Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count KIAA1217 56243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 24832988 24832988 + Nonsense_Mutation SNP A A T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TAAAACAGGGAAGAAGACTTT 0.463 13 122 AGAP5 729092 hgsc.bcm.edu;broad.mit.edu 37 10 75457306 75457306 + Nonsense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GGCATCTCCTGGTCACGAATG 0.592 15 197 HELLS 3070 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 96352241 96352241 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GGCTTGATGGGTCCATGTCTT 0.343 12 44 SLIT1 6585 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 98764460 98764460 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CTGTAGATGGCAGAGCTGGGG 0.602 15 65 MAP3K12 7786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 53877509 53877509 + Splice_Site SNP T T A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 AGGGCGTGTCTGCAACGGGCA 0.507 8 64 SMUG1 23583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 54577582 54577582 + Missense_Mutation SNP G G A rs149806805 byFrequency TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CACAGGCTCCGAAAACTGCAG 0.597 6 55 TBX5 6910 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 114793348 114793348 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TAGCTATTGTCGCTCCACTCT 0.517 8 56 TRPM1 4308 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 31359319 31359319 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GGAGCAATTCCTATAGCACAA 0.453 50 74 SPPL2A 84888 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 51017471 51017471 + Missense_Mutation SNP C C G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GAGGCACACACTCATTACTGA 0.313 52 120 TPM1 7168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 63336271 63336271 + Missense_Mutation SNP G G A rs104894505 TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CAAGGGCACCGAAGATGAACT 0.562 9 25 NEO1 4756 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 73428355 73428355 + Missense_Mutation SNP G G C TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CTCAAGCAGAGCTTACAGTGC 0.373 17 32 SMAD2 4087 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 18 45422914 45422914 + Missense_Mutation SNP T T C TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ACACATTTAGTATTACAGTTT 0.368 9 86 DAPK3 1613 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 3964722 3964722 + Silent SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CCTCCGTCAGCGACTCCTTCT 0.592 17 133 C3 718 hgsc.bcm.edu;broad.mit.edu 37 19 6718386 6718386 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GAACTTGTTGCGCCCCTTTTC 0.607 10 148 ZNF878 729747 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 12154973 12154973 + Nonsense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTGTGAGTTCGTATGTGCTTT 0.433 13 34 NOTCH3 4854 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 15299837 15299837 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CTATGCGGTCGAGGCACGTGG 0.667 9 32 TEAD2 8463 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 49845721 49845721 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TTTTCCAGGACGCTGTTCATC 0.572 27 35 U2AF2 11338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 56175034 56175034 + Missense_Mutation SNP G G C TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TCCAGGGCCAGTCACTAAAGA 0.567 10 106 PRRC2C 23215 hgsc.bcm.edu;broad.mit.edu 37 1 171511013 171511013 + Missense_Mutation SNP C C G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GGCTCAAGAACCAGTTAATAC 0.428 5 61 BPIFB3 359710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 20 31659936 31659936 + Silent SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 AATGGCTCAGCCATGTGGTCG 0.532 15 87 COL18A1 80781 hgsc.bcm.edu;broad.mit.edu 37 21 46909433 46909433 + Missense_Mutation SNP A A G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GCCGGGGGCGAAGGTAAGCGC 0.706 10 12 PARVB 29780 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 22 44489821 44489821 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTGACCTGCAGGAAGAAGGCA 0.547 49 104 TTN 7273 hgsc.bcm.edu;broad.mit.edu 37 2 179634978 179634978 + Missense_Mutation SNP C C G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ATGGGAAACACTAACTTCAAA 0.408 8 95 IDH1 3417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ATAAGCATGACGACCTATGAT 0.393 20 65 NGEF 25791 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 233759484 233759484 + Missense_Mutation SNP A A G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GACAGCCAGCACGTCCAGGAC 0.602 31 82 FLNB 2317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 58097875 58097875 + Splice_Site SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TATCTTTCCAGGTGTGGAAAA 0.522 83 137 CRYBG3 131544 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 3 97596597 97596597 + Nonsense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CCCTGATGACCAGGAGAGCGT 0.468 12 22 ENAM 10117 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 71508741 71508741 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GAATCAGAAACTAATCAGTCA 0.413 32 63 NAF1 92345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 164050323 164050323 + Missense_Mutation SNP T T C TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TGAAGTCTCCTGAGATACCAT 0.458 10 50 FAT1 2195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 187521295 187521295 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CGGATGTGGCCACCAAAAAAC 0.483 6 46 MAML1 9794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 5 179192669 179192669 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GAAGCAGGAGCCTGTCGAAGA 0.517 5 46 NOTCH4 4855 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 32166813 32166813 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CATGCTCTCGGCGTCGACGCC 0.677 32 46 NOTCH4 4855 hgsc.bcm.edu;broad.mit.edu 37 6 32190325 32190325 + Silent SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTGGGCGGCCCGAGGCCTGGA 0.647 8 69 PNPLA1 285848 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 36262065 36262065 + Silent SNP C C A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ACATCTGTCCCCGGGACTGCC 0.607 24 138 PPP2R5D 5528 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 42974286 42974286 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 AATAGCACGCCGCCCCCCACG 0.622 76 130 TTBK1 84630 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 43251409 43251409 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GGGCCCGAGCGCCCCTGGAGA 0.697 26 32 ZNF292 23036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 87943087 87943087 + Missense_Mutation SNP A A G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTTGGATATGAGAATTAAACA 0.308 9 22 RUNX1T1 862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 92972658 92972658 + Missense_Mutation SNP C C G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TTCTCCCAGTCTTTGTGCTGG 0.567 10 40 PLEC 5339 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 144995732 144995732 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TCCTTCACAGCCTCGTTGACG 0.687 30 44 GNE 10020 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 36249251 36249251 + Silent SNP G G A rs147290887 TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ACTCAGGTTCGGTTTTAATGC 0.408 9 65 ALDH1A1 216 hgsc.bcm.edu;ucsc.edu 37 9 75520933 75520933 + Silent SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CACTTACCACGCCATAGCAAT 0.348 6 37 FPGS 2356 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 130570869 130570869 + Silent SNP C C G TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TGCTGGAGGCCCTCGAGGAAG 0.687 20 29 NOTCH1 4851 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 139412597 139412597 + Missense_Mutation SNP C C A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ACCCAGCGAGCACTCATCCAC 0.672 9 10 FTSJ1 24140 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 48339829 48339829 + Missense_Mutation SNP G G T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CCGAGGCCGGGATGTGACGCT 0.602 30 11 LHFPL1 340596 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 111914414 111914414 + Missense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CTGGCATAGCGCCCACATTCT 0.592 36 69 NSDHL 50814 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 152037637 152037637 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GCAGAGCTTTCGCCACCTGCG 0.552 11 29 ABI3BP 25890 broad.mit.edu;ucsc.edu 37 3 100523693 100523693 + Missense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GCAGTAACACGCTGGGGCACC 0.398 13 40 CRIP3 401262 broad.mit.edu;ucsc.edu 37 6 43275627 43275627 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTATGGCCTCCCATTGTGCTG 0.607 4 35 KPRP 448834 broad.mit.edu;ucsc.edu 37 1 152733157 152733157 + Missense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CTCCTGGGGCGCCTCCTGCCC 0.662 13 84 TTC12 54970 broad.mit.edu;ucsc.edu 37 11 113215006 113215006 + Missense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GAAAACCAGCGTGTGCTAGTG 0.532 73 126 THSD7B 80731 broad.mit.edu;ucsc.edu 37 2 137814593 137814593 + Nonsense_Mutation SNP G G A TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTTGGACCATGGAGTAAATGC 0.413 39 59 DIXDC1 85458 broad.mit.edu;ucsc.edu 37 11 111835363 111835363 + Missense_Mutation SNP C C T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 ACAAGATCTCCGGGATGGGGT 0.517 7 9 HFM1 164045 broad.mit.edu;hgsc.bcm.edu 37 1 91781979 91781980 + Frame_Shift_Ins INS - - T TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 TGTCTCTTCTATTTTTTTAAAG 0.292 29 20 KIAA1147 57189 broad.mit.edu;hgsc.bcm.edu 37 7 141362626 141362626 + Frame_Shift_Del DEL T T - TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 GTCTGAAATATCCGGTTGTTT 0.502 10 2 CIC 23152 broad.mit.edu;hgsc.bcm.edu 37 19 42797750 42797750 + Frame_Shift_Del DEL A A - TCGA-IK-8125-01A-11D-2253-08 TCGA-IK-8125-10A-01D-2253-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1a94ffa8-b014-46c2-b0fc-e2ec18aa0d03 572ef2b3-0fb8-450b-9850-765fa3c1e051 CCAGGCCAGCAAATTCCCCAG 0.637 25 21