Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count RRAS2 22800 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 14303174 14303174 + Silent SNP A A C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GTTCATGGAAAGCTTGATCTA 0.348 19 73 OR4C6 219432 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 55433000 55433000 + Missense_Mutation SNP C C T rs146965889 byFrequency TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GGCCTATGACCGCTACGTGGC 0.552 15 60 A2ML1 144568 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 9004550 9004550 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TCAGTAGTCCGTGGGGAATCC 0.502 36 108 KRT3 3850 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 53187985 53187985 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CAGGTAGCTCCGCAGGTAGTT 0.532 31 116 MORN3 283385 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 122091088 122091088 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db AACAGCTGGCCGTGGTCCAGA 0.607 9 35 TMEM132B 114795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 126139203 126139203 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TATGGGGCTGGGGGATTCACA 0.463 16 62 LIG4 3981 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 108863573 108863573 + Missense_Mutation SNP G G C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ATCTGCAAAAGGAACGTGAGA 0.358 12 53 CEP128 145508 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 81329142 81329142 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TGATCCTGGCGTCTTTCCACC 0.463 18 74 TRIM69 140691 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 45050860 45050860 + Silent SNP T T C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CCATGGAGTTTCTAAAGCTGC 0.463 14 41 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 9046352 9046352 + Missense_Mutation SNP G G T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ATGAGTCAAAGTTGGAACAGT 0.478 14 77 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 9090675 9090675 + Missense_Mutation SNP G G T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TCTTGGCTATGTGGGTGCTGG 0.507 13 45 CEACAM5 1048 hgsc.bcm.edu;ucsc.edu 37 19 42213833 42213833 + Missense_Mutation SNP T T G rs112905632 byFrequency TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GGTCGAGAGATAATATACCCC 0.443 45 206 EDN2 1907 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 41948222 41948222 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CGGCGCCGGCGTCTTGGCGGG 0.642 9 26 SNX7 51375 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 99157205 99157205 + Missense_Mutation SNP A A G TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TGATCATCCAACTTTAACATT 0.328 11 52 OR10J3 441911 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 159283478 159283478 + Silent SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TATTTATAAACGCAAAGGAAA 0.398 7 66 SLC45A3 85414 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 205628648 205628648 + Missense_Mutation SNP G G A rs140263007 byFrequency TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CCCGCAGAGCGCGGGTGGAGG 0.677 7 8 HEATR1 55127 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 236766587 236766587 + Missense_Mutation SNP C C G TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ACACTTCGCTCCAAGGTTTTT 0.418 15 50 RIPK4 54101 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 21 43161994 43161994 + Silent SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GCCACTTGGCGCACTCCTCTT 0.657 34 78 CCDC108 255101 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 219868992 219868992 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GTCTTCCTTCGGCTGCTTGCC 0.532 30 75 CX3CR1 1524 hgsc.bcm.edu;ucsc.edu 37 3 39307545 39307545 + Silent SNP G G A rs17038679 by1000genomes TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CTGCCCAGACGCCTAGGCTGA 0.552 20 65 OR5H14 403273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 97868995 97868995 + Missense_Mutation SNP G G A rs148799830 TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TGGGCCCCTCGCCTTCATGTA 0.413 18 41 ZNF518B 85460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 10445887 10445887 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TACAGAGCGACGATGTGCACT 0.448 22 99 PDGFRA 5156 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 55139758 55139758 + Silent SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CAAACATCATCACGGAGATCC 0.498 28 32 AGA 175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 178361475 178361475 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TTCATCAGGACTTCCTCCAAA 0.493 30 94 GABRA1 2554 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 161324340 161324340 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ATAGCCTTCCCGCTGCTATTT 0.423 34 84 RFX6 222546 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 117248565 117248565 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TCCCGGCCACCGTCTAGCTAT 0.517 8 38 LPA 4018 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 161006128 161006128 + Silent SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GTGTCATAGACGACCAAGACT 0.448 31 159 ZNF804B 219578 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 88965634 88965634 + Missense_Mutation SNP A A G TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GTAGAGGGAAATATAAACTCT 0.353 16 69 COL1A2 1278 hgsc.bcm.edu;broad.mit.edu 37 7 94038721 94038721 + Missense_Mutation SNP G G A rs145693444 byFrequency TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CTCCGGCCCCGTTGGACCTCC 0.502 33 94 PLXNA4 91584 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 131859587 131859587 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db AACAGCACCCGCATGGTGTAA 0.582 36 125 TRPV6 55503 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 142573227 142573227 + Silent SNP T T C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TCACCTGAAGTAGCTTCTGCT 0.572 15 60 RNF32 140545 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 156437272 156437272 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CTTCAACTTCGAAATCTTTCA 0.328 12 42 NRG1 3084 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 32621577 32621577 + Missense_Mutation SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GAGTATGAAACGACCCAAGAG 0.552 9 21 TMEM252 169693 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 71155606 71155606 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CAAATAGGCCGCAATCAGGCT 0.537 9 20 LMX1B 4010 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 129453250 129453250 + Silent SNP C C T TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GCAAGGGCGACGAATTCGTGC 0.637 4 26 MXRA5 25878 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 3228242 3228242 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CAGGAGAAACGTCCCTGCCCA 0.592 34 60 HDX 139324 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 83724443 83724443 + Silent SNP A A C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ATGTCCAAGAAGACTGCTGGC 0.428 38 94 CXorf57 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 105855370 105855370 + Silent SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TAGATTGGCCGAACCCTGAGA 0.572 28 88 SAGE1 55511 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 134994995 134994995 + Missense_Mutation SNP C C T rs139129211 by1000genomes TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CTCGAGAAGGCGCTTAAAGAA 0.368 7 35 PNMA5 114824 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 152159963 152159963 + Silent SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ccttggcattgtcttccctcc 0.522 44 111 MTCP1 4515 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 154293907 154293907 + Missense_Mutation SNP T T C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TAAATGATGCTGTATCTGCCA 0.453 34 83 GABRB3 2562 broad.mit.edu;ucsc.edu 37 15 27184436 27184436 + Nonsense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db AGGTCTCCTCGTGCCTCCCAC 0.582 18 43 RECK 8434 broad.mit.edu;ucsc.edu 37 9 36102223 36102223 + Nonsense_Mutation SNP C C A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TGGATACATACCTCAGTAAGT 0.343 10 55 FAM83B 222584 broad.mit.edu;ucsc.edu 37 6 54735366 54735366 + Missense_Mutation SNP T T C TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db TGACTTAGGCTGGCCATATGT 0.458 23 84 OR2L8 391190 broad.mit.edu;ucsc.edu 37 1 248112581 248112581 + Missense_Mutation SNP T T A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db AGAGTGTGTGTGCTGATGATA 0.448 50 139 KALRN 8997 broad.mit.edu;ucsc.edu 37 3 124393414 124393414 + Silent SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db GCATCCTGGCGCCCCTCACCA 0.592 3 16 RAB11FIP1 80223 broad.mit.edu;ucsc.edu 37 8 37729072 37729072 + Missense_Mutation SNP G G T rs146365728 TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db AGGCGGGCTTGGACTCCCATT 0.542 63 195 PPP1R17 10842 broad.mit.edu;ucsc.edu 37 7 31746856 31746856 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CAAAGCAATCGTGGAAGATGA 0.433 5 28 C1orf158 0 broad.mit.edu;ucsc.edu 37 1 12820859 12820859 + Missense_Mutation SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CCTCCCCATCGCCTGCATCCT 0.577 7 36 IGHV1-58 28464 broad.mit.edu;ucsc.edu 37 14 107078546 107078546 + RNA SNP G G A TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db CGTTGTCCACGAGCCTGTCGC 0.532 17 59 MECOM 2122 broad.mit.edu;hgsc.bcm.edu 37 3 168833251 168833251 + Frame_Shift_Del DEL G G - rs141957464 byFrequency TCGA-DU-5854-01A-11D-1705-08 TCGA-DU-5854-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 2defa773-3cbd-4c3c-9437-5f6db860284e fb3c685f-0ff5-4ea1-b28f-1b037edc40db ATTCGACGTTGCTTCCTTTTT 0.488 15 34