Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
OR6Q1	219952	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	57799000	57799000	+	Silent	SNP	G	G	A			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	TAGCCTTGTCGTGCTCAGATG	0.498	70	65
CMKLR1	1240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	12	108685742	108685742	+	Missense_Mutation	SNP	C	C	T			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	ATTGACCAGGCGAGAGAAGAG	0.483	29	55
SLITRK6	84189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	13	86370348	86370348	+	Missense_Mutation	SNP	T	T	C			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	ATCTGCAATATTGTTAAATCC	0.353	80	22
TRIM9	114088	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	14	51448645	51448645	+	Missense_Mutation	SNP	G	G	C			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	CCAAAGGCAGGATCAGGGTGG	0.517	43	58
IDH2	3418	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	90631838	90631838	+	Missense_Mutation	SNP	C	C	T	rs121913503		TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	ATGGGCGTGCCTGCCAATGGT	0.632	36	32
DVL2	1856	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	7132713	7132713	+	Silent	SNP	T	T	C			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	TTAGCGTGACTGTGATGATAT	0.567	41	62
CIC	23152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	42791757	42791757	+	Missense_Mutation	SNP	C	C	T			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	CAAGCGGCACCGGGCCCTGGT	0.612	37	10
TTC7A	57217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	47220609	47220609	+	Missense_Mutation	SNP	G	G	A			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	AAGGGCATGAGAGAGCTCCGG	0.547	50	57
AGPS	8540	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	178386040	178386040	+	Missense_Mutation	SNP	T	T	G			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	CTACTTCTATTTTGCCTTTAA	0.383	38	81
SCN10A	6336	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	3	38739794	38739794	+	Silent	SNP	G	G	A	rs142804903		TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	TGAACATGTCGTCGATGCCAG	0.547	78	77
TINAG	27283	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	54191662	54191662	+	Missense_Mutation	SNP	G	G	A			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	TTTAAATTTCGCCTTGGCACT	0.373	32	65
LAMB4	22798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	107748127	107748127	+	Missense_Mutation	SNP	G	G	T			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	CACAAACAATGTCTCCCACTC	0.398	31	45
SLC37A3	84255	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	140058508	140058508	+	Silent	SNP	G	G	A	rs142313913	byFrequency	TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	GCAGCAGGCCGTTCACAATCC	0.512	63	99
VPS13A	23230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	9	79936584	79936584	+	Missense_Mutation	SNP	G	G	A			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	TTTAAGTATGGATTATATCCG	0.338	25	37
PIK3CA	5290	broad.mit.edu;hgsc.bcm.edu	37	3	178916938	178916940	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	AGGCAACCGTGAAGAAAAGATCC	0.34	44	54
FUT5	2527	broad.mit.edu;hgsc.bcm.edu	37	19	5867346	5867347	+	Frame_Shift_Ins	INS	-	-	GG	rs111394159		TCGA-HW-7491-01A-11D-2024-08	TCGA-HW-7491-10A-01D-2024-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1c29c663-c1ec-468e-9e86-74a2b70da59e	0ba3d269-712a-4990-a51b-7288d4f2adbb	AGGTTGGCACTGGGGTTGTACA	0.663	25	39