Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count PTER 9317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 16528411 16528411 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TATCAAGTGTGGCATTATTGG 0.448 19 128 SVIL 6840 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 29811448 29811448 + Missense_Mutation SNP C C G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CAGAGCTTCTCCTGTGGCTGT 0.557 11 88 TTC12 54970 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 113233185 113233185 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGGAGGCCTTGCGAGCAGGAG 0.423 16 115 ACACB 32 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 109644646 109644646 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TGCCAGAGCCCGTTTTTAGCA 0.527 11 65 P2RX2 22953 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 133196268 133196268 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGCCCAGGGGGGCAGCGTGTT 0.756 6 29 N4BP2L2 10443 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 33017399 33017399 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATGCTGCCACCGAAGTGAAGA 0.408 35 115 TPP2 7174 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 103287990 103287990 + Missense_Mutation SNP G G C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AAGAGCTCTAGAAAACACTGC 0.353 10 122 DAD1 1603 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 23058038 23058038 + Missense_Mutation SNP A A C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GAACCGCGAAATGACAGACAC 0.572 32 76 PRKCH 5583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 62014584 62014584 + Missense_Mutation SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CCAAATAGAACCGCCTTTCAG 0.522 51 165 ASB2 51676 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 14 94404157 94404157 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GATGGGCCCCGCCCAGCGGCT 0.597 6 28 FBN1 2200 hgsc.bcm.edu;broad.mit.edu 37 15 48760623 48760623 + Missense_Mutation SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ACAGCCAACTCGAGTTGGGTT 0.438 5 105 NOX5 79400 hgsc.bcm.edu;broad.mit.edu 37 15 69348973 69348973 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CCCCAGCTCTGGCCAAGGTGC 0.537 5 77 PRSS33 260429 hgsc.bcm.edu;ucsc.edu 37 16 2835019 2835019 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GGCGTCCTTGTGGCCCTGGGG 0.701 4 13 TP53 7157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 7578413 7578413 + Missense_Mutation SNP C C G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CAGCGCCTCACAACCTCCGTC 0.662 50 58 ALOX12B 242 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 7976156 7976156 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AAGGCACTTGTTGCGCTGGCG 0.587 10 122 HSD17B1 3292 hgsc.bcm.edu;broad.mit.edu 37 17 40705302 40705302 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GCCGCGTGGACGTGCTGGGTG 0.642 5 46 ANKRD40 91369 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 48773483 48773483 + Missense_Mutation SNP G G C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TGGAAATCTTGGAGTCGAGCA 0.393 20 85 ARMC6 93436 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 19162910 19162910 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CCTTCGATGACGACATCCGTG 0.572 15 46 HSPG2 3339 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 22162039 22162039 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTACCTTGGATAACCAGCTGG 0.562 12 39 PALMD 54873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 100133315 100133315 + Missense_Mutation SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGAACAAAGTATCCTCAGGTA 0.433 16 193 ADAM30 11085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 120438457 120438457 + Missense_Mutation SNP C C G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AACCTGATTCCCAAACTGCTC 0.438 44 66 OR2G3 81469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 247769424 247769424 + Silent SNP C C T rs144392521 TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATTTTATTTGCGAAGTACCAG 0.453 21 91 BANF2 140836 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 17716423 17716423 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGACTTCTCACTGCCTCAAGG 0.542 22 115 ARFGEF2 10564 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 47592595 47592595 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GATGGGAAAGGCCTTGACATG 0.532 8 45 FAM65C 140876 hgsc.bcm.edu;broad.mit.edu 37 20 49225174 49225174 + Silent SNP C C T rs144349290 TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TCTCATGCAGCGTGGGGATGA 0.657 12 181 APOB 338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 21250764 21250764 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GCTTTCTTTAGGAAGGTAGTT 0.418 17 71 C2orf71 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 29287763 29287763 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTGGGGCTGCGCCTCTGGCTG 0.657 15 35 PLA2R1 22925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 160832717 160832717 + Silent SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTGCATCCTGATAAAAGAGCC 0.383 12 29 IDH1 3417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATAAGCATGACGACCTATGAT 0.393 50 84 IGJ 3512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 71522083 71522083 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TAAGGCTGTTTCCACCATTTT 0.448 16 93 NEK1 4750 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 170428878 170428878 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TCAGTGATTCGATTTTTTTGC 0.338 9 55 NUP155 9631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 37351324 37351324 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CAGCCATCCTTTCCAGCCAAG 0.353 15 100 FBXL17 64839 hgsc.bcm.edu;broad.mit.edu 37 5 107197443 107197443 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GGCAGACATGTTGGGGGTCCA 0.582 5 86 LY6G5C 80741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 31644773 31644773 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GGTCATTGCAGAAATCCAGGA 0.463 15 109 GPR116 221395 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 46847698 46847698 + Missense_Mutation SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATTGGAGGACAAAACTTCCTT 0.423 19 125 ANKMY2 57037 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 16650366 16650366 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CAGCAGAGGATTCTCATTTAC 0.378 15 90 MYOM2 9172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 2048769 2048769 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTGGATATTTCGTGGACTTCA 0.542 13 75 NPBWR1 2831 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 53852887 53852887 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TGGTGTTGGCCACTGCGGAGT 0.662 9 48 ZHX1 11244 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 124266694 124266694 + Missense_Mutation SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TGTTATTTTCATAAGTCTGAT 0.358 26 283 SH3GL2 6456 hgsc.bcm.edu;broad.mit.edu 37 9 17747099 17747099 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTGAAGGAACCAAGCTAGATG 0.363 6 61 TRPM6 140803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 77435241 77435241 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GAACCATACACTCCATTAGAA 0.363 24 91 RXRA 6256 hgsc.bcm.edu;broad.mit.edu 37 9 137300950 137300950 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CCTGGCCATGGGCATGAAGCG 0.657 5 73 FAM47B 170062 hgsc.bcm.edu;broad.mit.edu 37 X 34962576 34962576 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGTGCACAGCGTGGGAGGATA 0.498 6 80 ALAS2 212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 55042060 55042060 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CATCACGCTCCCCAATCCCAG 0.527 28 95 TRPC5 7224 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 111024435 111024435 + Splice_Site SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CATTGCGTTCCTATAATTGAA 0.403 32 140 TENM1 10178 hgsc.bcm.edu;broad.mit.edu 37 X 123785903 123785903 + Silent SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GAGGGGAGTGCTGTGTATCAT 0.433 4 64 SLC17A4 10050 broad.mit.edu;ucsc.edu 37 6 25779395 25779395 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GGGCTAAAGAGCAGACATTCA 0.478 56 120 SEPN1 57190 broad.mit.edu;ucsc.edu 37 1 26135530 26135530 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATCATCCACCGGCTCCTGAGC 0.667 17 127 TBC1D25 4943 broad.mit.edu;ucsc.edu 37 X 48418056 48418056 + Missense_Mutation SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AGGCCGAGAGCGGATGGACTA 0.587 26 40 IL12B 3593 broad.mit.edu;ucsc.edu 37 5 158753714 158753714 + Missense_Mutation SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 ATCTTTCTTCAGTTCCCATAT 0.502 9 67 RASGRF2 5924 broad.mit.edu;ucsc.edu 37 5 80366346 80366346 + Silent SNP A A G TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 AACGAATGCGACCTTACCAAA 0.423 31 75 RGL2 5863 broad.mit.edu;ucsc.edu 37 6 33260297 33260297 + Missense_Mutation SNP T T C TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTGATGACACTTGGAGCCTTG 0.522 18 129 CMTM1 113540 broad.mit.edu;ucsc.edu 37 16 66612848 66612848 + Missense_Mutation SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GAAGCTTTCCCCCGCCAAGGA 0.602 14 65 DUPD1 338599 broad.mit.edu;ucsc.edu 37 10 76803652 76803652 + Silent SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CCACGCCGTGGTACTGGATGT 0.647 20 118 CEACAM5 1048 broad.mit.edu;ucsc.edu 37 19 42213763 42213763 + Missense_Mutation SNP C C T TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GGATGGCAACCGTCAAATTAT 0.488 50 135 TMPRSS11E 28983 broad.mit.edu;ucsc.edu 37 4 69343128 69343128 + Missense_Mutation SNP C C A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TTTGGAGTAACAATAAAACCT 0.368 33 224 GNL1 2794 broad.mit.edu;ucsc.edu 37 6 30514076 30514076 + Missense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 GTCTCTGGATGGGACTCCCAG 0.547 5 12 SHROOM4 57477 broad.mit.edu;hgsc.bcm.edu 37 X 50377586 50377586 + Frame_Shift_Del DEL G G - TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 CTCTCCATGTGGGGGACTGCT 0.527 18 99 TP53 7157 hgsc.bcm.edu 37 17 7572963 7572963 + Frame_Shift_Del DEL T T - TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TGAACATGAGTTTTTTATGGC 0.527 83 205 ATRX 546 broad.mit.edu 37 X 76909629 76909629 + Nonsense_Mutation SNP G G A TCGA-DU-8167-01A-11D-2253-08 TCGA-DU-8167-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx abec779c-5d98-4e48-ae7f-33158ced8b86 3c841a53-9778-4460-89ac-4fb1d9dd5f73 TTAATACGTCGCCTTTTCTTT 0.328 12 97