Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count ANKRD30A 91074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 37508692 37508692 + Missense_Mutation SNP C C A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGCAAGATAACAATTGATATT 0.294 10 24 OR13A1 79290 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 45799644 45799644 + Missense_Mutation SNP G G C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AAAGTACATAGGAGCGTGGAG 0.517 6 21 XPNPEP1 7511 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 111647887 111647887 + Missense_Mutation SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AACGAGGTTCTCCTTGACAGG 0.522 5 18 OR9G1 390174 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 56468711 56468711 + Missense_Mutation SNP T T G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTATTCCCCATGTTGAATCTC 0.388 19 142 OR9G4 283189 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 56511045 56511045 + Silent SNP C C G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CCAAAAAAGACAGATTGCCAA 0.428 14 80 RAB38 23682 hgsc.bcm.edu;broad.mit.edu 37 11 87883114 87883114 + Missense_Mutation SNP C C A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTTTCCAAATCTTTCTTGACC 0.383 20 308 ALX1 8092 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 85677644 85677644 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CTCACTGAGGCCAGGGTCCAG 0.443 18 85 POSTN 10631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 38153417 38153417 + Silent SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TGTTAGTAACACCAGGTTCAA 0.333 11 30 ESR2 2100 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 64735545 64735545 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTAACACTTCCGAAGTCGGCA 0.478 13 97 TC2N 123036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 92268712 92268712 + Missense_Mutation SNP G G T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GGTCCGTGCTGGGATGAACTG 0.418 14 72 CLDN6 9074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 3065807 3065807 + Silent SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CCTGTGGCAGCGCCAGCAGTG 0.642 22 31 TNRC6A 27327 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 24802267 24802267 + Silent SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CATGTATAGATAAGACTAGCC 0.498 12 39 ANKRD11 29123 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 89348536 89348536 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 ctctccttctcgtctctccat 0.532 10 32 TP53 7157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 7578554 7578554 + Splice_Site SNP A A C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GCAGGGGAGTACTGTAGGAAG 0.557 8 16 DNAH2 146754 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 7662866 7662866 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AAAGACCAGCCCAAACCCACT 0.502 26 39 DNAH9 1770 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 11827172 11827172 + Missense_Mutation SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GAACTTTCACAACGTGTCTTT 0.458 11 60 LDLRAD4 753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 18 13645353 13645353 + Silent SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGTCCGTGAGGGCCCCACCCA 0.582 8 80 C3 718 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 6678249 6678249 + Silent SNP G G T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CTCTGCACTTGATGGGGCTGA 0.587 7 31 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 9070400 9070400 + Silent SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AACTCGTTACGGGCTCTGGGC 0.512 18 27 SLC17A7 57030 hgsc.bcm.edu;broad.mit.edu 37 19 49933968 49933968 + Missense_Mutation SNP C C G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CAGGCTCTGCCCACGGCTGCT 0.587 4 57 ZMPSTE24 10269 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 40758165 40758165 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TGAGTTTCAAGCTGATGCATT 0.388 23 127 MAST2 23139 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 46474027 46474027 + Missense_Mutation SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CATGTTTACAAAGAAAGATTC 0.433 8 36 LMX1A 4009 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 165183011 165183011 + Missense_Mutation SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CCCTGCCCCATGGGCTGACTT 0.498 96 105 HMCN1 83872 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 185951454 185951454 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CAGCAGCTTACTTTGCCCTGT 0.418 36 115 AURKA 6790 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 54956513 54956513 + Missense_Mutation SNP C C A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GCTCATCAAACTTTGAAAGTT 0.373 18 90 TPTE 7179 hgsc.bcm.edu;broad.mit.edu 37 21 10908895 10908895 + Splice_Site SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTAGGAAGATTCTAAAAAGAA 0.254 4 38 AP000295.9 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 21 34625023 34625023 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TCATTGACAAGTTAATTCCAA 0.353 30 31 KRTAP12-2 353323 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 21 46086744 46086744 + Silent SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGGCTGGCTGGCAGGGGCTGG 0.667 14 12 SCN7A 6332 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 167298214 167298214 + Missense_Mutation SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGAGACCACATCAAAATCTGG 0.383 16 38 COL3A1 1281 hgsc.bcm.edu;broad.mit.edu 37 2 189867065 189867065 + Silent SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CTGCTGGTTTCCCTGGTGCTC 0.438 5 43 NEU2 4759 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 233899633 233899633 + Missense_Mutation SNP C C A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CTACTCAGACCTCCAGAGCAT 0.607 18 134 PPARG 5468 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 12458613 12458613 + Silent SNP C C T rs148844673 TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TAGATGACAGCGACTTGGCAA 0.428 7 50 TFRC 7037 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 195800987 195800987 + Missense_Mutation SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CAAGTAGCCAATCATAAATCC 0.423 11 49 GPR125 166647 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 22436987 22436987 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 ATCATTTCTGCCACAAATATA 0.393 11 49 C6orf222 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 36290199 36290199 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGGGGCTCCCGGCACTCGAGA 0.567 12 81 FILIP1 27145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 76124523 76124523 + Missense_Mutation SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGGTGTCGTTTGACAGTTCCT 0.403 108 150 ZNF292 23036 hgsc.bcm.edu;broad.mit.edu 37 6 87966561 87966561 + Missense_Mutation SNP G G C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AGAAAGTATTGCATTTGTTCC 0.373 6 84 FRK 2444 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 116381413 116381413 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTCTGCCTCCGTGGACAAACA 0.537 13 125 WIPI2 26100 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 5270498 5270498 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TGTGGGTGGCGCCTGCCTGGA 0.612 11 38 RP1 6101 hgsc.bcm.edu;broad.mit.edu 37 8 55541622 55541622 + Missense_Mutation SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AAACAAAATGATGATAGCAGA 0.393 6 77 XKR9 389668 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 71646325 71646325 + Missense_Mutation SNP A A G TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GAATTCTTATATAGGATTGTT 0.289 20 60 DMD 1756 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 32380909 32380909 + Missense_Mutation SNP C C T TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TCCTACCTTTCCAGTCTTAAT 0.483 16 27 MCF2 4168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 138678852 138678852 + Silent SNP T T C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 CCTTCATTTTTGTAGCACCTT 0.398 30 52 ULK2 9706 broad.mit.edu;ucsc.edu 37 17 19720091 19720091 + Missense_Mutation SNP A A C TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GTTGTGTGGCACCAAAACAAA 0.398 39 47 THSD7B 80731 broad.mit.edu;ucsc.edu 37 2 138320879 138320879 + Missense_Mutation SNP T T A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 AACAATGAGCTGAGGTCCCTG 0.443 4 34 SLC22A2 6582 broad.mit.edu;ucsc.edu 37 6 160679569 160679569 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GCCCGGCACCGTGTAGTTCAG 0.672 7 47 ZNF280A 129025 broad.mit.edu;ucsc.edu 37 22 22869695 22869695 + Missense_Mutation SNP G G A TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TGCAGGCTGCGACACGTGAGC 0.468 23 94 HCRTR2 3062 broad.mit.edu;hgsc.bcm.edu 37 6 55147128 55147128 + Frame_Shift_Del DEL G G - TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 ACAGAGAGCCGGAAGTCCTTG 0.483 12 23 TP53 7157 broad.mit.edu;hgsc.bcm.edu 37 17 7577081 7577099 + Frame_Shift_Del DEL TCCTCTGTGCGCCGGTCTC TCCTCTGTGCGCCGGTCTC - rs28934574 byFrequency TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 GAGATTCTCTTCCTCTGTGCGCCGGTCTCTCCCAGGACA 0.553 15 48 ATRX 546 broad.mit.edu;hgsc.bcm.edu 37 X 76939864 76939864 + Frame_Shift_Del DEL T T - TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 TATCTTCTTCTTATTTTGCTG 0.348 85 11 IDH1 3417 broad.mit.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-DU-6399-01A-12D-1705-08 TCGA-DU-6399-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1d386817-502d-4f0b-86a6-be6c07742c3a b1f23f7a-9ecf-4f17-8692-dff4f56e41b9 ATAAGCATGACGACCTATGAT 0.393 31 40