Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count MYEOV 26579 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 69063311 69063311 + Missense_Mutation SNP C C T TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GGACGTGTCCCGGGCCAGGAG 0.617 19 176 ANO2 57101 hgsc.bcm.edu;broad.mit.edu 37 12 5672710 5672710 + Missense_Mutation SNP G G C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CAGTCCACGAGGACGCTCAGG 0.552 9 135 NUTM1 256646 hgsc.bcm.edu;broad.mit.edu 37 15 34646897 34646897 + Silent SNP C C A TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 TGAGCTACATCAATGAGCTGT 0.527 11 172 GRIN2A 2903 hgsc.bcm.edu;broad.mit.edu 37 16 10274071 10274071 + Silent SNP G G A TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CCACGTTCACGTCCAGGGGCA 0.642 12 167 NOL3 8996 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 67208077 67208077 + Missense_Mutation SNP G G A TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CCGACAATGGGCAACGCGCAG 0.672 12 34 SIGLEC9 27180 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 51628473 51628473 + Missense_Mutation SNP G G A rs151265101 TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 AACCCAGCTCGGGCAGTGTGG 0.572 27 76 IDH1 3417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 ATAAGCATGACGACCTATGAT 0.393 12 50 VIL1 7429 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 219299258 219299258 + Missense_Mutation SNP T T C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GGGAGGCACCTCCCGAACTAA 0.607 11 96 NUP210 23225 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 13363258 13363258 + Missense_Mutation SNP G G C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CTGACCACCAGAGCTGTCTTC 0.582 77 186 FBLN2 2199 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 13655525 13655525 + Silent SNP C C T TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GCGTGCGGGCCGAGGGCCAGT 0.597 15 41 ACKR2 1238 hgsc.bcm.edu;broad.mit.edu 37 3 42906981 42906981 + Silent SNP C C T TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 TCCTGGCTGCCGTGCTTGGAT 0.557 8 104 TOMM70A 9868 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 100096610 100096610 + Missense_Mutation SNP T T C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 TGCATTGGCATTGCCAATAAG 0.348 26 57 SEC31A 22872 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 83742201 83742201 + Silent SNP T T G TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GTCTGTTCCCTAAGTTTATCA 0.343 53 124 MUC17 140453 hgsc.bcm.edu;broad.mit.edu 37 7 100684757 100684757 + Missense_Mutation SNP A A T TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GCCAGTGGTCAGTTCTGAGGC 0.483 32 479 AOC1 26 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 150553856 150553856 + Missense_Mutation SNP G G A TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 AGCCCGTGCCGTCATCTTCTT 0.582 54 82 XG 7499 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 2729413 2729413 + Missense_Mutation SNP C C G TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CCCATCGTATCCGTGGTGGTG 0.448 6 21 FAM47B 170062 hgsc.bcm.edu;broad.mit.edu 37 X 34961355 34961355 + Missense_Mutation SNP A A G TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 ATGTACCCCAATCTGGGAAAA 0.567 8 81 FOXN1 8456 broad.mit.edu;ucsc.edu 37 17 26861989 26861989 + Missense_Mutation SNP C C A TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CCTCCTGGACCCCCGCAGCCA 0.677 8 70 MED23 9439 broad.mit.edu;ucsc.edu 37 6 131913582 131913582 + Silent SNP T T C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 TAATGTTCTCTCTTGGCACTA 0.353 20 80 TMPRSS15 5651 broad.mit.edu;ucsc.edu 37 21 19647644 19647644 + Missense_Mutation SNP G G T TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 CAATATGTTTGCAGTAGTACC 0.398 7 61 ATRX 546 broad.mit.edu;hgsc.bcm.edu 37 X 76920179 76920180 + Frame_Shift_Ins INS - - C TCGA-HT-A5R7-01A-11D-A289-08 TCGA-HT-A5R7-10A-01D-A289-08 Untested Somatic Phase_I WXS none Illumina GAIIx 7c6a6736-02cf-41d3-9a6b-2d75e0b72bf5 45ec553b-1e7a-4b3c-86a1-c3f1547c1b43 GTTCTTTTTTTCCCTTCTTCTG 0.371 31 71