Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count HBE1 3046 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 5291062 5291062 + Missense_Mutation SNP T T C TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CTCTTCCACATTCATCTTGCT 0.507 19 23 TSPAN18 90139 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 44948236 44948236 + Silent SNP G G C rs149091051 byFrequency TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GCTGTTACACGGTGATCCTCA 0.587 68 107 P2RY2 5029 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 72945405 72945405 + Silent SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CCTGGAATGCGTCCACCACAT 0.612 19 40 DYNC2H1 79659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 102984404 102984404 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTACCAAGCAGTACGGCAAGT 0.328 23 39 PDZD3 79849 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 119059739 119059739 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TCAGCTGCCCGGGCTGGGCTG 0.607 51 72 SP7 121340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 53722415 53722415 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTAGGGCAGTCGCAGGAGGAG 0.662 14 14 ATXN2 6311 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 111908030 111908030 + Silent SNP A A G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTACAGGACTATAGACATGAG 0.418 33 57 SYT16 83851 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 62547859 62547859 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TGTGCTGTCCGCTTCCGCCTG 0.572 15 19 SYT16 83851 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 62567163 62567163 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GAGATGTCCCGTTGCAAGACG 0.458 13 17 AHNAK2 113146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 105420969 105420969 + Silent SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TCTGGGGTCCCGGCCCCCGCT 0.592 9 9 CREBBP 1387 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 3781317 3781317 + Missense_Mutation SNP C C G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CCACTTGGAGCGGCGCAAGGA 0.642 13 7 SPPL2C 162540 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 43922344 43922344 + Silent SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GGGGAAAGTACGGCGTGGCCC 0.622 20 24 TYK2 7297 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 10465220 10465220 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTCAAATAGCGCTTGTGGAAA 0.577 17 51 PSMC4 5704 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 40480518 40480518 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CTCCCGCTCACGCATTTCGAG 0.627 7 47 FBXO46 23403 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 46216180 46216180 + Nonsense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTGGTCGGTCGTGGGTAGCTC 0.697 7 9 KLK6 5653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 51466622 51466622 + Silent SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AGTCCCTCTCCAGGGGAAGGG 0.617 10 22 MYOM3 127294 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 24387556 24387556 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTACTCTTCTCGATGATGGCC 0.488 14 40 TPTE 7179 hgsc.bcm.edu;broad.mit.edu 37 21 10920147 10920147 + Missense_Mutation SNP A A T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GCCTTTCTCCAAAATAATACA 0.383 22 104 TPO 7173 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 1459909 1459909 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GATGATGACCGCTATTCTGAC 0.537 25 24 ITGA4 3676 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 182396426 182396426 + Missense_Mutation SNP A A G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTTCTTGTGTAATTTTGGGAA 0.323 33 50 GIGYF2 26058 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 233674460 233674460 + Nonsense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 ACTGACCAGGCAGCAAGAACT 0.433 18 57 ASB1 51665 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 239344637 239344637 + Silent SNP C C A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GGGCAGACATCCTGAAGGCCC 0.567 7 8 FGD5 152273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 14862336 14862336 + Silent SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TCTCTCTGTCGTGTGTAATTG 0.557 19 25 WDR6 11180 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 49049692 49049692 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GGCGACCTGCGAGTGCCTGGG 0.552 48 69 HEG1 57493 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 124692589 124692589 + Missense_Mutation SNP C C A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TAGTACACATCCGTCATCTGG 0.463 15 29 PIK3CA 5290 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 178917478 178917478 + Splice_Site SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TTTATTAAAGGTTTTGCTATC 0.338 23 62 RNF150 57484 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 141888953 141888953 + Missense_Mutation SNP T T C TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTCACGGTGATGTTTCTTTCC 0.488 28 141 MND1 84057 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 154335914 154335914 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TAACATATTCGCAATAAAATC 0.249 15 26 TRIML1 339976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 189068521 189068521 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GAACAGCCACGTCTGAGGGGC 0.542 31 32 ADAMTS16 170690 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 5237184 5237184 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GAGGATAGCCGTAATGTTTGT 0.403 42 61 CDH6 1004 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 31323148 31323148 + Silent SNP G G T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TACCCCGACGGACTCCAACAG 0.522 16 28 HCN1 348980 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 45267295 45267295 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TGAGTAAAGACGACAATATGT 0.433 48 80 HSPB3 8988 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 53751847 53751847 + Silent SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TCCTGCTGGACGTGGTCCAGT 0.547 22 43 OPN5 221391 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 47754301 47754301 + Nonsense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTCTTCTAGACGAAAGAAGAA 0.378 41 33 SLC35D3 340146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 137245387 137245387 + Silent SNP G G T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CCACCATCACGGTGGGCATGG 0.592 21 3 SLC35D3 340146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 137245388 137245388 + Missense_Mutation SNP G G T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CACCATCACGGTGGGCATGGT 0.592 21 3 ABCB1 5243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 87178715 87178715 + Silent SNP C C T rs56871767 TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CCAAGGCTGACGTGGCCTCAT 0.537 28 54 DOCK5 80005 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 25216578 25216578 + Splice_Site SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AGACATCATCGTAAGTTGCCT 0.458 60 81 RIMS2 9699 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 104898359 104898359 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CGCCAGATTTCGTTGAGCAGT 0.428 27 37 TYRP1 7306 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 12708029 12708029 + Missense_Mutation SNP A A G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AAATGCCCCTATTGGACATAA 0.348 16 1 ZNF484 83744 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 95610417 95610417 + Missense_Mutation SNP T T C TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTCACTTCTGTATGAGAATTC 0.353 28 89 LPPR1 54886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 104086328 104086328 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTCCATGACCGAAGTTACCTG 0.418 15 29 SLC46A2 57864 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 115648895 115648895 + Splice_Site SNP T T G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CGAACACCTTTCCTGTGGAAG 0.542 21 42 PLP1 5354 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 103043374 103043374 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AGGTGTTCTCCCATGGAATGC 0.478 146 218 MAGEA6 4105 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 151870194 151870194 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AAGATCAGTGGAGGACCTCGC 0.567 76 107 SI 6476 broad.mit.edu;ucsc.edu 37 3 164741401 164741401 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CACCTCCACACGAAGAGTTGA 0.388 28 59 GUCY2F 2986 broad.mit.edu;ucsc.edu 37 X 108719025 108719025 + Missense_Mutation SNP C C A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTGTCCACACCTGCTGCGGAA 0.567 30 50 ZNF624 57547 broad.mit.edu;ucsc.edu 37 17 16527452 16527452 + Nonsense_Mutation SNP C C A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CCTTTCATCTCCTTGCAAATT 0.373 70 78 GPR110 266977 broad.mit.edu;ucsc.edu 37 6 46996743 46996743 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AGGAAGCCACCGTGGCCGTCA 0.512 20 27 GRXCR2 643226 broad.mit.edu;ucsc.edu 37 5 145252495 145252495 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GGTTTGCCATCACTCTTCTGA 0.507 49 78 SGCD 6444 broad.mit.edu;ucsc.edu 37 5 155771587 155771587 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 TATGGCTGGCGGAAACGATGC 0.483 36 40 OLFML2B 25903 broad.mit.edu;ucsc.edu 37 1 161967984 161967984 + Missense_Mutation SNP C C T TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GACCAGGGTGCGGTCCGAGCG 0.627 70 102 KRT39 390792 broad.mit.edu;ucsc.edu 37 17 39122910 39122910 + Missense_Mutation SNP G G A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 ATGGGCTTGCGACAAAAGCGA 0.517 82 115 RIBC2 26150 broad.mit.edu;ucsc.edu 37 22 45821982 45821982 + Missense_Mutation SNP G G A rs149130910 byFrequency TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GTCCCTGACCGCTGGAAGGGC 0.642 6 12 OTUD3 23252 broad.mit.edu;hgsc.bcm.edu 37 1 20216922 20216923 + Frame_Shift_Ins INS - - A TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GAGGGACACTCACGAAATCATC 0.416 86 49 HSPD1 3329 broad.mit.edu;hgsc.bcm.edu 37 2 198353171 198353174 + Frame_Shift_Del DEL TCTG TCTG - TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CATCTGTAACTCTGTCTTTCTTTT 0.441 57 86 PHTF2 57157 broad.mit.edu;hgsc.bcm.edu 37 7 77569563 77569564 + Frame_Shift_Del DEL TC TC - TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 GGTTCGCGTGTCTCTTGTGTGG 0.342 47 170 OR5D14 219436 broad.mit.edu;hgsc.bcm.edu 37 11 55563460 55563461 + Frame_Shift_Ins INS - - G TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 AGAGGCTCTGTGCCCTGCTGGT 0.51 48 55 SCML2 10389 broad.mit.edu;hgsc.bcm.edu 37 X 18259468 18259469 + Frame_Shift_Del DEL TT TT - TCGA-DU-6405-01A-11D-1705-08 TCGA-DU-6405-10A-01D-1705-08 Untested Somatic Phase_I WXS none Illumina GAIIx c810082c-26de-4168-84e7-512a6a9aea65 1057ab5b-17d9-439b-8c97-c7a81ffc89c5 CACATCACTCTTGAGTAGGAAC 0.342 79 114