LOC253820	XM_001726233.1	human	genbank	54_36p	+1	model	silent	c.324	p.P108	0.015	HMMSmart_SM00181,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors	899	6	0.662983425414365	642	125	16.2972620599739	0	0	0.00
DAXX	0	genome.wustl.edu	36	6	33396275	33396275	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	33396275	33396275	G	A	SNP	DAXX	NM_001350.1	human	genbank	54_36p	-1	reviewed	missense	c.1111	p.R371W	1.000	HMMPfam_Daxx	HMMPfam_Daxx	-	no_errors	1578	27	1.68	303	199	39.64	19	24	55.81
DAAM2	0	genome.wustl.edu	36	6	39977212	39977212	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	39977212	39977212	C	T	SNP	DAAM2	NM_015345.2	human	genbank	54_36p	+1	validated	missense	c.2965	p.R989C	1.000	HMMSmart_SM00498	HMMSmart_SM00498,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)	-	no_errors	709	11	1.51	235	214	47.03	NA	NA	NA
TMEM151B	0	genome.wustl.edu	36	6	44351654	44351654	+	Silent	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	44351654	44351654	G	A	SNP	TMEM151B	ENST00000388811	human	ensembl	54_36p	+1	known	silent	c.1113	p.T371	0.977	NULL	NULL	-	no_errors	292	1	0.34	116	103	47.03	NA	NA	NA
COL12A1	0	genome.wustl.edu	36	6	75917701	75917701	+	Silent	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	75917701	75917701	G	A	SNP	COL12A1	NM_004370.5	human	genbank	54_36p	-1	reviewed	silent	c.4023	p.V1341	0.459	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors	628	3	0.475435816164818	210	133	38.7755102040816	1	0	0.00
LOC643962	0	genome.wustl.edu	36	6	87597030	87597030	+	RNA	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	87597030	87597030	G	A	SNP	LOC643962	XR_041993.1	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.002	-	-	-	no_errors	251	3	1.18110236220472	52	44	45.8333333333333	NA	NA	NA
GABRR1	0	genome.wustl.edu	36	6	89948418	89948418	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	89948418	89948418	C	T	SNP	GABRR1	NM_002042.3	human	genbank	54_36p	-1	reviewed	missense	c.856	p.A286T	1.000	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL	-	no_errors	919	14	1.50	370	316	46.06	0	1	100.00
GPRC6A	0	genome.wustl.edu	36	6	117234348	117234348	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	117234348	117234348	C	A	SNP	GPRC6A	NM_148963.2	human	genbank	54_36p	-1	validated	missense	c.1213	p.D405Y	0.004	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_2,superfamily_Periplasmic binding protein-like I	-	no_errors	999	12	1.19	493	434	46.82	NA	NA	NA
NCOA7	0	genome.wustl.edu	36	6	126252643	126252643	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	A	A	A	G	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	6	126252643	126252643	A	G	SNP	NCOA7	NM_181782.1	human	genbank	54_36p	+1	validated	missense	c.1750	p.K584E	0.014	NULL	HMMSmart_SM00257,HMMPfam_GRAM,HMMPfam_TLD,HMMSmart_SM00584,HMMPfam_LysM,superfamily_LysM domain	-	no_errors	656	12	1.79640718562874	222	190	46.1165048543689	11	7	38.89
FZD1	0	genome.wustl.edu	36	7	90733681	90733681	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	7	90733681	90733681	G	A	SNP	FZD1	NM_003505.1	human	genbank	54_36p	+1	reviewed	missense	c.1550	p.R517H	1.000	HMMPfam_Frizzled	superfamily_Frizzled cysteine-rich domain,HMMPfam_Frizzled,HMMPfam_Fz,HMMSmart_SM00063	-	no_errors	576	8	1.36986301369863	242	201	45.372460496614	7	6	46.15
TSPYL5	0	genome.wustl.edu	36	8	98358079	98358079	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	98358079	98358079	C	A	SNP	TSPYL5	NM_033512.2	human	genbank	54_36p	-1	validated	missense	c.1170	p.E390D	0.998	HMMPfam_NAP	HMMPfam_NAP	-	no_errors	1485	11	0.74	406	347	46.08	NA	NA	NA
VPS13B	0	genome.wustl.edu	36	8	100274306	100274306	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	100274306	100274306	C	A	SNP	VPS13B	NM_017890.2	human	genbank	54_36p	+1	reviewed	missense	c.2360	p.T787N	1.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors	937	8	0.85	629	458	42.10	26	18	40.91
TM7SF4	0	genome.wustl.edu	36	8	105436497	105436497	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	105436497	105436497	C	T	SNP	TM7SF4	NM_030788.2	human	genbank	54_36p	+1	reviewed	missense	c.1246	p.R416C	0.698	HMMPfam_DC_STAMP	HMMPfam_DC_STAMP	-	no_errors	1265	5	0.39	294	284	49.05	NA	NA	NA
BAI1	0	genome.wustl.edu	36	8	143622650	143622650	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	143622650	143622650	C	T	SNP	BAI1	NM_001702.2	human	genbank	54_36p	+1	reviewed	missense	c.4625	p.T1542M	0.068	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors	448	4	0.884955752212389	160	178	52.6627218934911	3	4	57.14
ARC	0	genome.wustl.edu	36	8	143691876	143691876	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	G	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	143691876	143691876	C	G	SNP	ARC	NM_015193.3	human	genbank	54_36p	-1	validated	missense	c.759	p.W253C	1.000	NULL	NULL	-	no_errors	577	14	2.36886632825719	304	229	42.9643527204503	0	2	100.00
TONSL	0	genome.wustl.edu	36	8	145639466	145639466	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	8	145639466	145639466	G	A	SNP	NFKBIL2	ENST00000409379	human	ensembl	54_36p	-1	known	missense	c.311	p.T104M	0.004	superfamily_TPR-like	HMMPfam_TPR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00368,HMMSmart_SM00028,superfamily_TPR-like,superfamily_RNI-like	-	no_errors	588	9	1.50753768844221	301	238	44.1558441558442	19	16	45.71
LOC727878	0	genome.wustl.edu	36	10	2534120	2534120	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	10	2534120	2534120	C	T	SNP	LOC727878	XM_001126639.1	human	genbank	54_36p	-1	model	missense	c.20	p.R7Q	0.000	NULL	NULL	-	no_errors	1506	9	0.59	554	180	24.42	NA	NA	NA
ANK3	0	genome.wustl.edu	36	10	61596587	61596587	+	Splice_Site	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	10	61596587	61596587	C	A	SNP	ANK3	NM_020987.2	human	genbank	54_36p	-1	reviewed	splice_site	c.2551+1	e22+1	1.000	-	-	-	no_errors	1153	16	1.36869118905047	429	337	43.9947780678851	0	1	100.00
MYEOV	0	genome.wustl.edu	36	11	68820412	68820412	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	11	68820412	68820412	C	A	SNP	MYEOV	NM_138768.2	human	genbank	54_36p	+1	validated	missense	c.919	p.L307I	0.000	NULL	NULL	-	no_errors	1287	18	1.38	130	130	50.00	NA	NA	NA
EED	0	genome.wustl.edu	36	11	85646239	85646239	+	Missense_Mutation	SNP	T	T	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	T	T	T	A	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	11	85646239	85646239	T	A	SNP	EED	NM_003797.2	human	genbank	54_36p	+1	reviewed	missense	c.587	p.L196Q	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors	662	2	0.30	235	210	47.19	37	31	45.59
ASIC1	0	genome.wustl.edu	36	12	48739047	48739047	+	Silent	SNP	C	C	G			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	G	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	12	48739047	48739047	C	G	SNP	ACCN2	NM_020039.2	human	genbank	54_36p	+1	reviewed	silent	c.231	p.L77	1.000	HMMPfam_ASC	HMMPfam_ASC,PatternScan_ASC	-	no_errors	1572	10	0.63	355	329	48.10	7	2	22.22
ACSS3	0	genome.wustl.edu	36	12	80061033	80061033	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	12	80061033	80061033	C	T	SNP	ACSS3	NM_024560.2	human	genbank	54_36p	+1	validated	missense	c.797	p.A266V	0.000	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like	-	no_errors	533	1	0.187265917602996	256	230	47.3251028806584	NA	NA	NA
AP1G2	0	genome.wustl.edu	36	14	23103149	23103149	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	14	23103149	23103149	C	T	SNP	AP1G2	NM_003917.2	human	genbank	54_36p	-1	reviewed	missense	c.1037	p.R346Q	1.000	HMMPfam_Adaptin_N,superfamily_ARM-type_fold	HMMPfam_Adaptin_N,HMMPfam_Alpha_adaptinC2,HMMSmart_Alpha_adaptinC2,superfamily_Clath_adapt,superfamily_ARM-type_fold	-	no_errors	2568	35	1.34	670	596	47.08	66	74	52.86
LOC100130041	0	genome.wustl.edu	36	16	34581303	34581303	+	RNA	SNP	C	C	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	A	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	16	34581303	34581303	C	A	SNP	LOC100130041	XR_037947.1	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene	1486	9	0.602006688963211	723	230	24.1343126967471	NA	NA	NA
CTCF	0	genome.wustl.edu	36	16	66217970	66217970	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	16	66217970	66217970	C	T	SNP	CTCF	NM_006565.2	human	genbank	54_36p	+1	reviewed	nonsense	c.1369	p.R457*	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	1876	12	0.64	242	190	43.88	68	15	18.07
LOC100130734	0	genome.wustl.edu	36	17	17227878	17227878	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	17	17227878	17227878	G	A	SNP	LOC100130734	XM_001716348.1	human	genbank	54_36p	+1	model	missense	c.1078	p.D360N	0.028	NULL	NULL	-	no_errors	163	2	1.21212121212121	63	76	54.6762589928058	1231	0	0.00
NF1	0	genome.wustl.edu	36	17	26587107	26587107	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	17	26587107	26587107	C	T	SNP	NF1	NM_001042492.2	human	genbank	54_36p	+1	reviewed	nonsense	c.3916	p.R1306*	1.000	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP	HMMSmart_SM00516,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP	-	no_errors	769	5	0.64	43	229	84.19	1	16	94.12
SUZ12	0	genome.wustl.edu	36	17	27317311	27317311	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	17	27317311	27317311	G	A	SNP	SUZ12	NM_015355.2	human	genbank	54_36p	+1	reviewed	missense	c.488	p.G163D	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,HMMPfam_VEFS-Box	-	no_errors	389	7	1.76767676767677	10	86	89.5833333333333	4	54	93.10
KANSL1	0	genome.wustl.edu	36	17	41464770	41464770	+	Silent	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	17	41464770	41464770	C	T	SNP	KIAA1267	NM_015443.2	human	genbank	54_36p	-1	validated	silent	c.3237	p.A1079	0.003	NULL	NULL	-	no_errors	1127	12	1.05	296	296	49.83	25	36	59.02
LOC100132903	0	genome.wustl.edu	36	17	44156725	44156725	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	17	44156725	44156725	G	T	SNP	LOC100132903	XM_001726558.1	human	genbank	54_36p	+1	model	missense	c.104	p.G35V	0.000	NULL	NULL	-	no_errors	608	2	0.33	151	135	47.20	NA	NA	NA
CILP2	0	genome.wustl.edu	36	19	19511501	19511501	+	Silent	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	19	19511501	19511501	C	T	SNP	CILP2	NM_153221.2	human	genbank	54_36p	+1	validated	silent	c.78	p.T26	0.003	NULL	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMSmart_IGc2,superfamily_CarboxypepD_reg,HMMPfam_I-set,superfamily_SSF48726	-	no_errors	434	13	2.9082774049217	211	153	42.032967032967	NA	NA	NA
FFAR1	0	genome.wustl.edu	36	19	40534990	40534990	+	Silent	SNP	G	G	A			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	19	40534990	40534990	G	A	SNP	FFAR1	NM_005303.1	human	genbank	54_36p	+1	provisional	silent	c.696	p.T232	0.663	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors	328	3	0.906344410876133	167	148	46.984126984127	NA	NA	NA
SHANK1	0	genome.wustl.edu	36	19	55857216	55857216	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	19	55857216	55857216	C	T	SNP	SHANK1	NM_016148.2	human	genbank	54_36p	-1	validated	missense	c.6304	p.D2102N	1.000	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_SAM/Pointed domain,HMMPfam_SH3_2	-	no_errors	1108	1	0.09	265	199	42.89	6	5	45.45
ZNF677	0	genome.wustl.edu	36	19	58432183	58432183	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	19	58432183	58432183	G	T	SNP	ZNF677	NM_182609.2	human	genbank	54_36p	-1	provisional	missense	c.1609	p.H537N	0.931	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors	555	5	0.892857142857143	223	150	40.2144772117962	0	1	100.00
GDF5	0	genome.wustl.edu	36	20	33485469	33485469	+	Silent	SNP	A	A	T			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	A	A	A	T	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	20	33485469	33485469	A	T	SNP	GDF5	NM_000557.2	human	genbank	54_36p	-1	reviewed	silent	c.1158	p.T386	0.507	NULL	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1,superfamily_SSF57501	-	no_errors	256	4	1.53846153846154	114	86	43	0	0	0.00
TTN	0	genome.wustl.edu	36	2	179181002	179181003	+	In_Frame_Ins	INS	-	-	GAC			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	GAC	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	2	179181002	179181003	-	GAC	INS	TTN	ENST00000375038	human	ensembl	54_36p	-1	known	in_frame_ins	c.40703_40702	p.I13568in_frame_insSL	1.000:1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_WD40 repeat-like,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Protein kinase-like (PK-like),superfamily_WD40 repeat-like,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	-	no_errors	978	7	0.71	411	285	40.95	11	0	0.00
WAC	0	genome.wustl.edu	36	10	28864676	28864677	+	Frame_Shift_Ins	INS	-	-	AGGGC			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	AGGGC	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	10	28864676	28864677	-	AGGGC	INS	WAC	NM_016628.3	human	genbank	54_36p	+1	reviewed	frame_shift_ins	c.258_259	p.E87fs	1.000:1.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain	-	no_errors	902	14	1.52838427947598	308	289	48.4087102177554	NA	NA	NA
WT1	0	genome.wustl.edu	36	11	32374485	32374486	+	Frame_Shift_Ins	INS	-	-	GACCG			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	GACCG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	11	32374485	32374486	-	GACCG	INS	WT1	NM_024426.3	human	genbank	54_36p	-1	reviewed	frame_shift_ins	c.1143_1142	p.A382fs	0.771:0.996	HMMPfam_WT1	HMMPfam_WT1,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	474	2	0.420168067226891	284	198	41.0788381742739	NA	NA	NA
LOC387761	0	genome.wustl.edu	36	11	42231838	42231838	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	A	A	A	-	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	11	42231838	42231838	A	-	DEL	LOC387761	XM_373495.1	human	genbank	54_36p	-1	model	frame_shift_del	c.184	p.S62fs	0.003	NULL	NULL	-	no_errors	623	24	3.70	322	251	43.20	0	0	0.00
NUMA1	0	genome.wustl.edu	36	11	71402098	71402099	+	Frame_Shift_Ins	INS	-	-	CCCC			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	CCCC	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	11	71402098	71402099	-	CCCC	INS	NUMA1	NM_006185.2	human	genbank	54_36p	-1	validated	frame_shift_ins	c.4099_4098	p.C1366fs	0.996:0.977	NULL	superfamily_Prefoldin	-	no_errors	264	3	1.12359550561798	120	69	36.5079365079365	NA	NA	NA
DNM2	0	genome.wustl.edu	36	19	10770237	10770238	+	Frame_Shift_Ins	INS	-	-	GCCATCGT			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	GCCATCGT	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	19	10770237	10770238	-	GCCATCGT	INS	DNM2	NM_001005360.1	human	genbank	54_36p	+1	reviewed	frame_shift_ins	c.1411_1412	p.T471fs	1.000:1.000	HMMPfam_Dynamin_M	HMMPfam_Dynamin_M,HMMPfam_Dynamin_N,HMMSmart_SM00053,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GED,HMMSmart_SM00302,PatternScan_DYNAMIN,superfamily_PH domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	457	5	1.08225108225108	246	147	37.4045801526718	NA	NA	NA
RUNX1	0	genome.wustl.edu	36	21	35174739	35174740	+	Frame_Shift_Ins	INS	-	-	GGCTA			TCGA-AB-3009-03A-01D-0739-09	TCGA-AB-3009-11A-01D-0739-09	-	-	-	GGCTA	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	dda8a1d8-dd5b-4640-8f48-a2ef2f4898dc	b77c4cc4-b7bb-45b7-8324-70f96f9a3629	21	35174739	35174740	-	GGCTA	INS	RUNX1	NM_001754.2	human	genbank	54_36p	-1	reviewed	frame_shift_ins	c.493_492	p.G164fs	1.000:1.000	superfamily_p53-like transcription factors,HMMPfam_Runt	superfamily_p53-like transcription factors,HMMPfam_Runt,HMMPfam_RunxI	-	no_errors	532	6	1.11524163568773	306	188	38.0566801619433	NA	NA	NA