Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq A2ML1 144568 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 8990976 8990976 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . A2ML1 NM_144670 exon9 c.C900T p.T300T GGCCACCTTTGAC . 111.0 50.0 197.0 1.0 . 93 AASDH 132949 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 57250311 57250311 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AASDH NM_181806 exon2 c.A155T p.H52L TCACAGTGTAACA . 235.0 92.0 253.0 0.0 . 94 ABCA1 19 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 107599794 107599794 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCA1 NM_005502 exon10 c.T1109C p.I370T CAGATAATGCGGG . 65.0 28.0 70.0 1.0 . 1016 ABCA12 26154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 215833480 215833480 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCA12 NM_173076 exon38 c.T5742C p.D1914D TGTTATATCAAAA . 122.0 44.0 109.0 0.0 . 99 ABCA12 26154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 215914355 215914355 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCA12 NM_173076 exon6 c.T688A p.S230T CCTGGGAGAACTG . 95.0 43.0 111.0 0.0 . 99 ABCA13 154664 ucsc.edu;bcgsc.ca 37 7 48634410 48634410 + Splice_Site SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCA13 NM_152701 exon58 c.14744+1G>A . CCACAGGTGAGTT . 182.0 73.0 214.0 2.0 . 521 ABCA4 24 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 94568641 94568641 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCA4 NM_000350 exon5 c.T500G p.L167R TTAATGAGAAATA . 97.0 33.0 113.0 0.0 . 162 ABCC4 10257 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 95858957 95858957 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCC4 NM_005845 exon8 c.C990A p.I330I CACGATGATTTTG . 120.0 58.0 168.0 0.0 . 515 ABCC5 10057 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 183689367 183689367 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABCC5 NM_005688 exon11 c.A1745T p.D582V TCCAGATCGATGC . 52.0 21.0 108.0 0.0 . 137 ABLIM2 84448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 8029484 8029484 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ABLIM2 NM_001130083 exon13 c.1267+2T>A . TGCCTTACCTCGG . 121.0 42.0 106.0 0.0 . 47 ACAP2 23527 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 195112843 195112843 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACAP2 NM_012287 exon2 c.A87T p.A29A CAATTCTGCCACA . 775.0 294.0 806.0 1.0 . 136 ACE 1636 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 61566056 61566056 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACE NM_000789 exon16 c.T2353G p.W785G CTGTTATGGGCAT . 70.0 29.0 68.0 0.0 . 94 ACOXL 55289 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 111556610 111556610 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACOXL NM_001142807 exon7 c.T480A p.V160V CATCGTTCCTGTC . 118.0 62.0 115.0 0.0 . 90 ACPP 55 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 132075574 132075574 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACPP NM_001099 exon10 c.A1013T p.E338V AGCACGAGCCGTA . 99.0 26.0 158.0 0.0 . 91 ACR 49 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 51178223 51178223 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACR NM_001097 exon3 c.T383C p.I128T AGAAAATCATCAT . 126.0 58.0 156.0 0.0 . 90 ACSM5 54988 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 16 20432662 20432663 + Frame_Shift_Ins INS - - C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ACSM5 NM_017888 exon5 c.706_707insC p.A236fs ACCGGGGCCCCCA . 66.0 29.0 86.0 0.0 . 70 ADAMTS13 11093 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 136324153 136324153 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS13 NM_139025 exon29 c.T4135C p.W1379R CTCTACTGGGAGT . 136.0 60.0 193.0 2.0 . 229 ADAMTS16 170690 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 5242253 5242253 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS16 NM_139056 exon17 c.A2611T p.S871C CAGCCCAGCTACA . 45.0 19.0 74.0 1.0 . 275 ADAMTS19 171019 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 128863439 128863439 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS19 NM_133638 exon5 c.1069-2A>T . GTTTTTAGGTATT . 247.0 104.0 315.0 1.0 . 295 ADAMTS2 9509 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 178548746 178548746 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS2 NM_014244 exon21 c.A3094T p.I1032F CTGAGATGTTTCC . 67.0 23.0 84.0 0.0 . 228 ADAMTS7 11173 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 79080627 79080627 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS7 NM_014272 exon8 c.C1268T p.A423V GGAGCGGCGTCGT . 84.0 41.0 121.0 1.0 . 226 ADAMTS7 11173 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 79080629 79080629 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADAMTS7 NM_014272 exon8 c.C1266T p.D422D AGCGGCGTCGTAC . 85.0 41.0 120.0 1.0 . 226 ADCY5 111 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 123051454 123051454 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADCY5 NM_183357 exon4 c.T1475A p.M492K AGGGTCATGACCA . 141.0 50.0 173.0 2.0 . 94 ADCY8 114 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 131955635 131955635 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADCY8 NM_001115 exon4 c.C1315T p.L439F CGTTGAGCATCCT . 175.0 77.0 116.0 0.0 . 157 ADNP2 22850 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 77896097 77896097 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADNP2 NM_014913 exon4 c.A2801G p.H934R CCGTCCATTTGGT . 78.0 31.0 57.0 0.0 . 140 ADRA1B 147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 159344340 159344340 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADRA1B NM_000679 exon1 c.G428A p.R143H TCGATCGCTACAT . 56.0 25.0 60.0 0.0 . 522 ADRBK1 156 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 67047308 67047308 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ADRBK1 NM_001619 exon6 c.442-2A>T . TCCCTTAGCCATA . 176.0 80.0 94.0 0.0 . 521 ADTRP 84830 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 11768527 11768527 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001143948 exon3 c.C297T p.A99A TCTGAAGGCAGTT . 262.0 57.0 162.0 1.0 . . AFF2 2334 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 147743516 147743516 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AFF2 NM_002025 exon3 c.A268G p.N90D CATTCTAATCAGA . 394.0 176.0 248.0 0.0 . 135 AFMID 125061 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 76183458 76183458 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AFMID NM_001145526 exon1 c.G7C p.D3H ATGATGGATGTGT . 100.0 43.0 107.0 1.0 . 136 AGAP3 116988 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 150839513 150839513 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AGAP3 NM_031946 exon16 c.A2065T p.S689C TGGGCCAGCCTGA . 76.0 9.0 110.0 0.0 . 92 AGPAT5 55326 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 6612657 6612657 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AGPAT5 NM_018361 exon7 c.G831A p.M277I ACATATGAGAAGA . 294.0 20.0 540.0 0.0 . 90 AGTPBP1 23287 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 88292376 88292376 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AGTPBP1 NM_015239 exon6 c.T411G p.S137S AAGAATAGAATGA . 122.0 6.0 110.0 0.0 . 158 ALDH1A3 220 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 101438327 101438327 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ALDH1A3 NM_000693 exon8 c.C820T p.L274L AGCAATCTGAAGC . 165.0 22.0 181.0 1.0 . 651 ALOX12B 242 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7989531 7989531 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ALOX12B NM_001139 exon2 c.A155T p.Q52L GTGTACTGGCCCA . 74.0 33.0 102.0 0.0 . 226 ALS2 57679 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 202593826 202593826 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ALS2 NM_020919 exon14 c.G2661A p.K887K TGCTTCCTTCCTT . 162.0 86.0 180.0 0.0 . 275 ANK3 288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 61829030 61829030 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ANK3 NM_020987 exon37 c.C11609A p.T3870N GGTGAAGTGGCCT . 354.0 202.0 252.0 0.0 . 107 ANKRD26 22852 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 27306632 27306632 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ANKRD26 NM_014915 exon30 c.A4305G p.L1435L CATAGATAACAAC . 159.0 93.0 96.0 1.0 . 138 ANKRD32 84250 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 93989111 93989111 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ANKRD32 NM_032290 exon8 c.A1017T p.I339I GCACATATATAAT . 449.0 201.0 488.0 0.0 . 92 ANKRD50 57182 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 125592808 125592808 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ANKRD50 NM_020337 exon4 c.G1624T p.D542Y TTGAATCACACTG . 141.0 58.0 144.0 1.0 . 90 ANKRD66 100287718 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 46721651 46721651 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001162435 exon4 c.T521A p.I174N CACAGATCTATGG . 190.0 101.0 95.0 0.0 . . ANO8 57719 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 17441186 17441186 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ANO8 NM_020959 exon9 c.T1121C p.L374P AGCATGAGCAAGA . 74.0 31.0 92.0 0.0 . 93 APEX2 27301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 55033578 55033578 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . APEX2 NM_014481 exon6 c.A1267T p.T423S CTCATGACCCCGA . 86.0 62.0 124.0 0.0 . 659 APLP1 333 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 36370026 36370026 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . APLP1 NM_001024807 exon16 c.C1764A p.I588I GCTGATCATGGGA . 21.0 9.0 44.0 0.0 . 92 APOB 338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 21229513 21229513 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . APOB NM_000384 exon26 c.T10227A p.S3409R GTTATGACTACCC . 109.0 48.0 103.0 0.0 . 175 ARC 23237 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 143694546 143694546 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARC NM_015193 exon1 c.G1087T p.A363S GCTCGGCCGCCTG . 86.0 36.0 53.0 0.0 . 135 ARHGAP23 57636 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 36619393 36619393 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARHGAP23 NM_001199417 exon5 c.C384A p.V128V AAGCGTCATTGGG . 107.0 39.0 136.0 0.0 . 205 ARHGAP5 394 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 32560362 32560362 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARHGAP5 NM_001173 exon2 c.A487G p.I163V TTATGCATTGATG . 95.0 50.0 104.0 1.0 . 94 ARHGEF15 22899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 8215862 8215862 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARHGEF15 NM_025014 exon2 c.G505C p.D169H GATGCAGATGCCC . 38.0 14.0 39.0 0.0 . 230 ARHGEF4 50649 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 131803692 131803692 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARHGEF4 NM_015320 exon14 c.T2003C p.L668P TGGTGCTGGCGGA . 50.0 13.0 57.0 0.0 . 292 ARHGEF7 8874 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 111938504 111938504 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARHGEF7 NM_001113511 exon18 c.A2024G p.K675R TTAGTAAGAGCCC . 78.0 8.0 80.0 0.0 . 232 ARL6IP1 23204 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 18810100 18810100 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARL6IP1 NM_015161 exon2 c.G93A p.L31L AGCCATCAGCATC . 120.0 48.0 132.0 0.0 . 90 ARVCF 421 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 22 19969151 19969151 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ARVCF NM_001670 exon5 c.A479G p.D160G GCACCATCTGCAA . 38.0 19.0 44.0 0.0 . 91 ASAH1 427 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 17933073 17933073 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ASAH1 NM_001127505 exon2 c.A150T p.S50S ATAGGTTGATTTT . 65.0 55.0 141.0 0.0 . 90 ASIC4 55515 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220396495 220396495 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_182847 exon2 c.G979T p.G327W CGCTATGGGAAGT . 292.0 113.0 409.0 1.0 . . ASTN1 460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 176927577 176927577 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ASTN1 NM_004319 exon10 c.G1640A p.S547N CTCTTGCTGAGGG . 278.0 72.0 206.0 0.0 . 319 ASXL1 171023 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 20 31023559 31023580 + Frame_Shift_Del DEL AGGCTGACACTAGAGAAGCTGC AGGCTGACACTAGAGAAGCTGC - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 AGGCTGACACTAGAGAAGCTGC AGGCTGACACTAGAGAAGCTGC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ASXL1 NM_015338 exon12 c.3044_3065del p.1015_1022del GCAGTGAGGCTGA . 61.0 24.0 75.0 0.0 . 2057 ASZ1 136991 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 117003770 117003770 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ASZ1 NM_130768 exon13 c.T1308C p.H436H TTGTATATGAGTT . 85.0 26.0 73.0 0.0 . 515 ATP2C2 9914 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 84459339 84459339 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ATP2C2 NM_014861 exon11 c.920-2A>T . TTCCCCAGGTCTC . 168.0 64.0 152.0 0.0 . 91 ATP6V1F 9296 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 128505618 128505618 + Nonsense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ATP6V1F NM_001198909 exon3 c.G430T p.E144X ACTGCCGAAGACC . 64.0 27.0 79.0 0.0 . 91 ATPBD4 89978 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 35830633 35830633 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ATPBD4 NM_001141972 exon3 c.A154T p.T52S CCACTGTCTGATA . 157.0 70.0 151.0 0.0 . 90 AVPR1B 553 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 206230897 206230897 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AVPR1B NM_000707 exon2 c.C1030A p.H344N AACAGCCACCTGT . 257.0 72.0 138.0 0.0 . 569 AZI1 22994 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 79170793 79170793 + Silent SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . AZI1 NM_014984 exon14 c.G1710C p.V570V CCGCATCACAGAC . 240.0 109.0 240.0 0.0 . 136 B3GALNT1 8706 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 160803874 160803874 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . B3GALNT1 NM_001038628 exon8 c.T669C p.H223H AGAAATATGGGTT . 69.0 25.0 84.0 0.0 . 91 B4GALNT3 283358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 666812 666812 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . B4GALNT3 NM_173593 exon16 c.G2419T p.D807Y ATCAAAGACATGG . 147.0 54.0 165.0 0.0 . 92 BAI1 575 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 143558633 143558633 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BAI1 NM_001702 exon4 c.T1216G p.C406G GCCGTGTGCCCAG . 54.0 10.0 42.0 0.0 . 1129 BANK1 55024 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 102783820 102783820 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BANK1 NM_017935 exon4 c.A762T p.L254F AGCTTTAGGTAAG . 157.0 64.0 192.0 0.0 . 93 BCAT2 587 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 49309901 49309901 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BCAT2 NM_001190 exon3 c.G173C p.G58A GTCTTCCCAAACA . 60.0 22.0 60.0 0.0 . 91 BDKRB2 624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 96707662 96707662 + Missense_Mutation SNP G G T rs201791629 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BDKRB2 NM_000623 exon3 c.G997T p.V333L GTGTACGTGATCG . 99.0 44.0 117.0 0.0 . 662 BICD1 636 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 32369200 32369200 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BICD1 NM_001714 exon2 c.C233G p.S78C CCTTCTCCATCCA . 150.0 58.0 163.0 0.0 . 153 BICD1 636 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 32490444 32490444 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BICD1 NM_001714 exon7 c.A2264G p.Y755C ATGAATATGTCAC . 114.0 50.0 130.0 0.0 . 153 BICD2 23299 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 95477644 95477644 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BICD2 NM_001003800 exon7 c.A2360T p.Q787L TTCTGCTGGATGG . 81.0 35.0 85.0 0.0 . 226 BOC 91653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 112993376 112993376 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BOC NM_033254 exon9 c.A1389T p.P463P GTGTCCAGGAGAG . 129.0 61.0 182.0 0.0 . 157 BRDT 676 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 92428482 92428482 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BRDT NM_001242806 exon2 c.T171C p.D57D TGTGGATGCTGTG . 128.0 46.0 124.0 0.0 . 374 BRIX1 55299 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 34922851 34922851 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BRIX1 NM_018321 exon6 c.G488A p.R163Q GTTCTCGGCCCCT . 381.0 136.0 419.0 0.0 . 90 BRPF3 27154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 36169160 36169160 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BRPF3 NM_015695 exon2 c.A1061C p.Q354P GTGCACAGCGGGC . 131.0 21.0 89.0 0.0 . 92 BTBD11 121551 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 108008836 108008836 + Splice_Site SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BTBD11 NM_001018072 exon7 c.1900-2A>C . GTTTATAGGTTGT . 112.0 46.0 151.0 1.0 . 93 BTF3 689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 72798773 72798773 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BTF3 NM_001037637 exon4 c.C348A p.I116I AGTGATCCACTTT . 36.0 15.0 42.0 0.0 . 90 BZRAP1 9256 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 56384317 56384317 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . BZRAP1 NM_004758 exon25 c.A4996G p.K1666E CATCCTTGTCCCC . 43.0 17.0 48.0 0.0 . 229 C11orf65 160140 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 108264018 108264018 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C11orf65 NM_152587 exon7 c.T648C p.A216A TTCAAAAGCTCTA . 211.0 80.0 310.0 2.0 . 91 C16orf62 57020 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 19640035 19640035 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C16orf62 NM_020314 exon17 c.A1727C p.N576T TTCTCAACGAAGC . 82.0 26.0 107.0 0.0 . 69 C16orf93 90835 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 30771751 30771751 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C16orf93 NM_001195620 exon4 c.T323A p.L108Q CACCCTAGCTCCA . 98.0 35.0 115.0 0.0 . 90 C16orf96 342346 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 4625242 4625242 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001145011 exon5 c.A761T p.Q254L TGGCCCAGACCAC . 26.0 6.0 31.0 0.0 . . C1orf101 257044 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 244681971 244681971 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C1orf101 NM_173807 exon8 c.T507G p.V169V AAAAGTTTATTCT . 623.0 137.0 387.0 0.0 . 154 C1orf173 127254 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 75039093 75039093 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C1orf173 NM_001002912 exon14 c.T2301C p.Y767Y CAGTGTATACGTT . 102.0 43.0 130.0 1.0 . 94 C1orf227 149643 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 213009317 213009317 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C1orf227 NM_001024601 exon2 c.A175C p.T59P TATCAGTAAAGGA . 302.0 213.0 204.0 1.0 . 514 C1orf94 84970 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 34663030 34663030 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C1orf94 NM_001134734 exon2 c.A525T p.R175S CCCCAGAGCCTCC . 104.0 46.0 88.0 0.0 . 90 C20orf194 25943 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 3274839 3274839 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C20orf194 NM_001009984 exon25 c.T2184C p.P728P CAGCACAGGAAGA . 61.0 26.0 61.0 1.0 . 68 C20orf26 26074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 20144825 20144825 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C20orf26 NM_015585 exon11 c.T1158A p.A386A CTCAGCTGCTTTT . 60.0 19.0 77.0 0.0 . 94 C20orf26 26074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 20269371 20269371 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C20orf26 NM_015585 exon23 c.T2915C p.I972T ACGACATAGCCAT . 166.0 66.0 218.0 0.0 . 94 C3orf30 152405 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 118865983 118865983 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C3orf30 NM_152539 exon1 c.A947G p.E316G CCACTGAACTAGC . 136.0 57.0 130.0 0.0 . 92 C3orf36 80111 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 133647332 133647332 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C3orf36 NM_025041 exon1 c.T316C p.C106R GTGAGCAAGGTGG . 134.0 45.0 175.0 0.0 . 91 C3orf58 205428 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 143708572 143708572 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C3orf58 NM_173552 exon3 c.G1182A p.R394R TGGCCGGCTCGAG . 142.0 69.0 140.0 2.0 . 91 C5orf22 55322 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 31534522 31534522 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C5orf22 NM_018356 exon2 c.T225C p.F75F ACTCTTTGGGTAA . 92.0 23.0 111.0 0.0 . 92 C5orf42 65250 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 37206332 37206332 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C5orf42 NM_023073 exon17 c.A3116T p.Q1039L AACAGCTGGAAAG . 306.0 30.0 343.0 0.0 . 94 C6orf25 80739 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 31691511 31691511 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C6orf25 NM_138277 exon2 c.T157C p.C53R CCGGCCTGCAAGG . 90.0 16.0 75.0 1.0 . 90 C6orf47 57827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 31627616 31627616 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C6orf47 NM_021184 exon1 c.G109T p.E37X AATTCTCCGAGGA . 247.0 47.0 163.0 0.0 . 91 C9orf50 375759 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 132375462 132375471 + Frame_Shift_Del DEL GAACAGAAGG GAACAGAAGG - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 GAACAGAAGG GAACAGAAGG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . C9orf50 NM_199350 exon6 c.1103_1112del p.368_371del TTCCATGAACAGA . 87.0 25.0 106.0 0.0 . 91 CABP5 56344 broad.mit.edu;bcgsc.ca 37 19 48537602 48537602 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CABP5 NM_019855 exon5 c.T366A p.D122E CTCCCCATCTCCA . 75.0 5.0 103.0 0.0 . 91 CACNA1D 776 hgsc.bcm.edu;broad.mit.edu 37 3 53700544 53700544 + Nonsense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CACNA1D NM_001128840 exon7 c.G1098A p.W366X GGGCTGGACAGAT . 128.0 6.0 123.0 0.0 . 100 CACNA1E 777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 181753861 181753861 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CACNA1E NM_001205293 exon41 c.C5535A p.H1845Q GCCTCACCTATCC . 202.0 42.0 152.0 0.0 . 95 CACNA2D1 781 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 81714106 81714106 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CACNA2D1 NM_000722 exon7 c.G637T p.G213C CTAGGCCAGTGGC . 263.0 114.0 302.0 0.0 . 96 CAMK2N1 55450 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 20811760 20811760 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CAMK2N1 NM_018584 exon1 c.C113G p.A38G TGCCCGGCGCCGA . 46.0 17.0 47.0 0.0 . 93 CAMKMT 79823 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 44933426 44933426 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CAMKMT NM_024766 exon5 c.G438A p.R146R TTTCAGGGCCCTT . 90.0 40.0 94.0 0.0 . 90 CAMSAP2 23271 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 200817745 200817745 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_203459 exon11 c.A1848T p.S616S TCCTTCAGAAGAT . 219.0 42.0 80.0 0.0 . . CAND2 23066 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 12858225 12858225 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CAND2 NM_001162499 exon10 c.T1794A p.L598L CCACCTTGTAGGC . 123.0 105.0 149.0 1.0 . 72 CARD11 84433 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 2968233 2968233 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CARD11 NM_032415 exon13 c.A1753T p.S585C CCCACCTGCGATG . 28.0 9.0 30.0 0.0 . 870 CARTPT 9607 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 71016426 71016426 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CARTPT NM_004291 exon3 c.T335C p.L112P CCTTCCTCCTGAA . 88.0 42.0 114.0 0.0 . 91 CASC1 55259 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 25267703 25267703 + Nonsense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CASC1 NM_001082972 exon13 c.C1672T p.Q558X CATCTTGAATCAA . 113.0 45.0 165.0 0.0 . 92 CATSPERB 79820 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 92126218 92126218 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CATSPERB NM_024764 exon15 c.T1395C p.F465F AGAAACAAAAGTA . 34.0 13.0 52.0 0.0 . 138 CC2D1A 54862 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 14029727 14029727 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CC2D1A NM_017721 exon10 c.G1021T p.V341L CCAGAGGTGCCCC . 167.0 64.0 211.0 0.0 . 90 CCDC105 126402 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 15122107 15122107 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC105 NM_173482 exon1 c.A470G p.Q157R TGCGCCAGCGCGA . 73.0 26.0 58.0 0.0 . 91 CCDC135 84229 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 57760018 57760018 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC135 NM_032269 exon13 c.C1797A p.P599P GAAGCCCGCGGAG . 239.0 115.0 294.0 0.0 . 90 CCDC136 64753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 128434789 128434789 + Nonsense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC136 NM_001201372 exon4 c.G463T p.E155X CAGGCAGAGGTGT . 222.0 83.0 314.0 1.0 . 24 CCDC136 64753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128450365 128450365 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC136 NM_022742 exon12 c.T1973G p.L658W AAGTGTTGGAGAA . 158.0 69.0 149.0 0.0 . 24 CCDC178 374864 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 30554635 30554635 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001105528 exon21 c.T2399A p.L800Q CTCTGCAGCTGAC . 43.0 15.0 48.0 0.0 . . CCDC36 339834 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 49293846 49293846 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC36 NM_001135197 exon8 c.T916C p.W306R GCTGCATGGAATC . 67.0 59.0 89.0 1.0 . 92 CCDC80 151887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 112358178 112358178 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC80 NM_199511 exon2 c.A575G p.Q192R CCTGCCTGGTGGA . 130.0 63.0 126.0 0.0 . 92 CCDC83 220047 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 85622367 85622411 + In_Frame_Del DEL TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCDC83 NM_173556 exon8 c.716_760del p.239_254del ATGCTATTCATGA . 156.0 15.0 232.0 0.0 . 91 CCKBR 887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 6292239 6292239 + Splice_Site SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCKBR NM_176875 exon5 c.812-2A>G . GTGCTCAGGGGCT . 40.0 25.0 50.0 0.0 . 574 CCL14 6358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 34311402 34311402 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCL14 NM_032962 exon3 c.A214G p.N72D GGCTGTTGGTCTC . 98.0 38.0 111.0 0.0 . 90 CCL25 6370 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 8117950 8117950 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCL25 NM_001201359 exon2 c.T17A p.L6Q GGCTCCTGGCCTG . 46.0 22.0 71.0 0.0 . 90 CCNF 899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 2499281 2499281 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCNF NM_001761 exon12 c.1219-2A>T . CTGTCTAGGTCCC . 60.0 25.0 82.0 0.0 . 658 CCSER1 401145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 91229854 91229854 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001145065 exon2 c.A419G p.E140G AAAAAGAGCACTC . 126.0 56.0 131.0 0.0 . . CCT4 10575 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 62112155 62112155 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCT4 NM_001256721 exon2 c.G180C p.M60I CTTTACCATTTTA . 105.0 51.0 124.0 0.0 . 92 CCT8 10694 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 30437364 30437364 + Silent SNP A A C rs143385323 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CCT8 NM_006585 exon7 c.T687G p.G229G TACATCACCTTCG . 75.0 38.0 90.0 0.0 A|0.999;G|0.001 90 CD101 9398 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 117556093 117556093 + Missense_Mutation SNP G G T rs201304832 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CD101 NM_001256109 exon4 c.G907T p.V303F GAACTGGTTTGCC . 108.0 42.0 136.0 0.0 G|0.999;A|0.001 94 CD200R1L 344807 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 112546319 112546319 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CD200R1L NM_001008784 exon3 c.G325T p.D109Y GAAGGTCCGAATT . 170.0 63.0 183.0 1.0 . 91 CD22 933 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 35823773 35823773 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CD22 NM_001185100 exon3 c.A358T p.R120W GGGCTGAGGATGG . 76.0 26.0 89.0 0.0 . 526 CD69 969 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 9907785 9907785 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CD69 NM_001781 exon3 c.A260G p.E87G CAGTCCTCAGAGC . 103.0 42.0 131.0 0.0 . 90 CDCA2 157313 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 25319603 25319603 + Missense_Mutation SNP G G T rs149260399 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDCA2 NM_152562 exon4 c.G266T p.R89L GTAGACGACGTTC . 53.0 40.0 120.0 1.0 G|1.000;A|0.000 90 CDCA7 83879 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 174230178 174230178 + Splice_Site SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDCA7 NM_031942 exon7 c.895-2A>C . TAATGCAGGAAGA . 65.0 34.0 80.0 0.0 . 91 CDHR1 92211 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 85970915 85970915 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDHR1 NM_001171971 exon13 c.T1479A p.A493A GGTGGCTGTCACA . 138.0 42.0 114.0 1.0 . 91 CDK2AP2 10263 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 67274928 67274928 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDK2AP2 NM_005851 exon3 c.A221G p.Y74C TCCGTGTAGGTGC . 215.0 102.0 147.0 1.0 . 90 CDK9 1025 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 130551623 130551623 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDK9 NM_001261 exon7 c.A920T p.D307V ACAGCGATGACGC . 82.0 38.0 87.0 1.0 . 521 CDON 50937 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 125891234 125891234 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CDON NM_016952 exon3 c.T258C p.S86S GTTGAGAGAAAGA . 58.0 17.0 82.0 0.0 . 158 CEACAM1 634 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 43013273 43013273 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CEACAM1 NM_001712 exon9 c.A1569G p.V523V CTTTTTTACTTCT . 126.0 61.0 154.0 0.0 . 515 CELF2 10659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 11207586 11207586 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CELF2 NM_006561 exon2 c.G212A p.G71E CTTACGGAGCCGT . 115.0 69.0 91.0 0.0 . 90 CELSR2 1952 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109801366 109801366 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CELSR2 NM_001408 exon2 c.G3623C p.R1208P AGGAGCGCCTATA . 57.0 25.0 74.0 0.0 . 526 CEP192 55125 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 18 13113583 13113583 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CEP192 NM_032142 exon41 c.7048-2A>T . TTTCGTAGGTCTC . 70.0 32.0 62.0 0.0 . 27 CHD8 57680 broad.mit.edu;bcgsc.ca 37 14 21861848 21861848 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CHD8 NM_001170629 exon31 c.C6106T p.P2036S GGGTTGGTCGGCT . 78.0 29.0 99.0 2.0 . 277 CHD9 80205 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 53337778 53337778 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CHD9 NM_025134 exon31 c.A5860T p.N1954Y CATCCAAATCCAG . 185.0 82.0 208.0 1.0 . 272 CHRM5 1133 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 34355220 34355220 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CHRM5 NM_012125 exon3 c.T302G p.L101R GGAGTCTGGCTTG . 138.0 54.0 172.0 0.0 . 91 CHSY3 337876 ucsc.edu;bcgsc.ca 37 5 129243821 129243821 + Missense_Mutation SNP A A T rs146180146 byfrequency TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CHSY3 NM_175856 exon2 c.A854T p.Y285F CTCTCTACCTGGG . 146.0 68.0 147.0 2.0 A|0.999;T|0.001 25 CHURC1-FNTB 100529261 broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 65527939 65527939 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001202559 exon14 c.T1406G p.V469G ACAAGGTGATCCA . 152.0 59.0 187.0 1.0 . . CIC 23152 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42795109 42795109 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CIC NM_015125 exon10 c.C2189G p.S730W TGTATTCGGACAA . 104.0 46.0 109.0 0.0 . 591 CIT 11113 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 120271925 120271925 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CIT NM_001206999 exon6 c.T624A p.A208A GTGAACAGCCAAA . 122.0 45.0 147.0 0.0 . 399 CLCN1 1180 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 143044041 143044041 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CLCN1 NM_000083 exon20 c.A2402T p.E801V CTGAAGAGGTGAG . 64.0 30.0 118.0 0.0 . 156 CLEC14A 161198 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 38724410 38724410 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CLEC14A NM_175060 exon1 c.G818A p.C273Y GTAGCACATTCGC . 59.0 30.0 77.0 0.0 . 94 CLEC1B 51266 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 10147839 10147839 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CLEC1B NM_016509 exon5 c.A445T p.I149F CTTTGATGTACTC . 40.0 13.0 55.0 0.0 . 90 CLN6 54982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 68504126 68504126 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CLN6 NM_017882 exon4 c.A373T p.S125C GGATGCTGGCACC . 57.0 30.0 105.0 0.0 . 91 CLVS2 134829 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 123319264 123319264 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CLVS2 NM_001010852 exon2 c.T342C p.Y114Y CCACTATGGCAGG . 76.0 28.0 95.0 0.0 . 27 CNGA4 1262 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 6262882 6262882 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CNGA4 NM_001037329 exon5 c.A1139T p.D380V AAGGAGACATTGG . 88.0 34.0 133.0 1.0 . 91 CNTNAP4 85445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 76509861 76509861 + Missense_Mutation SNP G G A rs150806968 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CNTNAP4 NM_138994 exon10 c.G1462A p.G488S GAACACGGTGGGG . 75.0 29.0 112.0 0.0 G|1.000;A|0.000 70 COASY 80347 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 40715081 40715081 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COASY NM_001042532 exon3 c.G528C p.L176L GCGACTGGCCTCG . 106.0 52.0 121.0 1.0 . 115 COG1 9382 broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 71196782 71196782 + Missense_Mutation SNP G G A rs149528257 byfrequency TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COG1 NM_018714 exon6 c.G1148A p.R383Q GAATCCGGGACGC . 123.0 54.0 143.0 1.0 G|1.000;A|0.000 91 COL11A1 1301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 103453234 103453234 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL11A1 NM_080629 exon30 c.A2493T p.A831A TGGGCCTGCTCGA . 91.0 35.0 113.0 0.0 . 586 COL1A2 1278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 94040245 94040245 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL1A2 NM_000089 exon22 c.T1242C p.A414A CAGAGCTGGCGTC . 66.0 25.0 113.0 0.0 . 521 COL20A1 57642 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 61947981 61947981 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL20A1 NM_020882 exon21 c.T2601C p.S867S GCCCTCTGCCTTC . 38.0 16.0 77.0 0.0 . 90 COL22A1 169044 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 139705929 139705929 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL22A1 NM_152888 exon35 c.A2714C p.Q905P CCTTCCTGTCCCT . 133.0 32.0 73.0 0.0 . 103 COL4A2 1284 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 111158834 111158834 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL4A2 NM_001846 exon46 c.T4475A p.L1492Q ACCTCCTGGTGAA . 272.0 29.0 325.0 1.0 . 95 COL4A4 1286 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 227886777 227886777 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL4A4 NM_000092 exon44 c.C4203T p.G1401G TGAGGGGCCTCTC . 247.0 105.0 240.0 1.0 . 142 COL4A6 1288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 107464587 107464587 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL4A6 NM_001847 exon4 c.T165C p.I55I AATTCCAATTGGT . 153.0 73.0 89.0 0.0 . 199 COL6A6 131873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130290136 130290136 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . COL6A6 NM_001102608 exon6 c.T2876G p.M959R TAGCCATGGCAGG . 193.0 80.0 240.0 0.0 . 76 CPEB1 64506 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 83226572 83226572 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CPEB1 NM_030594 exon4 c.A544T p.S182C AGGGGCTGCTAGA . 117.0 54.0 161.0 1.0 . 136 CPED1 79974 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 120781062 120781062 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001105533 exon14 c.G1881T p.G627G GGCAGGGCCAAGG . 94.0 36.0 117.0 1.0 . . CR2 1380 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 207646133 207646133 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CR2 NM_001006658 exon10 c.A1587T p.P529P CCCACCACCCCCT . 135.0 38.0 89.0 0.0 . 232 CRB2 286204 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 126133122 126133122 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CRB2 NM_173689 exon7 c.A1790T p.E597V TCGGTGAGAACGT . 32.0 7.0 28.0 1.0 . 91 CSHL1 1444 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 61987231 61987231 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSHL1 NM_022579 exon5 c.T509A p.L170H TGCTTGAGGGTCT . 150.0 71.0 137.0 0.0 . 90 CSMD1 64478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 3889582 3889582 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSMD1 NM_033225 exon4 c.T455A p.L152Q CCTTTCAGGATTT . 50.0 41.0 117.0 0.0 . 86 CSMD2 114784 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 34174805 34174805 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSMD2 NM_052896 exon22 c.T3340C p.F1114L CAGGAAAGTTGGG . 97.0 34.0 152.0 1.0 . 103 CSMD3 114788 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 113988150 113988150 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSMD3 NM_198123 exon7 c.G1258T p.A420S TATCTGCTGGATG . 316.0 145.0 150.0 0.0 . 1132 CSMD3 114788 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 8 113326785 113326785 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSMD3 NM_198123 exon48 c.T7422A p.Y2474X GTCAGGATATCCA . 354.0 83.0 184.0 0.0 . 1132 CSPP1 79848 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 67976717 67976717 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CSPP1 NM_024790 exon1 c.A84T p.R28R GACGCGAGCCCGC . 123.0 73.0 85.0 0.0 . 138 CTAG2 30848 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 153880820 153880820 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CTAG2 NM_020994 exon2 c.C355A p.P119T CCCCTGGTCGGGG . 178.0 88.0 134.0 0.0 . 131 CTNNB1 1499 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 3 41266127 41266150 + In_Frame_Del DEL ACAGCTCCTTCTCTGAGTGGTAAA ACAGCTCCTTCTCTGAGTGGTAAA - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 ACAGCTCCTTCTCTGAGTGGTAAA ACAGCTCCTTCTCTGAGTGGTAAA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 CTNNB1,NS,carcinoma,-1 CTNNB1 NM_001098209 exon3 c.124_147del p.42_49del ACTACCACAGCTC . 130.0 63.0 196.0 0.0 . 24361 CTTNBP2 83992 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 117407202 117407202 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CTTNBP2 NM_033427 exon9 c.G2807T p.G936V AGCCCTCCGTGCC . 76.0 32.0 72.0 0.0 . 94 CUL9 23113 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 43155101 43155101 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . CUL9 NM_015089 exon6 c.T1505C p.L502P GGGAGCTGCTTTT . 187.0 25.0 110.0 0.0 . 529 DACH2 117154 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 85906101 85906101 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DACH2 NM_053281 exon4 c.A703T p.N235Y GCTATGAACACTC . 295.0 142.0 183.0 1.0 . 136 DACT2 168002 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 168709146 168709146 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DACT2 NM_214462 exon4 c.T1291A p.C431S GGACACAGCTGTT . 123.0 55.0 112.0 0.0 . 226 DARC 2532 broad.mit.edu;bcgsc.ca 37 1 159176132 159176132 + Silent SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DARC NM_001122951 exon1 c.C909G p.P303P TACGCCCCTGCTC . 147.0 101.0 96.0 2.0 . 659 DARC 2532 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 159176146 159176146 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DARC NM_001122951 exon1 c.T923C p.L308P TCGCCCTATTCTG . 160.0 37.0 104.0 0.0 . 659 DAZAP1 26528 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 1434882 1434882 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DAZAP1 NM_018959 exon12 c.G1195C p.V399L CACAACGTGCAAG . 80.0 29.0 96.0 0.0 . 153 DBN1 1627 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 176886227 176886227 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DBN1 NM_080881 exon12 c.T1004C p.I335T GTGGGGATGGGAG . 26.0 6.0 26.0 0.0 . 587 DBNL 28988 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 44096470 44096470 + Missense_Mutation SNP C C A rs145524590 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DBNL NM_001122956 exon5 c.C442A p.R148S AGTGGCCGCTTCC . 90.0 13.0 81.0 0.0 C|1.000;T|0.000 91 DCAF10 79269 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 37861138 37861138 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCAF10 NM_024345 exon7 c.G1313T p.C438F CCTAGTGTACTTG . 34.0 8.0 48.0 0.0 . 115 DCAF12L2 340578 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 125298937 125298937 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCAF12L2 NM_001013628 exon1 c.G971T p.G324V TGAGAGCCCACAG . 185.0 85.0 115.0 1.0 . 113 DCC 1630 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 50923756 50923756 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCC NM_005215 exon18 c.A2767T p.T923S ATGGTAACAAAAA . 145.0 60.0 184.0 0.0 . 225 DCHS2 54798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 155156385 155156385 + Missense_Mutation SNP T T A rs147174513 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCHS2 NM_017639 exon25 c.A8054T p.D2685V AGCTGGTCTGAGT . 101.0 44.0 94.0 0.0 T|1.000;A|0.000 94 DCHS2 54798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 155226268 155226268 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCHS2 NM_017639 exon16 c.A4011G p.Q1337Q GACTTCTTGAATT . 95.0 37.0 99.0 0.0 . 94 DCN 1634 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 91546950 91546950 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DCN NM_001920 exon6 c.T669A p.L223L TTCCGTAAGGGAA . 82.0 37.0 100.0 0.0 . 555 DDX10 1662 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 108709284 108709284 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DDX10 NM_004398 exon14 c.G2077A p.E693K ACTGATGAAGGGG . 186.0 62.0 236.0 0.0 . 1145 DENND2A 27147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 140285439 140285439 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DENND2A NM_015689 exon3 c.T1195C p.L399L AATTCAAGACACA . 134.0 51.0 144.0 0.0 . 138 DENND3 22898 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 142146872 142146872 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DENND3 NM_014957 exon2 c.C127A p.P43T ACCCTGCCGCAGC . 98.0 51.0 68.0 1.0 . 91 DEPDC1B 55789 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 59899225 59899225 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DEPDC1B NM_001145208 exon9 c.G1235T p.R412I TGGACTCTTCGTA . 69.0 22.0 81.0 0.0 . 91 DGAT1 8694 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 8 145540683 145540684 + Splice_Site INS - - CC novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_012079 exon16 c.1248+2->GG . GCACTGACCTCGT . 114.0 57.0 68.0 0.0 . . DGKK 139189 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 50125538 50125538 + RNA SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DGKK . . . . GTCCAGAGAAATT . 81.0 73.0 101.0 0.0 . 227 DHX9 1660 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 182836133 182836133 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DHX9 NM_001357 exon14 c.A1512T p.G504G TCGAGGAATCAGT . 167.0 35.0 117.0 0.0 . 92 DICER1 23405 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 95560494 95560494 + Splice_Site SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DICER1 NM_177438 exon25 c.5096-1G>T . AACAATCTGAGGG . 47.0 17.0 60.0 0.0 . 961 DIEXF 27042 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 210015611 210015611 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DIEXF NM_014388 exon9 c.A1487G p.H496R CAAAGCATTTGAT . 163.0 44.0 93.0 0.0 . 91 DISC1 27185 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 231829654 231829654 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DISC1 NM_001164541 exon2 c.A150T p.T50T CTCGACAGGGCCT . 134.0 25.0 93.0 0.0 . 91 DLGAP5 9787 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 55629758 55629758 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DLGAP5 NM_014750 exon13 c.C1584G p.I528M AAGTTTGATCAGA . 47.0 14.0 72.0 0.0 . 92 DMBT1 1755 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 124339354 124339354 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DMBT1 NM_007329 exon10 c.C940A p.P314T AGCTGCCCCCACA . 150.0 43.0 155.0 2.0 . 494 DNAH14 127602 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 225270296 225270296 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH14 NM_001373 exon20 c.C3182T p.T1061I TGGTAACAGAGTT . 462.0 102.0 261.0 0.0 . 23 DNAH2 146754 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7644139 7644139 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH2 NM_020877 exon10 c.G1518A p.R506R CAAGCGGACTTAT . 52.0 18.0 51.0 0.0 . 102 DNAH2 146754 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7660453 7660453 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH2 NM_020877 exon12 c.T1949A p.L650Q AGCGGCTGCTGTT . 73.0 29.0 146.0 0.0 . 102 DNAH7 56171 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 196729249 196729249 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH7 NM_018897 exon41 c.A7130T p.H2377L TCTTCATGCCATT . 143.0 67.0 165.0 2.0 . 102 DNAH7 56171 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 196913052 196913052 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH7 NM_018897 exon4 c.A218T p.E73V AATGGTTCTGGAC . 59.0 25.0 61.0 0.0 . 102 DNAH8 1769 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 38994404 38994404 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH8 NM_001206927 exon92 c.T13797A p.V4599V TGAAGTTCTGAGA . 81.0 20.0 61.0 0.0 . 615 DNAH9 1770 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 11696953 11696953 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNAH9 NM_001372 exon42 c.A8195G p.Q2732R AAATCCAGACAGA . 102.0 40.0 111.0 0.0 . 168 DNASE1L1 1774 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 153633398 153633398 + Silent SNP C C T rs150301252 byfrequency TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DNASE1L1 NM_006730 exon3 c.G162A p.V54V CTGCAGCACCATG . 224.0 114.0 132.0 1.0 C|1.000;T|0.000 554 DPCR1 135656 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30917770 30917770 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DPCR1 NM_080870 exon2 c.A1529G p.E510G CCAATGAGAAAAC . 182.0 52.0 120.0 1.0 . 90 DPP10 57628 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 116593732 116593732 + Splice_Site SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DPP10 NM_020868 exon22 c.1951-1G>T . CCCCCAGGGTTAT . 125.0 46.0 127.0 0.0 . 142 DPP4 1803 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 162895528 162895528 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DPP4 NM_001935 exon7 c.G423T p.Q141H AATCAGCTGCCTG . 164.0 58.0 180.0 0.0 . 93 DSCAML1 57453 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 117387274 117387274 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DSCAML1 NM_020693 exon8 c.T1871A p.V624E TTCTGCACGTCAG . 83.0 20.0 130.0 1.0 . 159 DSE 29940 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 116757673 116757673 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DSE NM_001080976 exon6 c.A2042T p.Q681L ACTCTCAGCAACT . 118.0 55.0 110.0 0.0 . 91 DSP 1832 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 7556029 7556029 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DSP NM_004415 exon2 c.G249T p.M83I CTTGATGCGAGCA . 183.0 38.0 134.0 2.0 . 518 DSP 1832 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 7581019 7581019 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DSP NM_004415 exon23 c.G4596T p.E1532D TCAGGAGCAAGAA . 275.0 73.0 115.0 1.0 . 518 DSP 1832 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 7581656 7581656 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DSP NM_004415 exon23 c.A5233G p.K1745E AGTGATAAAAATG . 330.0 72.0 197.0 1.0 . 518 DST 667 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 56497806 56497806 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DST NM_001723 exon14 c.G2040T p.Q680H AACTTGCTGATGT . 136.0 26.0 94.0 0.0 . 523 DST 667 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 56328485 56328485 + Nonsense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DST NM_015548 exon81 c.C14896T p.R4966X GGGGTCGGAAAGC . 168.0 30.0 83.0 0.0 . 523 DTX2 113878 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 76112438 76112438 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DTX2 NM_001102596 exon2 c.A882T p.P294P GCCCCCAGGATCC . 143.0 55.0 154.0 0.0 . 524 DYNC2H1 79659 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 102991298 102991298 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DYNC2H1 NM_001377 exon7 c.T1122G p.N374K ATATAATCCATAT . 135.0 58.0 136.0 1.0 . 68 DYNC2H1 79659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 103026215 103026215 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DYNC2H1 NM_001377 exon25 c.A3729T p.K1243N AGCCAAAGCTGCC . 125.0 49.0 139.0 0.0 . 68 DZIP1 22873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 96237036 96237036 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DZIP1 NM_198968 exon22 c.G2478T p.V826V ATTTAGCACATGA . 123.0 50.0 181.0 0.0 . 92 DZIP1L 199221 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 137787119 137787119 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . DZIP1L NM_173543 exon13 c.C1706A p.P569Q GGGGGTGGCTCTG . 55.0 18.0 100.0 2.0 . 92 ECSIT 51295 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11618657 11618657 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ECSIT NM_016581 exon6 c.A805G p.S269G CGGGACTCTGGAT . 60.0 21.0 59.0 2.0 . 91 EDN1 1906 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 12290873 12290873 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EDN1 NM_001955 exon1 c.T11G p.L4W ATTATTTGCTCAT . 156.0 37.0 80.0 1.0 . 91 EEF1E1 9521 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 8097609 8097609 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EEF1E1 NM_001135650 exon2 c.T179C p.L60S CCCAGCAAATATT . 227.0 60.0 150.0 0.0 . 186 EFNB2 1948 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 107145427 107145427 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EFNB2 NM_004093 exon5 c.G963A p.M321I CGGGGGCATCTCC . 32.0 9.0 32.0 0.0 . 91 EGF 1950 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 110904598 110904598 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EGF NM_001963 exon16 c.A2392G p.N798D CTAAAGAACCAAG . 111.0 56.0 121.0 0.0 . 524 ELF5 2001 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 34515128 34515128 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ELF5 NM_198381 exon3 c.A283T p.S95C GGCCACTGATGTT . 95.0 45.0 117.0 0.0 . 227 ELMOD1 55531 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 107526788 107526788 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_018712 exon11 c.A828G p.T276T GCAAACATTCTGT . 59.0 30.0 84.0 0.0 . . EMD 2010 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 153607910 153607910 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EMD NM_000117 exon1 c.G66T p.P22P CATCCCGCACGGG . 100.0 46.0 77.0 0.0 . 130 EMILIN1 11117 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 27302028 27302028 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EMILIN1 NM_007046 exon1 c.A95G p.Y32C GCCTCTACACAGG . 47.0 16.0 70.0 0.0 . 91 EMR3 84658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 14772862 14772862 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EMR3 NM_032571 exon4 c.G268A p.G90R AACTTCCTTCGAC . 109.0 47.0 122.0 0.0 . 528 ENO2 2026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 7026812 7026812 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ENO2 NM_001975 exon6 c.G378C p.R126R TGAGCGGGAACTG . 43.0 16.0 50.0 0.0 . 226 ENPP2 5168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 120628551 120628551 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ENPP2 NM_001130863 exon8 c.T731A p.L244Q CCTCGCAGATGAA . 195.0 93.0 71.0 0.0 . 292 ENPP3 5169 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 132006562 132006562 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ENPP3 NM_005021 exon13 c.A1179T p.I393I CAGAATAAACTTC . 186.0 88.0 211.0 0.0 . 95 ENTHD1 150350 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 40257983 40257983 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ENTHD1 NM_152512 exon3 c.G379T p.V127F TGATGACTTGCTT . 194.0 81.0 209.0 0.0 . 93 EPB41L3 23136 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 5397253 5397253 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPB41L3 NM_012307 exon18 c.C2645A p.A882E GGCTGTGCTGCAG . 81.0 24.0 90.0 0.0 . 95 EPHA2 1969 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 16459692 16459692 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHA2 NM_004431 exon11 c.A2036T p.E679V ACGCCCTCTAGGC . 47.0 25.0 52.0 0.0 . 1419 EPHA5 2044 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 66356415 66356415 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHA5 NM_004439 exon5 c.C1082G p.P361R TTCCGAGGAGCAG . 174.0 52.0 207.0 1.0 . 1430 EPHA5 2044 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 66467379 66467379 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHA5 NM_004439 exon3 c.A890T p.E297V TTTTTCTCTTCAT . 55.0 23.0 58.0 0.0 . 1430 EPHA5 2044 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 66467935 66467935 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHA5 NM_004439 exon3 c.T334A p.W112R AAAGCCAGTTATT . 50.0 22.0 63.0 0.0 . 1430 EPHA6 285220 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 96585699 96585699 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHA6 NM_001080448 exon2 c.G416A p.G139E TACTGGGAGAGCT . 506.0 202.0 553.0 2.0 . 1561 EPHB6 2051 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 142563375 142563375 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHB6 NM_004445 exon8 c.C1092T p.A364A AGAGGCCCCCTGC . 44.0 13.0 97.0 0.0 . 1489 EPHX4 253152 broad.mit.edu;bcgsc.ca 37 1 92495733 92495733 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHX4 NM_173567 exon1 c.T97C p.S33P TGCGCCTCCATCC . 102.0 36.0 93.0 2.0 . 90 EPHX4 253152 broad.mit.edu;bcgsc.ca 37 1 92495735 92495735 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPHX4 NM_173567 exon1 c.C99A p.S33S CGCCTCCATCCAC . 103.0 36.0 90.0 1.0 . 90 EPRS 2058 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 220156702 220156702 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EPRS NM_004446 exon22 c.A3129G p.I1043M GCCACTTATGTCA . 466.0 97.0 289.0 1.0 . 92 ERCC4 2072 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 16 14020498 14020498 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ERCC4 NM_005236 exon3 c.A469T p.K157X AAAAACAAACGTG . 80.0 31.0 87.0 0.0 . 665 EVC2 132884 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 5642427 5642427 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EVC2 NM_147127 exon10 c.G1284T p.M428I AGCACTCATTTTT . 139.0 77.0 115.0 1.0 . 155 EVC2 132884 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 5578129 5578129 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EVC2 NM_147127 exon18 c.C3110T p.A1037V TGGGCTGCCTCCT . 72.0 37.0 62.0 0.0 . 155 EXOSC10 5394 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 11141273 11141273 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . EXOSC10 NM_002685 exon11 c.A1303T p.S435C CGTAGCTGAGCAT . 128.0 55.0 161.0 0.0 . 116 FAM129B 64855 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 130279260 130279260 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM129B NM_022833 exon8 c.C849A p.A283A CGCCTTGGCCTGC . 57.0 21.0 81.0 0.0 . 68 FAM13B 51306 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 137284750 137284750 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001101800 exon17 c.A1988G p.K663R ATGACCTTGGGTT . 77.0 35.0 63.0 0.0 . . FAM13C 220965 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 61014197 61014197 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM13C NM_198215 exon11 c.A1243C p.K415Q CTTGCTTAGTTAC . 116.0 36.0 109.0 2.0 . 70 FAM150A 389658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 53451056 53451056 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM150A NM_207413 exon4 c.T337C p.C113R TAGCACATCTTTT . 701.0 160.0 521.0 0.0 . 68 FAM163A 148753 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 179783192 179783192 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM163A NM_173509 exon5 c.T372G p.F124L CTCCTTTGCTCCC . 356.0 37.0 229.0 0.0 . 91 FAM186A 121006 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 50749396 50749396 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM186A NM_001145475 exon4 c.T1219C p.Y407H CTGTATATGAAAT . 69.0 33.0 75.0 0.0 . 68 FAM208B 54906 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 5789185 5789185 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_017782 exon15 c.G3801T p.V1267V GTCTGTGAGTAGA . 132.0 13.0 90.0 0.0 . . FAM47A 158724 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 34149063 34149063 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM47A NM_203408 exon1 c.T1333A p.C445S CCTCACAACGATC . 131.0 114.0 173.0 2.0 . 134 FAM5B 57795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 177245534 177245534 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM5B NM_021165 exon6 c.T976C p.S326P CAGGACTCCTGGG . 691.0 69.0 495.0 0.0 . 28 FAM5C 339479 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 190067337 190067337 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM5C NM_199051 exon8 c.A2112T p.L704L GATCTCTAGTAGT . 303.0 67.0 147.0 0.0 . 228 FAM71B 153745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 156590341 156590341 + Missense_Mutation SNP G G T rs200982218 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM71B NM_130899 exon2 c.C935A p.A312E GCCAGCGCTGTGG . 53.0 29.0 52.0 0.0 G|0.999;A|0.000 96 FAM71F2 346653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128323061 128323061 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001012454 exon5 c.A778G p.K260E AGCTACAAGATAC . 77.0 39.0 111.0 0.0 . . FAM74A3 728495 broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 40716298 40716298 + RNA SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM74A3 . . . . AAGCACCTATTTA . 247.0 48.0 254.0 0.0 . 23 FAM83B 222584 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 54805800 54805800 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM83B NM_001010872 exon5 c.T2031C p.P677P AGATCCTGGAAAT . 534.0 118.0 279.0 2.0 . 96 FAM83B 222584 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 54804890 54804890 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM83B NM_001010872 exon5 c.A1121T p.Q374L TACGTCAGTTTCA . 409.0 95.0 239.0 0.0 . 96 FAM98B 283742 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 38773693 38773693 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAM98B NM_001042429 exon7 c.A930C p.E310D AAATGAATTGATG . 150.0 60.0 149.0 0.0 . 515 FARP2 9855 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 242380941 242380941 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FARP2 NM_014808 exon13 c.C1381T p.L461F CAGCCCCTCGGGC . 89.0 40.0 96.0 0.0 . 93 FASTK 10922 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 150774867 150774867 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FASTK NM_006712 exon6 c.G1040A p.G347D GGGGTGCCTGTGG . 88.0 36.0 101.0 0.0 . 359 FAT2 2196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150930189 150930189 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAT2 NM_001447 exon7 c.C4540T p.L1514F AGCCGAGGTCCAA . 68.0 29.0 79.0 0.0 . 96 FAT3 120114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 92498202 92498202 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FAT3 NM_001008781 exon5 c.T4142C p.V1381A AAATTGTAGGGGT . 115.0 46.0 143.0 0.0 . 73 FBLN1 2192 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 45970507 45970507 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FBLN1 NM_006486 exon15 c.C1814T p.T605I TGCCTACCTTCCG . 57.0 22.0 82.0 0.0 . 515 FBN1 2200 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 15 48741033 48741033 + Missense_Mutation SNP G G T rs145082616 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FBN1 NM_000138 exon46 c.C5603A p.T1868K CCAACTGTGTCAA . 69.0 7.0 60.0 0.0 G|1.000;A|0.000 92 FCGR2A 2212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 161479767 161479767 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FCGR2A NM_001136219 exon4 c.C522T p.I174I CTCCATCCCACAA . 1276.0 240.0 853.0 1.0 . 91 FCRL6 343413 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 159779343 159779343 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FCRL6 NM_001004310 exon5 c.A756G p.S252S CCACTCAGCTCCC . 144.0 99.0 100.0 1.0 . 93 FER1L6 654463 ucsc.edu;bcgsc.ca 37 8 125103740 125103740 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FER1L6 NM_001039112 exon34 c.G4468A p.D1490N AAGCTGGATGGAC . 380.0 182.0 228.0 2.0 . 100 FERMT3 83706 ucsc.edu;bcgsc.ca 37 11 63978540 63978540 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FERMT3 NM_031471 exon4 c.G411T p.E137D CCCCGAGGAGCTG . 45.0 4.0 99.0 0.0 . 23 FGD5 152273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 14860937 14860937 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FGD5 NM_152536 exon1 c.C359A p.S120X AGGATTCAGTGGC . 187.0 158.0 204.0 1.0 . 231 FGFBP1 9982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 15938116 15938116 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FGFBP1 NM_005130 exon3 c.A140T p.Q47L TTAATCTGGGTGT . 219.0 128.0 149.0 0.0 . 90 FHAD1 114827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 15707218 15707218 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FHAD1 NM_052929 exon28 c.G3661A p.A1221T TGCAACGCAAGGT . 86.0 40.0 75.0 0.0 . 69 FLG 2312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152280562 152280562 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FLG NM_002016 exon3 c.A6800T p.H2267L CCATGATGGTTTC . 367.0 71.0 245.0 0.0 . 106 FLG2 388698 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 152328113 152328113 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FLG2 NM_001014342 exon3 c.T2149C p.S717P ATCCAGATGTCTG . 290.0 55.0 160.0 2.0 . 151 FLG2 388698 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152329823 152329823 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FLG2 NM_001014342 exon3 c.T439A p.S147T CCCTTGAGTGCCC . 388.0 272.0 266.0 0.0 . 151 FMNL1 752 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 43311537 43311537 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FMNL1 NM_005892 exon6 c.C584A p.S195Y CCTCCTCCGTGCC . 63.0 11.0 89.0 0.0 . 91 FMOD 2331 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 203316593 203316593 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FMOD NM_002023 exon2 c.A806G p.K269R AGCAGCTTGGGCG . 183.0 36.0 111.0 0.0 . 137 FN3KRP 79672 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 80674715 80674715 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FN3KRP NM_024619 exon1 c.C84T p.G28G CCAGGGCCGGAGC . 449.0 206.0 586.0 2.0 . 115 FNDC1 84624 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 159654905 159654905 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FNDC1 NM_032532 exon11 c.G3361T p.A1121S GCAGGGGCAGGTG . 53.0 32.0 44.0 0.0 . 138 FOXB2 442425 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 79635447 79635447 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FOXB2 NM_001013735 exon1 c.T877A p.S293T TTGGCGTCCGTCA . 40.0 20.0 43.0 0.0 . 205 FOXF1 2294 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 16 86544400 86544400 + Nonsense_Mutation SNP C C A rs121909336 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FOXF1 NM_001451 exon1 c.C225A p.Y75X GATCTACCAGTTC . 121.0 43.0 136.0 0.0 . 226 FOXN2 3344 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 48602463 48602463 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FOXN2 NM_002158 exon7 c.A1177G p.I393V CAAGAAATTGATG . 100.0 44.0 101.0 1.0 . 226 FPGT-TNNI3K 100526835 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 74833633 74833633 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001112808 exon15 c.A1609T p.K537X AAGATTAAAAGCA . 332.0 114.0 379.0 0.0 . . FPGT-TNNI3K 100526835 ucsc.edu;bcgsc.ca;mdanderson.org 37 1 74901765 74901765 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001112808 exon20 c.C2077A p.H693N TACAGTCACAATA . 135.0 57.0 161.0 1.0 . . FREM1 158326 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 14859459 14859459 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FREM1 NM_144966 exon5 c.T353G p.I118R GTTTCTATGAAGG . 119.0 49.0 178.0 0.0 . 138 FRMD5 84978 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 44202176 44202176 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FRMD5 NM_032892 exon5 c.T331A p.Y111N CTAAATACCTGGA . 45.0 15.0 61.0 1.0 . 91 FRS3 10817 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 41739273 41739273 + Splice_Site SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FRS3 NM_006653 exon8 c.565-2A>T . TGGGACTGGGGAA . 37.0 11.0 16.0 0.0 . 92 FTHL17 53940 ucsc.edu;bcgsc.ca 37 X 31089830 31089830 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FTHL17 NM_031894 exon1 c.A241T p.I81F GGCAGATGTGGCC . 131.0 112.0 145.0 2.0 . 130 FURIN 5045 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 15 91423153 91423153 + Nonsense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FURIN NM_002569 exon12 c.C1315T p.Q439X CTGGCCCAGAATT . 122.0 56.0 174.0 0.0 . 1083 FZD10 11211 broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 130648002 130648002 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FZD10 NM_007197 exon1 c.A515C p.Q172P GGCCGCAGCGGCC . 99.0 42.0 98.0 1.0 . 658 FZD1 8321 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 90895564 90895564 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FZD1 NM_003505 exon1 c.A1369G p.I457V CCGGCCATCAAGA . 56.0 20.0 57.0 0.0 . 658 FZD3 7976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 28385435 28385435 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . FZD3 NM_017412 exon5 c.G1158C p.G386G AGTTGGGGTTTCT . 69.0 50.0 142.0 0.0 . 659 GABBR1 2550 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29599361 29599361 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GABBR1 NM_021904 exon3 c.A101T p.H34L GGCGGGTGTATGA . 160.0 37.0 136.0 1.0 . 521 GABBR1 2550 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29591692 29591692 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GABBR1 NM_001470 exon7 c.C767A p.A256D CTAGCAGCCTCAG . 278.0 57.0 215.0 0.0 . 521 GABPB1 2553 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 50578223 50578223 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GABPB1 NM_002041 exon8 c.A1077T p.P359P TTATTTTGGATGA . 104.0 45.0 130.0 0.0 . 153 GABRA5 2558 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 27114454 27114454 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GABRA5 NM_001165037 exon3 c.T59A p.I20N TTTGTATTTCCAT . 132.0 45.0 139.0 0.0 . 91 GATM 2628 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 45668899 45668899 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GATM NM_001482 exon2 c.A188C p.D63A GGGCAGTCCTTGG . 100.0 37.0 99.0 0.0 . 90 GBGT1 26301 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 136029632 136029632 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GBGT1 NM_021996 exon7 c.C376G p.Q126E AGGACTGGATGAA . 33.0 11.0 37.0 0.0 . 90 GBP6 163351 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 89848365 89848365 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GBP6 NM_198460 exon8 c.A1295G p.H432R GAGGGCACAAGCT . 169.0 54.0 200.0 0.0 . 92 GDPD1 284161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 57351120 57351120 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GDPD1 NM_182569 exon10 c.A931T p.N311Y TTACATAACTTTT . 65.0 25.0 44.0 0.0 . 90 GEMIN5 25929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 154311783 154311783 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GEMIN5 NM_015465 exon4 c.T537C p.I179I GATGTCAATTATC . 158.0 70.0 155.0 0.0 . 228 GH2 2689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 61957713 61957713 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GH2 NM_002059 exon5 c.T622C p.C208R AGCGGCACTGCAC . 91.0 11.0 114.0 0.0 . 93 GIN1 54826 ucsc.edu;bcgsc.ca 37 5 102444366 102444366 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GIN1 NM_017676 exon2 c.G46A p.A16T AATATGCAATCTG . 81.0 30.0 105.0 2.0 . 92 GIT2 9815 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 110421240 110421240 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GIT2 NM_057170 exon6 c.A561G p.A187A ATATACTGCCAAT . 168.0 72.0 171.0 1.0 . 226 GJD2 57369 broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 35045130 35045130 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GJD2 NM_020660 exon2 c.A515G p.K172R AGCTCCTTAACCT . 169.0 67.0 233.0 2.0 . 90 GK5 256356 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 141884551 141884551 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GK5 NM_001039547 exon16 c.A1503G p.P501P CTTCTGTGGCTTG . 143.0 60.0 158.0 1.0 . 90 GLI2 2736 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 121743964 121743964 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 GLI2,NS,carcinoma,0 GLI2 NM_005270 exon12 c.G2067T p.G689G GCCCGGGAGCCTG . 138.0 66.0 160.0 0.0 . 954 GLI4 2738 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 144351615 144351615 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GLI4 NM_138465 exon2 c.G49T p.V17F TCCCCTGTCAGTC . 151.0 68.0 98.0 0.0 . 91 GLP1R 2740 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 39040691 39040691 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GLP1R NM_002062 exon6 c.T563A p.I188N CCTTCATCCTGCG . 146.0 42.0 92.0 0.0 . 659 GPATCH2 55105 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 217783743 217783743 + Splice_Site SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPATCH2 NM_018040 exon6 c.1019-1G>T . GGAAACCTGTAAA . 124.0 35.0 61.0 0.0 . 91 GPC4 2239 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 132458433 132458433 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPC4 NM_001448 exon3 c.G451T p.V151L CCACCACGTAGTA . 200.0 91.0 118.0 0.0 . 226 GPR110 266977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 46976727 46976727 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR110 NM_153840 exon11 c.A2444T p.Q815L AGATTCTGGCTGT . 457.0 122.0 275.0 0.0 . 71 GPR112 139378 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 135488040 135488040 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR112 NM_153834 exon23 c.A8844T p.L2948F ATTCTTACTTGGC . 157.0 26.0 76.0 0.0 . 183 GPR113 165082 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 26540974 26540974 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR113 NM_001145168 exon2 c.T196G p.C66G TGGGGCAGGCAGG . 96.0 45.0 128.0 2.0 . 94 GPR116 221395 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 46826559 46826559 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR116 NM_015234 exon17 c.G3081T p.L1027F GGCTGCCAAGCTC . 148.0 42.0 100.0 1.0 . 91 GPR123 84435 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 134910562 134910562 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR123 NM_001083909 exon3 c.C88A p.L30I ATGCTGCTCTGCC . 54.0 32.0 44.0 0.0 . 90 GPR133 283383 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 131456098 131456098 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR133 NM_198827 exon4 c.A283G p.S95G TGCATCAGCAAGC . 77.0 34.0 85.0 0.0 . 191 GPR22 2845 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 107114661 107114661 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR22 NM_005295 exon3 c.T156A p.I52I AGAAATTGTGTTG . 195.0 83.0 174.0 0.0 . 92 GPR45 11250 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 105858393 105858393 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR45 NM_007227 exon1 c.C78A p.S26S GGGGTCCACCCAG . 121.0 50.0 132.0 0.0 . 154 GPR89B 51463 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 147408746 147408746 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPR89B NM_016334 exon2 c.A48T p.L16L GATACTATTTTTT . 383.0 87.0 249.0 0.0 . 158 GPSM1 26086 broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 139231978 139231978 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GPSM1 NM_015597 exon5 c.A659G p.Y220C CCCACTATTTGTT . 157.0 73.0 189.0 1.0 . 90 GRIA2 2891 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 158142912 158142912 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRIA2 NM_000826 exon2 c.A182G p.H61R CACCCCACATCGA . 125.0 55.0 140.0 2.0 . 515 GRID2IP 392862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 6550307 6550307 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001145118 exon10 c.C1586A p.P529H ATCAGGGGAAGAG . 60.0 29.0 64.0 0.0 . . GRIK3 2899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 37315910 37315910 + Splice_Site SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRIK3 NM_000831 exon10 c.1326+2T>C . GCTCTTACCAGCA . 45.0 16.0 53.0 0.0 . 158 GRIK5 2901 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42510881 42510881 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRIK5 NM_002088 exon15 c.T1953C p.P651P CTCCACAGGCACC . 49.0 17.0 59.0 0.0 . 90 GRIP2 80852 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 14561754 14561754 + RNA SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRIP2 . . . . ATGGACAGGATGT . 76.0 55.0 86.0 1.0 . 69 GRK7 131890 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 141497734 141497734 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRK7 NM_139209 exon1 c.G608T p.G203V GTTTTGGGGAGGT . 170.0 70.0 193.0 1.0 . 522 GRM3 2913 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 86416372 86416372 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRM3 NM_000840 exon3 c.A1264G p.M422V GATGCTATGAAGA . 89.0 9.0 135.0 0.0 . 528 GRM4 2914 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 34003458 34003458 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRM4 NM_000841 exon9 c.A2429T p.Q810L GCCGACTGCGAGG . 377.0 69.0 228.0 0.0 . 525 GRM5 2915 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 88338049 88338049 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRM5 NM_000842 exon5 c.C1231A p.L411I TGTGGAGCCCATA . 117.0 52.0 140.0 0.0 . 949 GRXCR2 643226 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 5 145239349 145239349 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GRXCR2 NM_001080516 exon3 c.T694A p.C232S CAGGGCACCTCAG . 213.0 11.0 258.0 0.0 . 22 GSDMC 56169 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 130778031 130778031 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GSDMC NM_031415 exon4 c.T413C p.L138S GGATCCAACAGTT . 117.0 29.0 73.0 0.0 . 93 GTF3C1 2975 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27472839 27472839 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GTF3C1 NM_001520 exon37 c.G6162T p.K2054N CCTTGGCTTTCTC . 45.0 18.0 68.0 0.0 . 94 GTSE1 51512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 46719148 46719148 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . GTSE1 NM_016426 exon8 c.G1494T p.T498T GTGCACGTCAGTT . 57.0 23.0 82.0 0.0 . 187 HAS1 3036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 52219555 52219555 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HAS1 NM_001523 exon4 c.G1015T p.D339Y GCCGGTCATCCCC . 103.0 38.0 163.0 0.0 . 92 HDAC9 9734 broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 18705951 18705951 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HDAC9 NM_178425 exon11 c.A1583G p.N528S GTGGCAACAGCAC . 110.0 39.0 111.0 1.0 . 227 HECTD1 25831 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 14 31641123 31641123 + Nonsense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HECTD1 NM_015382 exon8 c.C1276T p.Q426X ACCTTTGACCTCT . 312.0 121.0 352.0 1.0 . 570 HECTD4 283450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 112688787 112688787 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001109662 exon24 c.A3302T p.K1101I AAAAGTTTGGACC . 127.0 58.0 158.0 0.0 . . HECW2 57520 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 197183894 197183894 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HECW2 NM_020760 exon9 c.G1720A p.D574N GCTGATCTACCTC . 101.0 39.0 108.0 0.0 . 668 HELZ2 85441 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 62203527 62203527 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001037335 exon2 c.A212T p.D71V GCCTGGTCGAAGG . 83.0 23.0 79.0 0.0 . . HIPK3 10114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 33358716 33358716 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HIPK3 NM_001048200 exon4 c.G1317T p.M439I AGATATGTCTCAT . 60.0 27.0 91.0 0.0 . 336 HIST1H2BJ 8970 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 27100194 27100194 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HIST1H2BJ NM_021058 exon1 c.G336T p.V112V CTCGGACACGGCG . 174.0 34.0 93.0 0.0 . 90 HIST1H3D 8351 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 26197264 26197264 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HIST1H3D NM_003530 exon2 c.T215G p.V72G TCACGGACTAGAC . 339.0 64.0 192.0 1.0 . 90 HKR1 284459 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 37854185 37854185 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HKR1 NM_181786 exon6 c.A1488T p.P496P GAAGCCATTTGTA . 128.0 50.0 103.0 0.0 . 92 HLA-DMB 3109 broad.mit.edu;bcgsc.ca 37 6 32905064 32905064 + Silent SNP A A G rs147622332 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HLA-DMB NM_002118 exon3 c.T507C p.N169N GTCTCCATTGGGC . 450.0 74.0 256.0 1.0 A|1.000;G|0.000 90 HMMR 3161 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 162900512 162900512 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HMMR NM_001142556 exon9 c.A853G p.K285E TTATCTAAACAAG . 313.0 136.0 349.0 2.0 . 90 HPS4 89781 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26860234 26860234 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HPS4 NM_022081 exon11 c.C1362G p.P454P GGGAATGGGGGCT . 52.0 20.0 82.0 0.0 . 90 HRH2 3274 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 175112498 175112498 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HRH2 NM_001131055 exon3 c.A1163T p.H388L ACATTCATCCAAT . 207.0 87.0 284.0 1.0 . 91 HRH4 59340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 22057255 22057255 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HRH4 NM_021624 exon3 c.T902C p.L301S GGAGATTAGCCAA . 142.0 55.0 172.0 0.0 . 92 HSPA13 6782 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 15746215 15746215 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HSPA13 NM_006948 exon5 c.A1139C p.K380T AGTATTTTCTGAA . 149.0 71.0 153.0 0.0 . 226 HSPA1L 3305 broad.mit.edu;ucsc.edu 37 6 31779395 31779395 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . HSPA1L NM_005527 exon2 c.G355T p.E119X TTTCCTCAGGGTA . 563.0 140.0 332.0 2.0 . 230 ICAM5 7087 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10404581 10404581 + Missense_Mutation SNP G G T rs147604357 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ICAM5 NM_003259 exon7 c.G1673T p.R558L ACCCTCGGGGCTC . 41.0 19.0 52.0 0.0 G|0.999;A|0.000 153 IFFO1 25900 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 6659920 6659920 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IFFO1 NM_001039670 exon3 c.G871A p.A291T TCAGTGCCAGCTC . 85.0 24.0 121.0 2.0 . 68 IFI35 3430 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 41166312 41166312 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IFI35 NM_005533 exon7 c.G863T p.G288V AGTCAGGCTAGGG . 52.0 29.0 80.0 0.0 . 91 IFIT5 24138 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 91174557 91174558 + Frame_Shift_Ins INS - - GA novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IFIT5 NM_012420 exon1 c.2_3insGA p.M1fs CCATCATGAGGTA . 78.0 45.0 40.0 0.0 . 90 IFNAR1 3454 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 34715660 34715660 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IFNAR1 NM_000629 exon4 c.A463T p.M155L AGTGTTATGTGGG . 113.0 48.0 98.0 0.0 . 91 IFT81 28981 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 110565247 110565247 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IFT81 NM_014055 exon2 c.A62G p.Y21C AGAACTATAATTT . 249.0 83.0 249.0 0.0 . 91 IGSF10 285313 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 151160801 151160801 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IGSF10 NM_178822 exon5 c.A5934G p.P1978P CTTGGATGGTAAC . 94.0 38.0 108.0 0.0 . 102 IGSF9B 22997 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 133807314 133807314 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IGSF9B NM_014987 exon5 c.C636T p.S212S CTGAATGCTGTAC . 83.0 28.0 104.0 0.0 . 68 IKBKB 3551 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 42171857 42171857 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IKBKB NM_001556 exon9 c.A710G p.Q237R TGCGGCAGAAGAG . 95.0 61.0 165.0 0.0 . 1164 IKZF1 10320 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 50467947 50467947 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IKZF1 NM_006060 exon8 c.C1182T p.C394C CAGCTGCCAAGAC . 87.0 43.0 115.0 0.0 . 1242 IL17C 27189 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 88705453 88705453 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IL17C NM_013278 exon2 c.T71A p.L24H CCTCCCTCAGGGG . 71.0 8.0 79.0 0.0 . 90 IL17RC 84818 ucsc.edu;bcgsc.ca 37 3 9974301 9974301 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IL17RC NM_153461 exon17 c.A1610G p.K537R TCCACAAGCGCTG . 151.0 129.0 214.0 2.0 . 92 IL18RAP 8807 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 103040730 103040730 + Missense_Mutation SNP A A T rs138125296 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IL18RAP NM_003853 exon5 c.A435T p.L145F GATTTTAGAAGTT . 177.0 79.0 161.0 0.0 A|1.000;G|0.000 95 IMPA2 3613 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 12009936 12009936 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IMPA2 NM_014214 exon3 c.C285A p.S95R CCACAGCCCGACG . 92.0 42.0 101.0 0.0 . 226 IMPG1 3617 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 76744355 76744355 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IMPG1 NM_001563 exon3 c.C451A p.L151M GATCCAGGTGCTC . 102.0 30.0 105.0 1.0 . 93 INPP4B 8821 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 142949992 142949992 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . INPP4B NM_003866 exon27 c.G2718T p.M906I GAAAGCCATCAGC . 89.0 47.0 115.0 0.0 . 228 INSRR 3645 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 156816454 156816454 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . INSRR NM_014215 exon8 c.A1667T p.Q556L GGCTCCTGGGTGC . 223.0 40.0 152.0 1.0 . 1403 INTS1 26173 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 1513873 1513873 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001080453 exon41 c.G5760T p.P1920P CACGTGCGGCTGC . 21.0 11.0 19.0 0.0 . . IRAK3 11213 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 66638446 66638446 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IRAK3 NM_007199 exon9 c.T1068A p.D356E AACAGATGTCTAC . 101.0 35.0 118.0 0.0 . 1379 IRGC 56269 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44223324 44223324 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IRGC NM_019612 exon2 c.C614A p.A205D GGGAGGCCGGCGT . 34.0 14.0 33.0 0.0 . 70 IRX1 79192 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 3600372 3600372 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IRX1 NM_024337 exon2 c.C1310A p.P437Q CGCTCCCAGGTAC . 37.0 17.0 37.0 0.0 . 228 ISLR2 57611 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 74426996 74426996 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ISLR2 NM_001130138 exon4 c.C1901G p.P634R AGGCCCCTGACCC . 89.0 40.0 112.0 0.0 . 90 ITGA11 22801 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 15 68609680 68609680 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ITGA11 NM_001004439 exon21 c.G2638T p.E880X CACACTCAATGCT . 101.0 39.0 130.0 0.0 . 538 ITGA9 3680 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 37774280 37774280 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ITGA9 NM_002207 exon19 c.A2145C p.S715S GAGGTCAAAGTCA . 74.0 63.0 92.0 0.0 . 715 ITPR3 3710 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 33646238 33646238 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ITPR3 NM_002224 exon29 c.A3689G p.Q1230R CGCACCAGTTCCT . 289.0 82.0 191.0 1.0 . 1085 IVL 3713 ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152883220 152883220 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . IVL NM_005547 exon2 c.T947A p.L316Q AGCACCTGGAGCA . 313.0 140.0 211.0 2.0 . 93 KAT6A 7994 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 41798813 41798813 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001099412 exon16 c.A2586G p.P862P CCGAGATGGCTGG . 33.0 24.0 84.0 1.0 . . KBTBD12 166348 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 127642796 127642796 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KBTBD12 NM_207335 exon1 c.A892T p.S298C GATGCCAGTTTTT . 131.0 60.0 162.0 0.0 . 23 KBTBD8 84541 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 67049479 67049479 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KBTBD8 NM_032505 exon2 c.C91T p.H31Y CCCTTCCATGCTT . 271.0 93.0 208.0 0.0 . 587 KCNA2 3737 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 111146974 111146974 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNA2 NM_001204269 exon3 c.A431T p.E144V TGAAACTCATTTT . 95.0 45.0 82.0 0.0 . 91 KCNA3 3738 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 111216207 111216207 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNA3 NM_002232 exon1 c.G1225T p.V409F GGATGACCCCAAT . 70.0 28.0 92.0 0.0 . 95 KCNAB1 7881 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 155838579 155838579 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNAB1 NM_172160 exon1 c.T179A p.L60Q GTCAACTGGCTCT . 132.0 53.0 138.0 1.0 . 94 KCNH1 3756 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 211192594 211192594 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNH1 NM_172362 exon6 c.T563A p.L188Q AGCTGTAGGACCT . 58.0 29.0 25.0 0.0 . 94 KCNK18 338567 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 118969679 118969679 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNK18 NM_181840 exon3 c.A1024G p.I342V TTCTCCATTTATA . 132.0 36.0 107.0 0.0 . 91 KCNQ3 3786 broad.mit.edu;bcgsc.ca 37 8 133141583 133141583 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCNQ3 NM_004519 exon15 c.G2545T p.G849C TGGAGCCGCTGGG . 166.0 46.0 78.0 2.0 . 138 KCP 375616 broad.mit.edu;ucsc.edu;mdanderson.org 37 7 128543812 128543812 + RNA SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCP . . . . GGCCTCAGCACTG . 157.0 61.0 168.0 0.0 . 68 KCTD1 284252 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 24126984 24126984 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KCTD1 NM_001142730 exon1 c.A1517T p.Q506L GGCGGCTGGGGGC . 26.0 15.0 26.0 0.0 . 91 KDR 3791 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 55973948 55973948 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KDR NM_002253 exon10 c.C1368G p.I456M CCAGTGGATGTGA . 115.0 43.0 154.0 0.0 . 2298 KERA 11081 broad.mit.edu;bcgsc.ca 37 12 91445249 91445249 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KERA NM_007035 exon3 c.A933C p.A311A TCGTTCTGCAGGC . 56.0 27.0 52.0 2.0 . 91 KIAA1024 23251 ucsc.edu;bcgsc.ca;mdanderson.org 37 15 79749155 79749155 + Missense_Mutation SNP C C A rs3750000 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIAA1024 NM_015206 exon2 c.C666A p.N222K CGAAAACGAGTCC . 138.0 59.0 131.0 1.0 C|0.960;T|0.040 183 KIAA1217 56243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 24833078 24833078 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIAA1217 NM_019590 exon19 c.A4879T p.R1627W ATCGCTAGGTCTC . 119.0 64.0 84.0 0.0 . 98 KIAA1549L 25758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 33628353 33628353 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_012194 exon13 c.A4155T p.A1385A ATCGGCAGTCCTC . 118.0 47.0 119.0 0.0 . . KIAA1551 55196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 32137297 32137297 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_018169 exon4 c.A3408G p.K1136K TCAGAAAGAAGAG . 90.0 35.0 101.0 0.0 . . KIAA1586 57691 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 56917944 56917944 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIAA1586 NM_020931 exon4 c.A647G p.H216R AAGCCCATGGTAA . 260.0 61.0 128.0 0.0 . 44 KIAA1804 0 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 233515084 233515084 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIAA1804 NM_032435 exon9 c.A2332T p.T778S CCTCCCACAAGCC . 299.0 64.0 193.0 2.0 . 523 KIF18A 81930 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 28119476 28119476 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF18A NM_031217 exon2 c.G19T p.D7Y ACAGGTCTTCCTC . 155.0 64.0 138.0 2.0 . 92 KIF1B 23095 broad.mit.edu;ucsc.edu 37 1 10363425 10363425 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF1B NM_183416 exon21 c.A2182T p.K728X GATTCCAAGTGGG . 334.0 141.0 381.0 2.0 . 93 KIF24 347240 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 34263160 34263160 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF24 NM_194313 exon9 c.G1454T p.C485F CGGATACATTCCT . 121.0 46.0 157.0 0.0 . 22 KIF26A 26153 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 104640574 104640574 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF26A NM_015656 exon11 c.C2120A p.A707D CGCCAGCCCAGCA . 88.0 41.0 127.0 1.0 . 24 KIF26B 55083 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 245772585 245772585 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF26B NM_018012 exon8 c.A1669T p.I557F ACCATGATCGGAA . 509.0 105.0 331.0 1.0 . 25 KIF4A 24137 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 69572476 69572476 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF4A NM_012310 exon14 c.A1458G p.A486A GGCTGCAGCCATT . 152.0 77.0 104.0 0.0 . 134 KIF6 221458 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 39387773 39387773 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIF6 NM_145027 exon15 c.T1761A p.S587S GGCTTCAGAAAAT . 170.0 37.0 98.0 1.0 . 713 KIT 3815 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 55564702 55564702 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KIT NM_000222 exon3 c.C590A p.S197X TGCTGTCGGAAAA . 75.0 34.0 100.0 0.0 . 20166 KITLG 4254 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 88910260 88910260 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KITLG NM_003994 exon5 c.A371G p.K124R GATTTTTTTAGAT . 44.0 22.0 69.0 0.0 . 227 KLC2 64837 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 66029592 66029592 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KLC2 NM_001134775 exon4 c.460-2A>T . CTTCCCAGGAGGA . 109.0 45.0 115.0 0.0 . 90 KLF17 128209 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 44595431 44595431 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KLF17 NM_173484 exon2 c.C488T p.S163F CGGCTTCCACTGG . 91.0 29.0 86.0 1.0 . 92 KLHL29 114818 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 23918605 23918605 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KLHL29 NM_052920 exon9 c.T1655A p.L552Q GGGACCTGGTGAA . 64.0 21.0 93.0 0.0 . 70 KRT23 25984 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39084545 39084545 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRT23 NM_015515 exon6 c.A866G p.E289G TTCAGTTCGTGGA . 57.0 28.0 89.0 0.0 . 91 KRT34 3885 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39538297 39538297 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRT34 NM_021013 exon1 c.G328A p.A110T AGCTGGCCAGGCG . 179.0 69.0 175.0 0.0 . 90 KRT5 3852 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 52913903 52913903 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRT5 NM_000424 exon1 c.T178A p.Y60N TGCCATAGCCACC . 68.0 26.0 81.0 0.0 . 90 KRTAP16-1 100505753 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 17 39464117 39464117 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001146182 exon1 c.C1389T p.C463C TTTTTTGCAATCC . 103.0 32.0 124.0 0.0 . . KRTAP29-1 100533177 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 17 39459055 39459055 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001257309 exon1 c.C49T p.P17S TGGTGGGCACAGC . 102.0 36.0 94.0 0.0 . . KRTAP4-6 81871 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39296524 39296524 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_030976 exon1 c.C216G p.T72T GCAGGTGGTCTGA . 45.0 19.0 47.0 0.0 . . KRTAP5-1 387264 broad.mit.edu;bcgsc.ca 37 11 1605913 1605913 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRTAP5-1 NM_001005922 exon1 c.T567C p.S189S CCCACAAGAACCG . 103.0 14.0 129.0 2.0 . 44 KRTAP5-3 387266 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 1629498 1629498 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRTAP5-3 NM_001012708 exon1 c.T118A p.C40S AGCAGCAGACAGG . 93.0 39.0 126.0 0.0 . 92 KRTAP5-6 440023 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 1718512 1718532 + In_Frame_Del DEL GGCTGTGGGGGCTGTGGCTCT GGCTGTGGGGGCTGTGGCTCT - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 GGCTGTGGGGGCTGTGGCTCT GGCTGTGGGGGCTGTGGCTCT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KRTAP5-6 NM_001012416 exon1 c.37_57del p.13_19del GGCTCCGGCTGTG . 142.0 44.0 159.0 0.0 . 90 KTN1 3895 ucsc.edu;bcgsc.ca 37 14 56079277 56079277 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . KTN1 NM_004986 exon2 c.A511G p.K171E AAGTCTAAAAATG . 231.0 94.0 221.0 2.0 . 1147 LAMB3 3914 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 209789949 209789949 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LAMB3 NM_000228 exon22 c.A3249T p.Q1083H ATACTTTTGTTTT . 281.0 50.0 205.0 0.0 . 156 LAMB4 22798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 107706917 107706917 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LAMB4 NM_007356 exon20 c.A2575T p.S859C GGCAGCTGGGAAA . 117.0 48.0 125.0 0.0 . 140 LAPTM5 7805 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 31215394 31215394 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LAPTM5 NM_006762 exon2 c.C90G p.I30M GCTCATGATCTGG . 59.0 27.0 102.0 0.0 . 226 LDB3 11155 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 88441277 88441277 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LDB3 NM_007078 exon4 c.C406A p.P136T GGCACCCCGGAGC . 63.0 19.0 35.0 0.0 . 92 LEPREL1 55214 broad.mit.edu;mdanderson.org 37 3 189838134 189838134 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LEPREL1 NM_018192 exon1 c.G387A p.G129G GGGGCCCCCGAGG . 24.0 8.0 25.0 0.0 . 155 LEPREL1 55214 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 189690681 189690681 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LEPREL1 NM_018192 exon11 c.T1681C p.C561R TTCGGCAGACCAT . 250.0 106.0 268.0 0.0 . 155 LGSN 51557 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 63990332 63990334 + In_Frame_Del DEL TCT TCT - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 TCT TCT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LGSN NM_016571 exon4 c.1122_1124del p.374_375del TTCAGGTCTTTCC . 78.0 39.0 75.0 0.0 . 227 LHX3 8022 broad.mit.edu;bcgsc.ca 37 9 139089345 139089345 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LHX3 NM_014564 exon6 c.A1035C p.P345P GGTGTCTGGGTAC . 63.0 31.0 69.0 2.0 . 91 LILRA3 11026 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 54803142 54803142 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LILRA3 NM_006865 exon4 c.C535T p.R179W TGGCCCGGGATGA . 130.0 47.0 174.0 1.0 . 91 LILRA3 11026 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 54803146 54803146 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LILRA3 NM_006865 exon4 c.A531G p.S177S CCGGGATGACCCA . 129.0 45.0 166.0 1.0 . 91 LILRA3 11026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 54803147 54803147 + Nonsense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LILRA3 NM_006865 exon4 c.C530G p.S177X CGGGATGACCCAC . 129.0 46.0 167.0 0.0 . 91 LILRB3 11025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 54721082 54721082 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LILRB3 NM_001081450 exon13 c.T1779C p.D593D GGTCACATCCTGG . 166.0 80.0 176.0 0.0 . 93 LIPI 149998 broad.mit.edu;ucsc.edu;bcgsc.ca 37 21 15516949 15516949 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LIPI NM_198996 exon9 c.A1353G p.P451P CCTTTCTGGGTAT . 229.0 80.0 229.0 1.0 . 70 LMBRD1 55788 hgsc.bcm.edu;bcgsc.ca 37 6 70411411 70411411 + Frame_Shift_Del DEL C C - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LMBRD1 NM_018368 exon11 c.1007delG p.G336fs TCTATTCCAGCTG . 242.0 99.0 213.0 0.0 . 91 LMX1B 4010 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 129455877 129455877 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LMX1B NM_001174146 exon5 c.A816T p.A272A AAGAGCAAAGGTA . 88.0 37.0 145.0 0.0 . 90 LOC284933 0 bcgsc.ca;mdanderson.org 37 22 48935257 48935257 + RNA SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . . . . . CTCTTGGCATCTG . 67.0 30.0 107.0 1.0 . . LOC389458 0 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 5112652 5112652 + RNA SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . . . . . CAGAAAGCCGGGG . 93.0 41.0 131.0 0.0 . . LRFN5 145581 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 42356398 42356398 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRFN5 NM_152447 exon3 c.C570A p.T190T GGGGACCTTCTCC . 91.0 38.0 86.0 0.0 . 97 LRIT1 26103 ucsc.edu;bcgsc.ca 37 10 85992413 85992413 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRIT1 NM_015613 exon4 c.G1142T p.R381M ACATGCCTGGCCA . 193.0 111.0 160.0 2.0 . 90 LRRC46 90506 broad.mit.edu;bcgsc.ca 37 17 45911898 45911898 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRC46 NM_033413 exon3 c.G224A p.G75E TGCAAGGGGTAAC . 90.0 7.0 113.0 1.0 . 91 LRRC4B 94030 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51022208 51022208 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRC4B NM_001080457 exon3 c.C762T p.S254S GCGCAGGCTGGTG . 66.0 21.0 77.0 0.0 . 205 LRRIQ1 84125 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 85518207 85518207 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRIQ1 NM_001079910 exon17 c.G3917T p.S1306I CAAGCAGTATTCC . 76.0 32.0 70.0 0.0 . 95 LRRIQ3 127255 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 74621535 74621535 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRIQ3 NM_001105659 exon4 c.G589A p.E197K TTTCCTCTTCATA . 347.0 135.0 327.0 0.0 . 92 LRRK1 79705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 101523888 101523888 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRK1 NM_024652 exon4 c.G417T p.L139F GGAATTGCTTGAG . 65.0 24.0 89.0 0.0 . 602 LRRK1 79705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 101595197 101595197 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRK1 NM_024652 exon27 c.C4101A p.A1367A AATAGCCTACCAG . 125.0 57.0 156.0 0.0 . 602 LRRK2 120892 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 40760830 40760830 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRRK2 NM_198578 exon50 c.G7413A p.L2471L CATGCTGGTATTG . 360.0 140.0 429.0 2.0 . 533 LRTM1 57408 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 54958771 54958771 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LRTM1 NM_020678 exon2 c.A479T p.Q160L TCAAGCTGCTGAA . 140.0 123.0 187.0 0.0 . 90 LTBP4 8425 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 41133127 41133127 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LTBP4 . . . . TGAGGACGATGGT . 44.0 13.0 45.0 0.0 . 93 LY9 4063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 160784465 160784465 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LY9 NM_001261457 exon4 c.T986C p.I329T TGAAGATAGAGGA . 265.0 163.0 164.0 1.0 . 91 LYPD5 284348 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44306498 44306498 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . LYPD5 NM_001031749 exon1 c.G35T p.C12F AAGAGGCAGAGCA . 38.0 15.0 68.0 0.0 . 90 MAB21L1 4081 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 36049699 36049699 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAB21L1 NM_005584 exon1 c.C577A p.P193T GCCAGGGGATGTG . 34.0 12.0 55.0 0.0 . 92 MAB21L2 10586 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 151504564 151504564 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAB21L2 NM_006439 exon1 c.T383C p.I128T GTAAGATCCGCTC . 58.0 20.0 55.0 0.0 . 91 MAEL 84944 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 166974609 166974609 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAEL NM_032858 exon8 c.A820C p.M274L GTGGCCATGTGGG . 407.0 20.0 249.0 1.0 . 91 MAGEB5 347541 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 X 26235588 26235588 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAGEB5 NM_001271752 exon2 c.T170C p.M57T TCAAAATGAAACA . 132.0 111.0 124.0 0.0 . 109 MAGEC3 139081 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 140969387 140969387 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAGEC3 NM_138702 exon4 c.C714T p.G238G TTTTGGCATTTCC . 141.0 60.0 89.0 0.0 . 555 MAGEE2 139599 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 75004449 75004449 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAGEE2 NM_138703 exon1 c.T438C p.V146V ATCAATAACTCTC . 112.0 49.0 74.0 1.0 . 132 MALT1 10892 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 56414872 56414872 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MALT1 NM_006785 exon17 c.A2273G p.H758R CATTCCATGGTGT . 95.0 30.0 95.0 1.0 . 660 MAML3 55534 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 140651774 140651774 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAML3 NM_018717 exon4 c.C2115A p.S705S CACGGAGGACTGC . 112.0 65.0 97.0 0.0 . 455 MAP2 4133 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 210557752 210557752 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAP2 NM_002374 exon7 c.T858A p.P286P ATCTCCTGGCCCT . 141.0 60.0 165.0 0.0 . 591 MAP3K12 7786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53878895 53878895 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MAP3K12 NM_001193511 exon6 c.C1084T p.L362L CGGGCAGATGGAG . 123.0 52.0 126.0 0.0 . 604 MARS2 92935 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 198570872 198570872 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MARS2 NM_138395 exon1 c.A743T p.E248V TGGACGAGGAGCT . 106.0 43.0 122.0 2.0 . 92 MBL2 4153 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 54528161 54528161 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MBL2 NM_000242 exon4 c.T483G p.S161S GGCCACAGAGGCC . 153.0 46.0 144.0 0.0 . 91 MC5R 4161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 13826194 13826194 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MC5R NM_005913 exon1 c.A430C p.I144L GTCACCATCTTCT . 84.0 32.0 105.0 0.0 . 526 MCF2 4168 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 138701843 138701843 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MCF2 NM_001171876 exon10 c.T890A p.L297Q TTTAATAGAAATT . 784.0 347.0 430.0 2.0 . 227 MCM9 254394 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 119136767 119136767 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MCM9 NM_017696 exon12 c.A2652G p.P884P TCTGTCTGGGCTA . 47.0 17.0 84.0 0.0 . 515 MED13L 23389 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 116446847 116446847 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MED13L NM_015335 exon10 c.A1371G p.S457S TAAAGATGAAGAT . 123.0 41.0 122.0 0.0 . 232 MEFV 4210 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 3306451 3306451 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MEFV NM_000243 exon1 c.A137T p.Q46L GCTCTCTGGATCT . 138.0 67.0 136.0 1.0 . 228 MEN1 4221 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 64575092 64575092 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MEN1 NM_130800 exon4 c.A730G p.M244V ACACCATGAACGC . 42.0 31.0 99.0 0.0 . 3017 MEP1B 4225 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 29793483 29793483 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MEP1B NM_005925 exon11 c.A1540C p.N514H ATGTCCAATCAGC . 89.0 35.0 89.0 0.0 . 92 METTL13 51603 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 171753199 171753199 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . METTL13 NM_015935 exon2 c.G473T p.C158F ATCTCTGCATCTC . 190.0 49.0 112.0 0.0 . 91 MFAP4 4239 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 19289686 19289686 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MFAP4 NM_001198695 exon3 c.C249G p.P83P GCCCGAGGGGTAG . 137.0 59.0 137.0 0.0 . 514 MGAM 8972 broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 141752594 141752594 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MGAM NM_004668 exon26 c.C2969T p.S990F CCAATTCTTCTGG . 96.0 34.0 111.0 1.0 . 70 MGAM 8972 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 141755835 141755835 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MGAM NM_004668 exon29 c.C3519T p.Y1173Y CTACTACATGGGG . 54.0 19.0 70.0 0.0 . 70 MGAM 8972 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 141764190 141764190 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MGAM NM_004668 exon37 c.A4352G p.E1451G ATTTGGAGTCCAG . 70.0 29.0 100.0 0.0 . 70 MGAT5B 146664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74921070 74921070 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MGAT5B NM_198955 exon8 c.C1081A p.R361R CCAGGCCGGGGAA . 54.0 20.0 78.0 0.0 . 93 MICALL1 85377 broad.mit.edu;ucsc.edu;bcgsc.ca 37 22 38321666 38321666 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MICALL1 NM_033386 exon8 c.1083-2A>T . TCCTCCAGGACAC . 111.0 46.0 149.0 1.0 . 153 MIR206 406989 broad.mit.edu;ucsc.edu;mdanderson.org 37 6 52009189 52009189 + RNA SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . . . . . ATGGATTACTTTG . 194.0 37.0 149.0 1.0 . . MKL2 57496 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 14341108 14341108 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MKL2 NM_014048 exon12 c.C1991T p.P664L GCCAGCCCGTCTC . 72.0 26.0 99.0 0.0 . 95 MLL2 8085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 49432023 49432023 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MLL2 NM_003482 exon34 c.A9116G p.D3039G AGGTCATCCAAGT . 138.0 59.0 143.0 0.0 . 612 MLX 6945 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 40721541 40721541 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MLX NM_170607 exon6 c.G555T p.Q185H CATTCAGTTTTTG . 79.0 32.0 83.0 0.0 . 90 MOV10L1 54456 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 50580530 50580530 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MOV10L1 NM_018995 exon16 c.C2091T p.D697D GACGGACCAAGCT . 79.0 37.0 85.0 0.0 . 93 MPHOSPH10 10199 ucsc.edu;bcgsc.ca 37 2 71376544 71376544 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MPHOSPH10 NM_005791 exon10 c.A1857G p.L619L GAAGTTAAAACAG . 468.0 185.0 483.0 2.0 . 93 MROH5 389690 broad.mit.edu;ucsc.edu;mdanderson.org 37 8 142444651 142444651 + RNA SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . . . . . GCTTACTGCGGAA . 52.0 12.0 30.0 0.0 . . MRPS27 23107 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 71519592 71519592 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MRPS27 NM_015084 exon10 c.A923T p.Q308L GACCCCTGGTTGT . 97.0 48.0 121.0 0.0 . 90 MTMR11 10903 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 149902441 149902441 + Splice_Site SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MTMR11 NM_181873 exon15 c.1249-2A>G . TTTAACTGGACAG . 76.0 11.0 35.0 0.0 . 90 MTUS2 23281 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 30066785 30066785 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MTUS2 NM_001033602 exon10 c.T3538C p.L1180L CCAGAATTGATGT . 98.0 35.0 99.0 0.0 . 218 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9048117 9048117 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MUC16 NM_024690 exon5 c.A33514G p.I11172V AAGAAATAGTCAG . 71.0 28.0 112.0 0.0 . 566 MUC21 394263 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30955854 30955854 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MUC21 NM_001010909 exon3 c.A1584C p.P528P TGGTCCAGGCCCT . 255.0 42.0 189.0 0.0 . 92 MUC2 4583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 1087958 1087958 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MUC2 NM_002457 exon25 c.T3433C p.C1145R GAGACCTGCAGGA . 61.0 25.0 94.0 0.0 . 90 MUC6 4588 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 11 1031239 1031239 + Nonsense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MUC6 NM_005961 exon5 c.C504G p.Y168X ACCCATGTACTTC . 124.0 51.0 121.0 0.0 . 23 MURC 347273 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 103348527 103348527 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MURC NM_001018116 exon2 c.A889G p.I297V GACATCATTGCCA . 120.0 50.0 153.0 1.0 . 69 MX2 4600 broad.mit.edu;ucsc.edu;bcgsc.ca 37 21 42762601 42762601 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MX2 NM_002463 exon6 c.A842T p.E281V CCCATGAGGTGGA . 81.0 38.0 112.0 2.0 . 92 MYH13 8735 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 10212854 10212854 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYH13 NM_003802 exon34 c.C4950G p.V1650V GCCCTGGACCGTG . 47.0 21.0 49.0 0.0 . 6 MYH4 4622 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 10351254 10351254 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYH4 NM_017533 exon34 c.C4846A p.L1616M TCCTCAGAGCATC . 155.0 55.0 191.0 1.0 . 102 MYH6 4624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23865974 23865974 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYH6 NM_002471 exon19 c.A2221C p.R741R CCTTCCTGCTATC . 110.0 40.0 124.0 0.0 . 94 MYH7 4625 ucsc.edu;bcgsc.ca 37 14 23901694 23901694 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYH7 NM_000257 exon6 c.T524G p.L175R GTGATCAGGATGG . 121.0 52.0 148.0 2.0 . 94 MYO15A 51168 broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 18061879 18061879 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYO15A NM_016239 exon51 c.G9010T p.A3004S GAGGACGCCCTGG . 190.0 80.0 203.0 2.0 . 97 MYO1D 4642 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 31048069 31048069 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYO1D NM_015194 exon15 c.C1885T p.R629C TCTGGCGGAAGGC . 125.0 10.0 155.0 0.0 . 137 MYO3A 53904 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 26465717 26465717 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYO3A NM_017433 exon31 c.G4381T p.G1461C TATCTGGGTGTCT . 98.0 5.0 87.0 0.0 . 1007 MYO3A 53904 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 26377316 26377316 + Missense_Mutation SNP G G T rs200209381 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYO3A NM_017433 exon15 c.G1544T p.R515L AATCCCGAGTTAT . 166.0 42.0 106.0 0.0 G|0.999;A|0.000 1007 MYT1 4661 broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 62844964 62844964 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYT1 NM_004535 exon10 c.C1595A p.P532H GAGATCCTTCCAA . 59.0 33.0 64.0 1.0 . 704 MYT1L 23040 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 1983303 1983303 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . MYT1L NM_015025 exon7 c.G79T p.E27X ACAGCTCTTGTAT . 92.0 32.0 141.0 0.0 . 95 NABP2 79035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 56619991 56619991 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_024068 exon5 c.A319G p.N107D GTTCCTAACTTCA . 165.0 65.0 188.0 0.0 . . NACA2 342538 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 17 59667968 59667968 + Nonsense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NACA2 NM_199290 exon1 c.A574T p.R192X TTGCTCTCGACAC . 110.0 43.0 109.0 0.0 . 91 NANOS3 342977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 13988465 13988465 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NANOS3 NM_001098622 exon1 c.T403A p.Y135N CAGGGCTACACCT . 52.0 29.0 77.0 0.0 . 69 NANP 140838 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 25596957 25596957 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NANP NM_152667 exon2 c.G351T p.M117I AGTAAGCATGGCT . 89.0 37.0 121.0 0.0 . 90 NAV3 89795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 78513452 78513452 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NAV3 NM_014903 exon15 c.C3476G p.T1159S CCAGTACCAGCAG . 132.0 56.0 169.0 0.0 . 279 NBEA 26960 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 35729982 35729982 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NBEA NM_015678 exon19 c.T2517A p.I839I GAAAATTCAGAAT . 90.0 18.0 62.0 0.0 . 144 NBEAL2 23218 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 47042832 47042832 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NBEAL2 NM_015175 exon29 c.G4548T p.L1516L GGTCCTGGCCAGC . 41.0 36.0 56.0 0.0 . 69 NBR1 4077 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 41349033 41349033 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NBR1 NM_031862 exon16 c.A1936G p.T646A AGTGGGACCCAGT . 187.0 11.0 201.0 0.0 . 130 NCOA6 23054 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 20 33324500 33324500 + Nonsense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NCOA6 NM_014071 exon12 c.A5956T p.R1986X CTGGTCTGGCAAC . 123.0 54.0 146.0 0.0 . 292 NCSTN 23385 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 160314603 160314606 + Frame_Shift_Del DEL GATT GATT - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 GATT GATT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NCSTN NM_015331 exon2 c.177_180del p.59_60del TCATCAGATTGGC . 183.0 116.0 124.0 0.0 . 658 NEB 4703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 152522831 152522831 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NEB NM_004543 exon41 c.T4804A p.Y1602N TCATGTAGTGAAC . 86.0 34.0 93.0 0.0 . 145 NEBL 10529 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 21120179 21120179 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NEBL NM_006393 exon16 c.C1617A p.S539R ATCCATGCTCACT . 69.0 38.0 77.0 1.0 . 92 NEBL 10529 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 21178773 21178773 + Splice_Site SNP C C A rs139581346 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NEBL NM_006393 exon4 c.258+1G>T . ACCTTACCTCAGA . 299.0 170.0 209.0 0.0 C|0.999;T|0.001 92 NEO1 4756 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 73564819 73564819 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NEO1 NM_001172623 exon19 c.G2881C p.V961L AAGGATGTGACTG . 91.0 35.0 123.0 0.0 . 116 NES 10763 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 156641502 156641502 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NES NM_006617 exon4 c.A2478T p.L826L TGATTCTAGGATC . 194.0 126.0 130.0 1.0 . 520 NEURL1B 54492 broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 172097160 172097160 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001142651 exon2 c.A404T p.E135V TGCCCGAGAACCT . 13.0 4.0 27.0 0.0 . . NFAT5 10725 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 16 69703941 69703943 + In_Frame_Del DEL AGA AGA - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 AGA AGA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NFAT5 NM_001113178 exon8 c.1431_1433del p.477_478del GAAAGGAGAAGAA . 235.0 85.0 308.0 0.0 . 90 NLGN4X 57502 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 6069058 6069058 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NLGN4X NM_181332 exon2 c.C450A p.N150K GTAGATGTTTAAG . 51.0 41.0 74.0 0.0 . 195 NLRP10 338322 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 7981937 7981937 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NLRP10 NM_176821 exon2 c.A1222T p.R408W GGACCCTGTGCCG . 57.0 23.0 57.0 0.0 . 209 NME1 4830 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 49239133 49239133 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NME1 NM_198175 exon6 c.A461T p.E154V AGAAGGAGATCGG . 104.0 53.0 131.0 0.0 . 251 NOL6 65083 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 33469275 33469275 + Silent SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NOL6 NM_022917 exon6 c.G792C p.P264P GCGGCACGGGCGG . 98.0 45.0 116.0 0.0 . 92 NOS1 4842 broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 117710243 117710243 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NOS1 NM_000620 exon10 c.A1786G p.T596A TCTCTGTGCCCAT . 130.0 56.0 141.0 1.0 . 154 NOSTRIN 115677 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 169681160 169681160 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NOSTRIN NM_001039724 exon3 c.A130C p.S44R GAAATTAGCTATG . 600.0 221.0 701.0 0.0 . 90 NOTCH3 4854 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 15281192 15281192 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NOTCH3 NM_000435 exon27 c.T5064C p.S1688S GTGACCAGAGGCC . 51.0 24.0 86.0 0.0 . 855 NOVA2 4858 broad.mit.edu;mdanderson.org 37 19 46444123 46444123 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NOVA2 NM_002516 exon4 c.G477A p.Q159Q TCCTGACTGTTCC . 10.0 3.0 32.0 0.0 . 226 NPAP1 23742 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 24921224 24921224 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_018958 exon1 c.G210T p.R70S TAAGAGGCCGTGT . 46.0 21.0 39.0 0.0 . . NPAP1 23742 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 24921716 24921716 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_018958 exon1 c.G702A p.L234L CTGCTTGGAAGGC . 61.0 32.0 57.0 0.0 . . NPAS3 64067 broad.mit.edu;ucsc.edu 37 14 34270267 34270267 + Nonsense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NPAS3 NM_001164749 exon12 c.C2754G p.Y918X CGTCTACAGCAAC . 100.0 36.0 116.0 1.0 . 93 NPAS3 64067 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 34269082 34269082 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NPAS3 NM_001164749 exon12 c.G1569C p.P523P TAACCCGGACAGC . 121.0 54.0 152.0 0.0 . 93 NRCAM 4897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 107820770 107820770 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NRCAM NM_001037132 exon22 c.G2748A p.P916P TAGCCCCGGCAAC . 104.0 62.0 105.0 0.0 . 156 NRDE2 55051 ucsc.edu;bcgsc.ca 37 14 90744720 90744720 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_017970 exon14 c.G3455T p.R1152L GGCAGGCGCACCC . 106.0 42.0 141.0 2.0 . . NRXN1 9378 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 50149221 50149221 + Nonsense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NRXN1 NM_001135659 exon24 c.C4505A p.S1502X TGGTATGAGCCTT . 125.0 53.0 126.0 0.0 . 92 NSMCE1 197370 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27268833 27268833 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NSMCE1 NM_145080 exon2 c.A59G p.Q20R AGCAACTGGAGGA . 106.0 49.0 146.0 0.0 . 90 NSUN4 387338 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 46810731 46810732 + Frame_Shift_Ins INS - - T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NSUN4 NM_199044 exon2 c.352_353insT p.P118fs GCAGCCCCATCCC . 82.0 34.0 74.0 0.0 . 90 NTRK3 4916 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 88472454 88472454 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NTRK3 NM_001012338 exon17 c.T2101A p.S701T CTCTGGACATGCC . 162.0 70.0 197.0 0.0 . 3538 NUDC 10726 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 27268120 27268120 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NUDC NM_006600 exon3 c.A332G p.E111G ATGAAGAGGCAGA . 175.0 15.0 200.0 0.0 . 91 NUP153 9972 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 17706588 17706588 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NUP153 NM_005124 exon1 c.G31T p.G11C CACCGCCCCCTCC . 87.0 9.0 57.0 0.0 . 637 NUP210 23225 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 13401819 13401819 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NUP210 NM_024923 exon15 c.A2105G p.N702S TGATAATTCCGGG . 115.0 101.0 161.0 0.0 . 256 NYNRIN 57523 broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 24882219 24882219 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . NYNRIN NM_025081 exon7 c.G2659A p.A887T AAGCTGGCAGAGG . 102.0 47.0 152.0 1.0 . 3 OBSCN 84033 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 228462464 228462464 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OBSCN NM_001271223 exon24 c.G7000T p.D2334Y ATCTCAGACCTGG . 96.0 16.0 73.0 0.0 . 403 OBSCN 84033 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 228559946 228559946 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OBSCN NM_001271223 exon105 c.A24338T p.E8113V AGGCTGAGGATCT . 192.0 39.0 113.0 0.0 . 403 OLFML2A 169611 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 127549471 127549471 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OLFML2A NM_182487 exon2 c.A308G p.E103G AGAACGAGTGGAA . 70.0 35.0 76.0 0.0 . 68 OPA1 4976 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 193332727 193332727 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OPA1 NM_130832 exon2 c.A248T p.Q83L GCTACCAGCCTCG . 246.0 17.0 280.0 0.0 . 68 OPA1 4976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 193374929 193374929 + Nonsense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OPA1 NM_130837 exon23 c.G2239T p.E747X GGGAAAGAGCATG . 131.0 64.0 191.0 0.0 . 68 OR10A5 144124 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6867208 6867208 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR10A5 NM_178168 exon1 c.G295T p.A99S GGCTGTGCCACTC . 222.0 92.0 237.0 0.0 . 71 OR10Z1 128368 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 158577013 158577013 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR10Z1 NM_001004478 exon1 c.C785A p.P262H TGAGGCCCAAAGC . 231.0 45.0 125.0 2.0 . 70 OR14A16 284532 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 247978552 247978552 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR14A16 NM_001001966 exon1 c.C480A p.G160G GAAGGTGCCAGCT . 230.0 52.0 129.0 1.0 . 46 OR1A1 8383 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 17 3119514 3119514 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR1A1 NM_014565 exon1 c.C600A p.Y200X GATGTACCTAGGG . 85.0 36.0 99.0 0.0 . 70 OR2A12 346525 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 143792917 143792917 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2A12 NM_001004135 exon1 c.C717A p.T239T CTCTACCTGCTCC . 136.0 44.0 173.0 0.0 . 92 OR2AG1 144125 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6806883 6806883 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2AG1 NM_001004489 exon1 c.C615T p.T205T TGTGACCTTCCTG . 104.0 43.0 83.0 0.0 . 68 OR2F1 26211 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 143657623 143657623 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2F1 NM_012369 exon1 c.T560A p.L187Q TCAGGCTGGCTTG . 161.0 56.0 172.0 0.0 . 71 OR2G3 81469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 247769234 247769234 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2G3 NM_001001914 exon1 c.C347A p.A116D TCTTGGCTGACAT . 288.0 202.0 186.0 1.0 . 68 OR2G6 391211 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 248685871 248685871 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2G6 NM_001013355 exon1 c.T924C p.S308S GGGTAGTGCTGCT . 74.0 8.0 37.0 0.0 . 71 OR2M3 127062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 248366439 248366439 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2M3 NM_001004689 exon1 c.C70T p.H24Y CCCACCCACACCT . 563.0 114.0 339.0 0.0 . 70 OR2M7 391196 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 248487089 248487089 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR2M7 NM_001004691 exon1 c.A782T p.Q261L GTGGGCTGAATGC . 374.0 82.0 249.0 1.0 . 70 OR4D2 124538 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 56247411 56247411 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR4D2 NM_001004707 exon1 c.A395G p.Y132C TCCGCTATGTCAC . 73.0 28.0 74.0 0.0 . 114 OR4K17 390436 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 20586546 20586546 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR4K17 NM_001004715 exon1 c.A981C p.I327I GAAGATATCCATG . 70.0 33.0 99.0 1.0 . 71 OR51L1 119682 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 5020779 5020779 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR51L1 NM_001004755 exon1 c.A567G p.L189L AAGATTATCCTGT . 127.0 55.0 168.0 2.0 . 69 OR51V1 283111 ucsc.edu;bcgsc.ca 37 11 5221747 5221747 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR51V1 NM_001004760 exon1 c.C184A p.P62T GGCTTGGCTCAGT . 88.0 36.0 136.0 2.0 . 69 OR56A5 390084 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 11 5988980 5988980 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001146033 exon1 c.A745T p.I249F TGAGGATGAAGTG . 157.0 63.0 195.0 0.0 . . OR6B1 135946 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 143701238 143701238 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR6B1 NM_001005281 exon1 c.T149A p.L50Q TGGTGCTGCAAAA . 165.0 64.0 204.0 0.0 . 91 OR6K2 81448 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 158669520 158669520 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR6K2 NM_001005279 exon1 c.A923G p.Q308R TTAGCTTGACCTA . 437.0 84.0 229.0 1.0 . 69 OR6T1 219874 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 123814484 123814484 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR6T1 NM_001005187 exon1 c.A62T p.H21L ATGAGGTGGCTAC . 104.0 50.0 137.0 1.0 . 69 OR8G2 26492 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 124095466 124095466 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001007249 exon1 c.T69A p.T23T AGTGACTGAGTTC . 126.0 53.0 168.0 0.0 . . OR8H2 390151 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55873220 55873220 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR8H2 NM_001005200 exon1 c.G702T p.K234N AGGAAAGCAGAAA . 182.0 73.0 157.0 1.0 . 70 OR8J3 81168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55904587 55904587 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR8J3 NM_001004064 exon1 c.C608A p.A203E GTTGCTGCAGATA . 76.0 33.0 53.0 0.0 . 70 OR8J3 81168 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55904573 55904573 + Missense_Mutation SNP C C A rs1384094 byfrequency TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR8J3 NM_001004064 exon1 c.G622T p.V208F AAAAAACCAAATT . 84.0 36.0 48.0 0.0 C|0.992;A|0.008 70 OR8K1 390157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 56113774 56113774 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OR8K1 NM_001002907 exon1 c.T260A p.M87K CGAAGATGTTAGT . 149.0 53.0 145.0 0.0 . 70 OSGIN1 29948 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 83998905 83998905 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OSGIN1 NM_182981 exon6 c.G727A p.V243I AACGTGGTCCTCG . 35.0 15.0 42.0 0.0 . 68 OSR1 130497 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 19552136 19552136 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OSR1 NM_145260 exon3 c.A701G p.Q234R CACTCTTGACACT . 115.0 48.0 108.0 0.0 . 257 OTOGL 283310 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 80750668 80750668 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_173591 exon48 c.A5966T p.E1989V AGGAAGAACCTTG . 269.0 120.0 247.0 1.0 . . OXGR1 27199 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 97639601 97639601 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . OXGR1 NM_080818 exon4 c.C413A p.P138Q CTCATTGGGTGAA . 107.0 41.0 150.0 1.0 . 70 P2RY10 27334 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 78216943 78216943 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . P2RY10 NM_198333 exon2 c.C926A p.A309D TTATGGCTTCAGA . 188.0 84.0 125.0 0.0 . 542 P2RY6 5031 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 73007940 73007940 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . P2RY6 NM_176796 exon4 c.T377A p.L126Q GCTACCTGGGCAT . 38.0 8.0 25.0 0.0 . 501 PABPC4L 132430 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 135121999 135121999 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001114734 exon2 c.T350A p.L117X AGCTGCAAGAAGT . 71.0 31.0 78.0 0.0 . . PAK7 57144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9525119 9525119 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PAK7 NM_177990 exon8 c.T1766C p.F589S GCACAGAAACCAA . 139.0 48.0 169.0 0.0 . 1434 PARD3 56288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 34759158 34759158 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PARD3 NM_001184788 exon4 c.C437T p.P146L AGAGCTGGGTCAC . 130.0 34.0 117.0 0.0 . 92 PARD3B 117583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 206036933 206036933 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PARD3B NM_057177 exon12 c.1621-2A>T . TGCCTTAGGATGG . 128.0 50.0 148.0 0.0 . 140 PCBP3 54039 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47320533 47320533 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCBP3 NM_001130141 exon4 c.A218G p.E73G TGCGTGAGGAGGT . 222.0 66.0 308.0 1.0 . 227 PCDH11X 27328 hgsc.bcm.edu;broad.mit.edu 37 X 91131828 91131828 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDH11X NM_001168363 exon2 c.A589T p.K197X GGAGACAAGATGC . 554.0 238.0 333.0 1.0 . 193 PCDH11X 27328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 91873264 91873264 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDH11X NM_032968 exon7 c.T3369A p.A1123A AACAGCTGCAGAA . 245.0 116.0 112.0 0.0 . 193 PCDHA3 56145 broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 140183244 140183244 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHA3 NM_031497 exon1 c.T2462A p.L821Q CTCCTCTGGAAAT . 93.0 36.0 82.0 1.0 . 98 PCDHA5 56143 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 140202294 140202294 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHA5 NM_018908 exon1 c.T934G p.Y312D GAAGACTATAACT . 147.0 60.0 150.0 1.0 . 137 PCDHAC1 56135 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140308412 140308412 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHAC1 NM_031882 exon1 c.A1935G p.P645P CCCACCACTTTCC . 74.0 23.0 74.0 0.0 . 28 PCDHB10 56126 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140572771 140572771 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHB10 NM_018930 exon1 c.G646T p.D216Y GCGCTGGATGGTG . 133.0 51.0 147.0 0.0 . 92 PCDHB6 56130 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140531986 140531986 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHB6 NM_018939 exon1 c.G2148T p.R716S GAGCAGGGCGGCC . 45.0 22.0 57.0 0.0 . 91 PCDHB7 56129 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140553027 140553027 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHB7 NM_018940 exon1 c.A611T p.E204V GGGAAGAGATACC . 168.0 91.0 161.0 0.0 . 95 PCDHGA3 56112 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 140723872 140723872 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCDHGA3 NM_032011 exon1 c.A272C p.D91A GGATAGACCGGGA . 142.0 54.0 164.0 1.0 . 68 PCLO 27445 broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 82580709 82580709 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCLO NM_014510 exon6 c.A9195T p.T3065T TCTTGCTGTGGAA . 93.0 45.0 125.0 1.0 . 29 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 82467649 82467649 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCLO NM_014510 exon15 c.A14107G p.N4703D CATAGTTAATTTG . 66.0 22.0 72.0 0.0 . 29 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 82581285 82581285 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCLO NM_014510 exon5 c.C8984A p.S2995Y GTGTCAGACATGG . 168.0 85.0 161.0 0.0 . 29 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 82764725 82764725 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PCLO NM_014510 exon3 c.G2141T p.G714V GGAGAGCCATGAA . 151.0 71.0 167.0 0.0 . 29 PDGFRA 5156 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 55152024 55152024 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PDGFRA NM_006206 exon18 c.T2456G p.L819R GTGATCTGGCTGC . 52.0 21.0 51.0 1.0 . 9497 PDPR 55066 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 70190550 70190550 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PDPR NM_017990 exon19 c.C2408A p.A803D GCAGTGCCTACAG . 83.0 34.0 111.0 1.0 . 135 PEF1 553115 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 32101091 32101091 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PEF1 NM_012392 exon2 c.A57T p.G19G AGGGGCTCCTGGT . 270.0 105.0 308.0 0.0 . 68 PEG3 5178 hgsc.bcm.edu;broad.mit.edu 37 19 57327366 57327366 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PEG3 NM_001146184 exon9 c.A2444G p.H815R CTCTGATGGTTGA . 148.0 6.0 177.0 0.0 . 164 PENK 5179 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 57354153 57354153 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PENK NM_001135690 exon4 c.T482A p.L161Q GTTTCCAGAAGCT . 202.0 26.0 173.0 1.0 . 517 PHACTR3 116154 broad.mit.edu;bcgsc.ca 37 20 58180075 58180075 + Silent SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PHACTR3 NM_080672 exon1 c.C6G p.A2A CATGGCCGCGTCG . 18.0 6.0 22.0 0.0 . 93 PHC1 1911 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 9083485 9083485 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PHC1 NM_004426 exon7 c.C1067A p.T356K CACGGACAGCCAC . 121.0 36.0 79.0 0.0 . 154 PHF3 23469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 64389990 64389990 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PHF3 NM_015153 exon2 c.A334T p.R112W CCTAACAGGAACT . 124.0 60.0 149.0 0.0 . 229 PHF6 84295 ucsc.edu;bcgsc.ca;mdanderson.org 37 X 133547942 133547942 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PHF6 NM_032335 exon7 c.A678G p.R226R AGCACGAGGAAAA . 631.0 311.0 342.0 2.0 . 131 PHKB 5257 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 47622887 47622887 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PHKB NM_000293 exon10 c.C942G p.S314R TTTTAGCCAGACA . 73.0 26.0 68.0 0.0 . 154 PIK3R2 5296 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 18273890 18273890 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PIK3R2 NM_005027 exon10 c.A1223G p.E408G GCCACGAGTCTCT . 147.0 50.0 178.0 0.0 . 1311 PIP5K1B 8395 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 71555562 71555562 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PIP5K1B NM_003558 exon14 c.C1358A p.A453D TCCTAGCCCTGGG . 147.0 64.0 146.0 0.0 . 240 PKHD1L1 93035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 110509272 110509272 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PKHD1L1 NM_177531 exon64 c.C10452G p.C3484W GACATGCTGGGAT . 318.0 68.0 140.0 0.0 . 145 PLA2G3 50487 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 31533830 31533830 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLA2G3 NM_015715 exon4 c.G932T p.G311V GGTGGCCCCTTCC . 90.0 37.0 144.0 0.0 . 226 PLCB4 5332 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9288511 9288511 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLCB4 NM_182797 exon2 c.T50G p.L17W CCTTTTTGCAAGA . 80.0 51.0 80.0 0.0 . 274 PLCB4 5332 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9352961 9352961 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLCB4 NM_182797 exon9 c.T597A p.I199I TGAAATTGAGCCC . 165.0 80.0 186.0 0.0 . 274 PLCXD2 257068 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 111394182 111394182 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLCXD2 NM_001185106 exon1 c.C90A p.V30V GGAGGTCTGCAAT . 213.0 91.0 266.0 0.0 . 227 PLD1 5337 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 171395376 171395376 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLD1 NM_002662 exon17 c.A1976G p.Q659R TCAAGTTGAACCC . 113.0 56.0 147.0 0.0 . 660 PLIN4 729359 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4510630 4510630 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLIN4 NM_001080400 exon3 c.G3300T p.K1100N AAGGCCCTTGGTA . 63.0 30.0 65.0 0.0 . 68 PLXNA4 91584 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 131908376 131908376 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PLXNA4 NM_020911 exon9 c.A2007G p.P669P GCGGTATGGACTC . 84.0 50.0 135.0 0.0 . 91 PNMAL1 55228 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 46974216 46974216 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PNMAL1 NM_018215 exon2 c.T77C p.L26S GTGACCAACAAGG . 101.0 38.0 109.0 2.0 . 68 PNPLA1 285848 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 36238348 36238348 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PNPLA1 NM_001145717 exon1 c.C112T p.L38L CGGGACCTGGCCC . 401.0 111.0 250.0 2.0 . 137 POLH 5429 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 43555153 43555153 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . POLH NM_006502 exon4 c.A417T p.A139A CTCGGCAGACTTG . 296.0 83.0 187.0 1.0 . 290 POLQ 10721 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 121208148 121208148 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . POLQ NM_199420 exon16 c.G3630A p.Q1210Q ATTTTTCTGTTTG . 121.0 53.0 109.0 0.0 . 664 POM121L2 94026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 27279131 27279131 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_033482 exon1 c.T819A p.S273R GGGAACACTTCTC . 152.0 30.0 101.0 0.0 . . POU3F4 5456 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 82764127 82764127 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . POU3F4 NM_000307 exon1 c.C795A p.S265R AGGGAGCCCGACC . 367.0 152.0 226.0 1.0 . 131 PPFIA2 8499 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 82147865 82147865 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PPFIA2 NM_001220476 exon2 c.C136G p.L46V TGTCTAGAAGACG . 120.0 49.0 138.0 0.0 . 231 PPFIBP1 8496 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 27832961 27832961 + Nonsense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PPFIBP1 NM_177444 exon20 c.T1880A p.L627X CCCGATTAGGTTG . 74.0 39.0 90.0 0.0 . 228 PPIG 9360 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 170465241 170465241 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PPIG NM_004792 exon7 c.A350G p.K117R GAGGGAAGGATAC . 356.0 154.0 378.0 0.0 . 92 PPP1R3F 89801 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 49143177 49143177 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PPP1R3F NM_033215 exon4 c.A2025G p.I675M CCAGATAGAGGTC . 115.0 99.0 134.0 0.0 . 229 PPP1R9A 55607 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 94540283 94540283 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PPP1R9A NM_017650 exon2 c.T858C p.S286S TAAAAGTACCTCT . 134.0 59.0 163.0 1.0 . 208 PRAMEF12 390999 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 12837669 12837669 + Missense_Mutation SNP G G A rs201008398 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRAMEF12 NM_001080830 exon3 c.G1379A p.G460D GCTGTGGCATCAG . 275.0 125.0 291.0 0.0 G|0.993;T|0.007 25 PRB2 653247 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 11546400 11546400 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRB2 NM_006248 exon3 c.A612T p.P204P TGGGGGTGGTCCT . 322.0 46.0 369.0 0.0 . 22 PREX2 80243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 68965436 68965436 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PREX2 NM_025170 exon9 c.C1048A p.H350N GAGAAGCATGAAT . 192.0 130.0 142.0 0.0 . 390 PRKDC 5591 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 48695065 48695065 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRKDC . . . . CGCAGGTCCTCGC . 59.0 15.0 39.0 0.0 . 1515 PRKRIR 5612 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 76063253 76063253 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRKRIR NM_004705 exon5 c.T941A p.I314K TCAGTTATCATAG . 387.0 135.0 401.0 1.0 . 93 PRL 5617 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 22287693 22287693 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRL NM_000948 exon5 c.C622A p.H208N TTTTATGTGAATC . 143.0 43.0 63.0 0.0 . 90 PRPF4B 8899 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 4057278 4057278 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRPF4B NM_003913 exon13 c.A2590G p.K864E ATAGGTAAAAGCT . 122.0 25.0 64.0 0.0 . 1308 PRPS1L1 221823 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 18066634 18066634 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRPS1L1 NM_175886 exon1 c.A772G p.I258V GAGAAATGGCTGG . 147.0 11.0 173.0 1.0 . 1 PRSS16 10279 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 27216671 27216671 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRSS16 NM_005865 exon3 c.A283T p.I95L GGACCCATATTCC . 295.0 57.0 220.0 2.0 . 94 PRTFDC1 56952 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 25145922 25145922 + Missense_Mutation SNP A A T rs148662493 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRTFDC1 NM_020200 exon6 c.T426A p.D142E GACAACATCCTTT . 164.0 12.0 136.0 0.0 A|1.000;T|0.000 91 PRTFDC1 56952 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 25226147 25226147 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRTFDC1 NM_020200 exon3 c.T305C p.M102T ACCTTCATTGAGA . 86.0 22.0 79.0 0.0 . 91 PRTG 283659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 55971629 55971629 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRTG NM_173814 exon7 c.G988T p.V330F ATTCAACAAATGA . 104.0 44.0 88.0 0.0 . 92 PRUNE2 158471 broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 79318669 79318669 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRUNE2 NM_015225 exon9 c.G7860A p.T2620T TGATCTCGTATCG . 111.0 45.0 141.0 2.0 . 157 PRUNE2 158471 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 79325463 79325463 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PRUNE2 NM_015225 exon8 c.G1727T p.S576I CTGGGACTGTCTT . 74.0 27.0 83.0 0.0 . 157 PSAP 5660 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 73591653 73591653 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PSAP NM_002778 exon3 c.A199G p.K67E CGTCTTTGCATAT . 116.0 19.0 85.0 0.0 . 91 PSMA4 5685 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 78837269 78837269 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PSMA4 NM_001102667 exon6 c.G346A p.D116N CTGTGTGATATCA . 99.0 39.0 129.0 0.0 . 90 PSMA7 5688 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 20 60718284 60718284 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PSMA7 NM_002792 exon1 c.G76C p.V26L TCTTGACGGCCTC . 18.0 14.0 9.0 0.0 . 90 PSMA7 5688 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 20 60718296 60718296 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PSMA7 NM_002792 exon1 c.G64T p.A22S CCTGCGCGTACTC . 16.0 12.0 11.0 0.0 . 90 PTCHD1 139411 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 23397834 23397834 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTCHD1 NM_173495 exon2 c.C478T p.L160L GAAGAGCTAAAGA . 242.0 204.0 358.0 0.0 . 135 PTER 9317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 16553155 16553155 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTER NM_001001484 exon6 c.T950C p.L317P ATATACTCACCAA . 156.0 31.0 123.0 0.0 . 92 PTH1R 5745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 46937344 46937344 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTH1R NM_001184744 exon4 c.G298T p.G100C CCCACTGGCAGCA . 100.0 90.0 132.0 1.0 . 522 PTK7 5754 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 43109672 43109672 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTK7 NM_001270398 exon12 c.T1796A p.F599Y CAGTTTTTATCAC . 88.0 27.0 49.0 0.0 . 1493 PTPLAD2 401494 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21008034 21008034 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTPLAD2 NM_001010915 exon6 c.T602C p.M201T AGCATCATGAGAT . 98.0 43.0 98.0 0.0 . 91 PTPN13 5783 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 87732253 87732253 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTPN13 NM_080685 exon47 c.C7369A p.Q2457K ATGGTTCAGACAG . 42.0 12.0 46.0 0.0 . 230 PTPRZ1 5803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 121653036 121653036 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PTPRZ1 NM_002851 exon12 c.T3936A p.F1312L TGTATTTGCTACA . 146.0 57.0 157.0 0.0 . 699 PUS1 80324 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 132423731 132423731 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PUS1 NM_025215 exon4 c.C455A p.A152D CCGCAGCCGGCCA . 88.0 42.0 100.0 0.0 . 577 PXDNL 137902 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 52320842 52320842 + Silent SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PXDNL NM_144651 exon17 c.C3342G p.P1114P GTAGGAGGGTGCC . 193.0 73.0 145.0 0.0 . 70 PXDNL 137902 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 52321428 52321428 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PXDNL NM_144651 exon17 c.T2756A p.L919H TTCAGGAGACCCC . 201.0 67.0 178.0 0.0 . 70 PYGM 5837 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 64527129 64527129 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . PYGM NM_001164716 exon1 c.A242G p.K81R AGCACCTTGGGGT . 26.0 20.0 51.0 0.0 . 92 QPCT 25797 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 37599570 37599570 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . QPCT NM_012413 exon6 c.T895A p.Y299N TACAGTTATGGAG . 99.0 41.0 119.0 0.0 . 90 RAB11FIP5 26056 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 73315575 73315575 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RAB11FIP5 NM_015470 exon3 c.A1171G p.S391G TACGACTGCCTCT . 39.0 15.0 39.0 0.0 . 90 RAB3IL1 5866 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 61675695 61675695 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RAB3IL1 NM_001271686 exon2 c.A236G p.H79R TCCCTGTGGCCTT . 19.0 14.0 47.0 0.0 . 228 RAI1 10743 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 17698925 17698925 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RAI1 NM_030665 exon3 c.A2663T p.Q888L GCATGCAGGACCC . 66.0 33.0 80.0 0.0 . 91 RAP1GAP 5909 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 21940198 21940198 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RAP1GAP NM_001145658 exon9 c.A589T p.T197S ACTTGGTCCTGAG . 36.0 18.0 54.0 0.0 . 245 RAPGEF1 2889 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 134526250 134526250 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RAPGEF1 NM_198679 exon2 c.A151G p.K51E TTCCCTTCTTTGA . 169.0 68.0 172.0 0.0 . 849 RARA 5914 broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 38512266 38512266 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RARA NM_000964 exon9 c.G1177A p.E393K GGGGCTGAGCGGG . 177.0 79.0 174.0 1.0 . 1083 RASA2 5922 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 141290358 141290358 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RASA2 NM_006506 exon11 c.T1131C p.F377F TCCTTTTGCCACT . 200.0 64.0 221.0 1.0 . 661 RASSF8 11228 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 26217535 26217535 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RASSF8 NM_007211 exon4 c.G208T p.A70S CAGTATGCTAGTG . 100.0 42.0 119.0 0.0 . 90 RBL1 5933 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 20 35632146 35632146 + Nonsense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RBL1 NM_183404 exon21 c.A2995T p.R999X CGCTTCTTGGTGT . 228.0 97.0 213.0 0.0 . 419 RBL2 5934 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 53515713 53515713 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RBL2 NM_005611 exon21 c.A3215C p.K1072T GAGAAAAGATTTT . 111.0 57.0 121.0 0.0 . 841 RBM12 10137 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 34242510 34242510 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RBM12 NM_001198840 exon2 c.G735A p.P245P CAAGGGCGGCATG . 72.0 26.0 81.0 2.0 . 93 RCVRN 5957 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 9804355 9804355 + Silent SNP C C T rs144667256 TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RCVRN NM_002903 exon2 c.G444A p.P148P CTTTTCCGGCGTG . 99.0 49.0 101.0 0.0 C|1.000;T|0.000 90 RDH8 50700 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10129508 10129508 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RDH8 NM_015725 exon3 c.G424T p.V142F CGTCTCGTCAAAG . 77.0 25.0 81.0 0.0 . 94 RFPL2 10739 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 22 32586882 32586882 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RFPL2 NM_001098527 exon5 c.G1014A p.E338E CAATGGCTCCTCA . 264.0 116.0 250.0 0.0 . 91 RGS20 8601 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 54764467 54764467 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RGS20 NM_170587 exon1 c.A8T p.Q3L TGCCCCAGCTTTC . 124.0 32.0 95.0 0.0 . 227 RIMS1 22999 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 72892030 72892030 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RIMS1 NM_014989 exon6 c.C856G p.L286V GGAGCCCTGAAGA . 279.0 128.0 295.0 0.0 . 144 RIPK3 11035 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 24806550 24806550 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RIPK3 NM_006871 exon8 c.T1017A p.S339S ATTACGAGAGTGC . 28.0 13.0 52.0 0.0 . 946 RNF214 257160 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 117109396 117109396 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RNF214 NM_207343 exon3 c.A187T p.R63X AATAACAGAAATG . 137.0 58.0 150.0 0.0 . 90 RNF216 54476 broad.mit.edu;bcgsc.ca 37 7 5756357 5756357 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RNF216 NM_207111 exon10 c.A1685C p.Q562P TGATACTGTTCTT . 89.0 6.0 127.0 0.0 . 274 RNF8 9025 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 37349083 37349083 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RNF8 NM_003958 exon7 c.G1394T p.S465I ATCTGAGCTCAGA . 194.0 40.0 127.0 1.0 . 227 ROBO1 6091 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 78684981 78684981 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ROBO1 NM_002941 exon23 c.G3315T p.Q1105H TTGTTTCTGCTGT . 326.0 95.0 275.0 0.0 . 67 ROBO1 6091 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 78711213 78711213 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ROBO1 NM_002941 exon15 c.T2018A p.L673Q TTTCCCAGCTCTC . 291.0 86.0 232.0 0.0 . 67 ROBO2 6092 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 77629214 77629214 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ROBO2 NM_002942 exon16 c.A2445T p.A815A GGTTGCAGCTAGT . 175.0 105.0 142.0 1.0 . 328 ROR1 4919 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 64515633 64515633 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ROR1 NM_001083592 exon3 c.T434C p.V145A CTGGAGTCTTGTT . 75.0 26.0 97.0 0.0 . 1536 ROR2 4920 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 94486208 94486208 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ROR2 NM_004560 exon9 c.C2568A p.V856V CTTGGGGACCATC . 39.0 16.0 73.0 0.0 . 1471 RP1 6101 broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 55533893 55533893 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RP1 NM_006269 exon2 c.C367T p.R123C CGTCGGCGCCCGC . 142.0 89.0 75.0 1.0 . 102 RP1L1 94137 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 10465648 10465648 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RP1L1 NM_178857 exon4 c.A5960T p.Q1987L GCCTCCTGGGTCT . 38.0 21.0 80.0 0.0 . 139 RPL27 6155 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 41150829 41150829 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RPL27 NM_000988 exon2 c.G62A p.R21H CCGGACGCAAAGC . 42.0 19.0 50.0 0.0 . 90 RTN4IP1 84816 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 107076839 107076839 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RTN4IP1 NM_032730 exon1 c.T58C p.W20R TTCTCCAGAAGCA . 76.0 36.0 78.0 0.0 . 90 RUFY2 55680 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 70141014 70141014 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RUFY2 NM_017987 exon11 c.A1187T p.N396I TCTATGTTAATTG . 116.0 37.0 81.0 0.0 . 91 RYR2 6262 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 237666678 237666678 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . RYR2 NM_001035 exon22 c.A2486T p.K829I TGCCAAAAGAAAA . 273.0 198.0 193.0 2.0 . 158 SAMD15 161394 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 77843998 77843998 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SAMD15 NM_001010860 exon1 c.T237A p.P79P GAAACCTGGCGGG . 127.0 53.0 129.0 0.0 . 90 SAMD9 54809 ucsc.edu;bcgsc.ca 37 7 92732405 92732405 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SAMD9 NM_001193307 exon2 c.G3006A p.L1002L TTTATTCAGGTGA . 140.0 54.0 136.0 2.0 . 140 SAR1A 56681 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 71917592 71917592 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SAR1A NM_020150 exon5 c.A276C p.A92A ATTAATTGCTGGG . 127.0 43.0 92.0 0.0 . 227 SAT2 112483 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 7530941 7530941 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SAT2 NM_133491 exon1 c.C13A p.R5R GGATCCGCACGGA . 89.0 31.0 101.0 0.0 . 90 SCN10A 6336 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 38766700 38766700 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SCN10A NM_006514 exon17 c.T3193G p.W1065G CTTTCCACGTCTC . 60.0 45.0 140.0 1.0 . 99 SCN11A 11280 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 38926834 38926834 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SCN11A NM_014139 exon17 c.T3009C p.F1003F CCATCCAAAGCCA . 118.0 102.0 144.0 1.0 . 99 SCN1A 6323 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 166897949 166897949 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SCN1A NM_001165963 exon13 c.C2207T p.P736L CAACAGGGTGGGC . 73.0 30.0 72.0 0.0 . 147 SCNN1D 6339 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 1222886 1222886 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SCNN1D NM_001130413 exon10 c.1311-2A>T . CATTCCAGACAGT . 71.0 24.0 114.0 0.0 . 90 SEC23B 10483 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 18491619 18491619 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SEC23B NM_032985 exon2 c.A140G p.E47G TGAAAGAACGTCC . 239.0 106.0 216.0 0.0 . 91 SEC24C 9632 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 75525661 75525661 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SEC24C NM_004922 exon11 c.A1470T p.V490V CACTGTAGATTAC . 108.0 34.0 123.0 0.0 . 92 SEMA4F 10505 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 74883712 74883712 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SEMA4F NM_001271662 exon2 c.C197A p.S66Y ATTACTCTGTTCT . 119.0 52.0 148.0 0.0 . 93 SEPSECS 51091 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 25160667 25160667 + Silent SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SEPSECS NM_016955 exon2 c.A177C p.A59A CATGATTGCAAGT . 265.0 154.0 199.0 0.0 . 90 SERPINE2 5270 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 224866418 224866418 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SERPINE2 NM_001136530 exon2 c.T236A p.L79Q GCCCCCAGCTGAA . 63.0 27.0 63.0 0.0 . 290 SERPINI2 5276 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 167183368 167183368 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SERPINI2 NM_001012303 exon5 c.A602T p.Q201L AATTTCTGTTTCC . 102.0 43.0 106.0 0.0 . 228 SETD3 84193 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 99865385 99865385 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SETD3 NM_032233 exon13 c.A1416G p.K472K AATCTCTTTCTCA . 142.0 57.0 148.0 0.0 . 514 SEZ6L 23544 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26702074 26702074 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SEZ6L NM_021115 exon6 c.T1478C p.L493P TGCACCTGCACTT . 90.0 32.0 75.0 1.0 . 95 SFTPA1 653509 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 81371581 81371581 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001093770 exon3 c.C45A p.A15A CAGAGCCATGTGG . 421.0 152.0 332.0 1.0 . . SHOC2 8036 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 112724768 112724768 + Frame_Shift_Del DEL A A - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SHOC2 NM_007373 exon2 c.652delA p.S218fs AAACTCAGCATGC . 133.0 42.0 102.0 0.0 . 524 SHROOM3 57619 broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 77675938 77675938 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SHROOM3 NM_020859 exon7 c.C4302T p.A1434A GTGGGCCCACGCA . 151.0 58.0 172.0 1.0 . 93 SIGLEC1 6614 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 3674934 3674934 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SIGLEC1 NM_023068 exon12 c.G3190A p.V1064I TATAGACACCCTC . 122.0 47.0 193.0 1.0 . 167 SIGLEC7 27036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51645871 51645871 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SIGLEC7 NM_016543 exon1 c.A245T p.N82I CAAACAACCCAGC . 95.0 9.0 139.0 0.0 . 153 SIRT5 23408 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 13588600 13588600 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SIRT5 NM_012241 exon4 c.G153A p.K51K AGCAAAGCACATA . 367.0 86.0 173.0 0.0 . 228 SLC16A9 220963 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 61443920 61443920 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC16A9 NM_194298 exon2 c.T130C p.F44L CACCAAAGGCATC . 243.0 12.0 213.0 0.0 . 93 SLC1A6 6511 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 15083653 15083653 + Nonsense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC1A6 NM_001272087 exon4 c.C70T p.Q24X GCCGCTGCAGCCA . 107.0 48.0 106.0 1.0 . 186 SLC22A24 283238 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62886696 62886696 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001136506 exon3 c.A618T p.A206A GAACCCTGCCAAG . 213.0 76.0 205.0 0.0 . . SLC22A4 6583 broad.mit.edu;bcgsc.ca 37 5 131647952 131647952 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC22A4 NM_003059 exon2 c.A492G p.S164S GCTGTCAGACAGG . 61.0 5.0 106.0 0.0 . 90 SLC23A2 9962 broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 4837746 4837746 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC23A2 NM_203327 exon17 c.A1825G p.I609V TTATAATGTTCAT . 79.0 40.0 124.0 2.0 . 92 SLC27A5 10998 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 59022230 59022230 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC27A5 NM_012254 exon2 c.C756T p.L252L ATGGCTGAGGTAG . 52.0 25.0 55.0 0.0 . 90 SLC30A1 7779 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 211751602 211751602 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC30A1 NM_021194 exon1 c.G353T p.G118V CCGACCCCAAGGA . 205.0 43.0 105.0 0.0 . 93 SLC37A3 84255 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 140048534 140048534 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC37A3 NM_207113 exon10 c.A916G p.N306D AGTAATTCACTAA . 90.0 44.0 120.0 0.0 . 93 SLC41A3 54946 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 3 125775394 125775416 + Frame_Shift_Del DEL ATGGCCAGGCAATGCACCACGAT ATGGCCAGGCAATGCACCACGAT - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 ATGGCCAGGCAATGCACCACGAT ATGGCCAGGCAATGCACCACGAT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC41A3 NM_001008487 wholegene ACCACCATGGCCA . 88.0 14.0 140.0 0.0 . 90 SLC44A4 80736 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 31839119 31839119 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC44A4 NM_025257 exon9 c.T673G p.F225V GGGCAAAATCTTC . 168.0 7.0 117.0 0.0 . 156 SLC4A1 6521 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 42328926 42328926 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC4A1 NM_000342 exon18 c.C2342T p.S781F ATGCGGGACAGGA . 135.0 47.0 153.0 0.0 . 92 SLC5A1 6523 broad.mit.edu;ucsc.edu;bcgsc.ca 37 22 32495287 32495287 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC5A1 NM_000343 exon12 c.C1398A p.P466P ACCACCCATTGCG . 74.0 30.0 129.0 1.0 . 91 SLC6A3 6531 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 1409895 1409895 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC6A3 NM_001044 exon10 c.C1339A p.L447I TGAAGAGCTCACG . 51.0 29.0 74.0 0.0 . 157 SLC6A4 6532 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 28534791 28534791 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC6A4 NM_001045 exon13 c.T1609A p.W537R TCCTCCAGAACCA . 117.0 43.0 205.0 0.0 . 94 SLC6A5 9152 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 20652295 20652295 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLC6A5 NM_004211 exon10 c.A1558C p.I520L TTCGTCATCTTCT . 134.0 52.0 151.0 0.0 . 156 SLC9C2 284525 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 173526479 173526479 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_178527 exon10 c.G1215T p.M405I TCCTACCATTTGT . 445.0 95.0 262.0 0.0 . . SLFN13 146857 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 33767910 33767910 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLFN13 NM_144682 exon6 c.T2398A p.F800I TTTCAAAGAAGCA . 114.0 52.0 92.0 0.0 . 91 SLIT2 9353 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 4 20255500 20255500 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLIT2 NM_004787 exon1 c.A62G p.N21S TCCTGAACAAGGT . 42.0 11.0 17.0 0.0 . 521 SLIT2 9353 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 4 20525440 20525440 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLIT2 NM_004787 exon13 c.C1188A p.H396Q TCTCCACAACTTG . 251.0 15.0 208.0 0.0 . 521 SLITRK6 84189 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 86368800 86368800 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SLITRK6 NM_032229 exon2 c.T1844G p.L615R ATAATCAGAAGTC . 173.0 69.0 194.0 0.0 . 137 SMG9 56006 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44241827 44241827 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SMG9 NM_019108 exon9 c.A917T p.Q306L GCAATCTGGAGTG . 70.0 26.0 94.0 0.0 . 91 SMOX 54498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 4155893 4155893 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SMOX NM_175839 exon2 c.T191C p.V64A GCCGTGTGCAGAG . 95.0 36.0 106.0 0.0 . 153 SOGA2 23255 broad.mit.edu;ucsc.edu;bcgsc.ca 37 18 8825710 8825710 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_015210 exon15 c.C4202A p.P1401H CCCTCCCCAAAGC . 235.0 95.0 305.0 2.0 . . SOHLH1 402381 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 138589403 138589403 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SOHLH1 NM_001012415 exon4 c.A416T p.Q139L TGAATCTGACTCG . 67.0 30.0 98.0 0.0 . 135 SORT1 6272 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109910100 109910100 + Missense_Mutation SNP T T C rs61797119 byfrequency TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SORT1 NM_002959 exon3 c.A370G p.I124V CTAGAATGACCTG . 58.0 24.0 65.0 0.0 T|0.995;C|0.005 91 SOX12 6666 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 306791 306791 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SOX12 NM_006943 exon1 c.G223A p.G75S CGCCTGGGCCGCC . 123.0 51.0 155.0 0.0 . 514 SPACA1 81833 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 88757710 88757710 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPACA1 NM_030960 exon1 c.G87A p.G29G GCGCGGGACCAAC . 119.0 51.0 114.0 0.0 . 90 SPATA22 84690 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 3349813 3349813 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPATA22 NM_032598 exon7 c.A755G p.Y252C CGCCAATACTTCA . 409.0 155.0 423.0 0.0 . 90 SPATA5L1 79029 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 15 45694903 45694903 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPATA5L1 NM_024063 exon1 c.G276C p.R92S CCGGAGGAGTCTC . 14.0 8.0 10.0 0.0 . 94 SPOCK3 50859 broad.mit.edu;bcgsc.ca 37 4 168155255 168155255 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPOCK3 NM_016950 exon2 c.G70T p.A24S CCGCCGCGGCAGC . 109.0 42.0 129.0 1.0 . 136 SPTA1 6708 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 158632708 158632708 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPTA1 NM_003126 exon17 c.G2248C p.A750P ATGCAGCCAGGTC . 209.0 10.0 148.0 0.0 . 142 SPTBN1 6711 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 54882216 54882216 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPTBN1 NM_003128 exon28 c.A5832G p.S1944S TGTATCATCTGTT . 113.0 45.0 123.0 1.0 . 140 SPTBN4 57731 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 41071395 41071395 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SPTBN4 NM_020971 exon28 c.G5982A p.R1994R GGCGCGGGTGCCT . 116.0 48.0 110.0 0.0 . 94 SRCAP 10847 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 30749727 30749727 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SRCAP NM_006662 exon34 c.G8366A p.G2789E GCCCGGGAAGCCC . 66.0 9.0 79.0 0.0 . 94 SRRM4 84530 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 119554788 119554788 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SRRM4 NM_194286 exon4 c.A412T p.S138C AAGAAAAGTTCCA . 60.0 25.0 70.0 0.0 . 2 STAB1 23166 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52554842 52554842 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . STAB1 NM_015136 exon55 c.G5729T p.R1910L GCTGGCGCTTCTA . 42.0 32.0 54.0 0.0 . 139 STEAP3 55240 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 120020691 120020691 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . STEAP3 NM_182915 exon6 c.G1274T p.W425L ACGGCTGGACCCG . 47.0 21.0 41.0 0.0 . 91 STK10 6793 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 171509351 171509351 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . STK10 NM_005990 exon12 c.G1968A p.Q656Q TTTGAGCTGCTCT . 67.0 27.0 100.0 0.0 . 1022 STK35 140901 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 2097911 2097911 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . STK35 NM_080836 exon3 c.A1492G p.M498V ACTTCCATGTCTG . 80.0 40.0 127.0 0.0 . 334 STMN2 11075 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 80553736 80553736 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . STMN2 NM_007029 exon3 c.C239T p.S80F ACCTGTCCCTGGA . 300.0 20.0 266.0 0.0 . 515 SUCLG1 8802 ucsc.edu;bcgsc.ca 37 2 84668526 84668526 + Missense_Mutation SNP C C A rs146102400 byfrequency;alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SUCLG1 NM_003849 exon4 c.G376T p.A126S CAGCAGCAGCAAA . 260.0 98.0 327.0 2.0 C|1.000;T|0.000 90 SUFU 51684 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 104268957 104268957 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SUFU NM_001178133 exon2 c.A214T p.S72C TATGTTAGCATGT . 130.0 89.0 150.0 0.0 . 2246 SUPT20HL1 100130302 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 X 24383280 24383280 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001136234 exon1 c.G2403T p.Q801H ACCGCAGTGGCAG . 77.0 66.0 121.0 1.0 . . SVEP1 79987 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 113341549 113341549 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SVEP1 NM_153366 exon1 c.C275T p.S92F ACGCTGGACGAAT . 51.0 21.0 60.0 0.0 . 75 SVEP1 79987 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 113168473 113168473 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SVEP1 NM_153366 exon38 c.A9407T p.E3136V TGTGCCTCTCCAG . 153.0 62.0 145.0 0.0 . 75 SYK 6850 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 93650165 93650165 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SYK NM_003177 exon12 c.A1716G p.P572P GAAGCCATATCGA . 97.0 40.0 111.0 0.0 . 1402 SYNE1 23345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 152765648 152765648 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SYNE1 NM_033071 exon30 c.C3756A p.L1252L TTCTTCGAGAGAA . 60.0 33.0 101.0 0.0 . 607 SYNE2 23224 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 64519465 64519465 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SYNE2 NM_182914 exon48 c.G8834A p.C2945Y AGTTTTGCAGACA . 139.0 50.0 133.0 1.0 . 164 SYT2 127833 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 202571584 202571584 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SYT2 NM_177402 exon5 c.T555A p.P185P CTTGTCAGGAAGG . 132.0 99.0 77.0 0.0 . 93 SYT3 84258 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51128790 51128790 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . SYT3 NM_032298 exon6 c.G1434T p.E478D CCGCCCCTCGCTG . 84.0 27.0 114.0 0.0 . 155 TAF1L 138474 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 32632432 32632432 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TAF1L NM_153809 exon1 c.G3146C p.R1049P ATTGTGCGCACCA . 217.0 81.0 215.0 0.0 . 870 TANC1 85461 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 160087091 160087091 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TANC1 NM_033394 exon27 c.C5154A p.P1718P CAGACCCCGCAAC . 111.0 43.0 135.0 0.0 . 92 TCEB3CL2 100506888 bcgsc.ca;mdanderson.org 37 18 44543310 44543310 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001242907 exon1 c.C1062G p.D354E TTCCACGTCGCCG . 293.0 18.0 351.0 0.0 . . TCF4 6925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 53303052 53303052 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TCF4 NM_001243226 exon1 c.A77T p.Y26F TTTGAGTAATTTG . 116.0 40.0 120.0 0.0 . 523 TCHH 7062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152081242 152081242 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TCHH NM_007113 exon3 c.A4451G p.D1484G TTTCTGTCACGCT . 246.0 49.0 147.0 0.0 . 72 TCN1 6947 broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 59623413 59623413 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TCN1 NM_001062 exon6 c.A866T p.Q289L AAGACCTGGGCTG . 264.0 66.0 205.0 1.0 . 92 TDRD9 122402 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 104460669 104460669 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TDRD9 NM_153046 exon10 c.G1181T p.G394V CCCTAGGTCTGGG . 77.0 29.0 63.0 0.0 . 70 TEK 7010 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 27203079 27203079 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TEK NM_000459 exon13 c.C2171A p.A724D ACCCAGCCTTTTC . 134.0 56.0 185.0 0.0 . 1584 TENM3 55714 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 183659668 183659668 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001080477 exon17 c.A3350G p.D1117G CATTAGATAAACA . 86.0 41.0 88.0 0.0 . . TEX11 56159 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 69772028 69772028 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TEX11 NM_001003811 exon29 c.T2513A p.L838Q TCTTCCAGGGGAC . 467.0 215.0 326.0 1.0 . 178 THOP1 7064 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 2810300 2810300 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . THOP1 NM_003249 exon10 c.1456-2A>T . CCCTGCAGGCGGA . 45.0 19.0 61.0 0.0 . 92 THRSP 7069 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 77775013 77775013 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . THRSP NM_003251 exon1 c.A86G p.Q29R TGGAGCAGGTGGT . 70.0 32.0 63.0 0.0 . 69 TIGD5 84948 broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 144681732 144681732 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TIGD5 NM_032862 exon1 c.G1659A p.L553L AGCCCTGCCCCCT . 75.0 27.0 46.0 2.0 . 90 TLR3 7098 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 186997908 186997908 + Silent SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TLR3 NM_003265 exon2 c.A135C p.V45V TCAGGTACCCGAT . 105.0 41.0 135.0 0.0 . 524 TLX1NB 100038246 broad.mit.edu;mdanderson.org 37 10 102849344 102849344 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001085398 exon3 c.C319A p.R107R TTCTCCGTAGGCG . 99.0 59.0 78.0 2.0 . . TM9SF4 9777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 30738606 30738606 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TM9SF4 NM_014742 exon12 c.G1173T p.V391V CAGGGTGTTTGGC . 110.0 50.0 133.0 0.0 . 514 TMC1 117531 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 75404071 75404071 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMC1 NM_138691 exon15 c.A1062T p.V354V CCAAGTAGAAGAA . 139.0 8.0 130.0 0.0 . 91 TMEM132B 114795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 126138603 126138603 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMEM132B NM_052907 exon9 c.A2584G p.K862E TTACTCAAAAGTG . 91.0 44.0 132.0 0.0 . 185 TMEM151B 441151 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 44243711 44243711 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_001137560 exon3 c.T1148A p.L383Q AGCAGCTGGTGCC . 59.0 18.0 36.0 0.0 . . TMEM179 388021 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 105070865 105070865 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMEM179 NM_207379 exon1 c.C214T p.R72C TGAAGCGGCAGGC . 43.0 19.0 63.0 0.0 . 514 TMEM79 84283 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 156255759 156255759 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMEM79 NM_032323 exon2 c.T742A p.F248I GCCACCTTCCCCA . 143.0 95.0 83.0 1.0 . 90 TMF1 7110 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 69097054 69097054 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMF1 NM_007114 exon2 c.A802G p.I268V CACTTATTACACT . 68.0 30.0 58.0 0.0 . 90 TMPRSS11A 339967 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 68780363 68780363 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMPRSS11A NM_182606 exon9 c.T1047C p.D349D TTTTATATCATTG . 235.0 30.0 251.0 0.0 . 69 TMPRSS11A 339967 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 68795630 68795630 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TMPRSS11A NM_182606 exon5 c.T458C p.L153S ATTGGCAAGGCTC . 165.0 79.0 213.0 0.0 . 69 TNPO1 3842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 72188978 72188978 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TNPO1 NM_002270 exon16 c.G1801T p.V601F TCTTCAGTTGCCA . 104.0 45.0 80.0 0.0 . 228 TNPO1 3842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 72201205 72201205 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TNPO1 NM_002270 exon24 c.A2665G p.K889E CCCTTAAAAGAGC . 75.0 26.0 77.0 0.0 . 228 TNRC6B 23112 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 40708962 40708962 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TNRC6B NM_001162501 exon19 c.G4639T p.A1547S TACAGTGCCTCTG . 106.0 39.0 110.0 0.0 . 22 TNS1 7145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 218750502 218750502 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TNS1 NM_022648 exon13 c.A706G p.I236V GCTCGATGGTGAT . 74.0 29.0 72.0 0.0 . 156 TNS3 64759 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 47342734 47342734 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TNS3 NM_022748 exon22 c.A3271T p.T1091S GCAGGGTCACACC . 100.0 11.0 112.0 0.0 . 94 TPBG 7162 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 83074944 83074944 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TPBG NM_001166392 exon2 c.T266A p.L89Q CGGACCTGCCCGC . 24.0 8.0 39.0 0.0 . 514 TPH2 121278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 72425319 72425319 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TPH2 NM_173353 exon11 c.T1317C p.I439I GTCAATTACCCGT . 141.0 60.0 156.0 0.0 . 93 TPRA1 131601 broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 127298924 127298924 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TPRA1 NM_001142646 exon2 c.A66G p.P22P GATGTTTGGTGCC . 39.0 4.0 52.0 0.0 . 90 TRHR 7201 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 110100121 110100121 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TRHR NM_003301 exon1 c.T380G p.I127S TAGCAATCTGTCA . 416.0 77.0 237.0 0.0 . 620 TRIM28 10155 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 59057222 59057222 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TRIM28 NM_005762 exon3 c.A545G p.Q182R CGCACCAGCGGGT . 123.0 48.0 124.0 1.0 . 870 TRPA1 8989 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 72938310 72938310 + Splice_Site SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TRPA1 NM_007332 exon26 c.2938-2A>T . TCCACCTAAAGTG . 111.0 58.0 69.0 1.0 . 230 TRPC6 7225 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 101375282 101375282 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TRPC6 NM_004621 exon2 c.G418T p.A140S CCACTGCCAACTG . 97.0 40.0 120.0 0.0 . 93 TSNAX 7257 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 231700443 231700443 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TSNAX NM_005999 exon6 c.G665T p.R222L TTTTACGTCAGGT . 359.0 240.0 237.0 0.0 . 90 TTC25 83538 broad.mit.edu;ucsc.edu;mdanderson.org 37 17 40117322 40117322 + RNA SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TTC25 . . . . TATAGGAGGCCTT . 135.0 50.0 135.0 0.0 . 23 TTK 7272 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 80746315 80746315 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TTK NM_003318 exon17 c.A2048G p.Q683R ATTCTCAGGTAAG . 104.0 39.0 87.0 0.0 . 1299 TTN 7273 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179544108 179544108 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TTN NM_001267550 exon142 c.C33700A p.P11234T GCACAGGAACTTT . 136.0 48.0 168.0 1.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179431803 179431803 + Silent SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TTN NM_001267550 exon326 c.A79056G p.L26352L ACCTTCTAAGAGT . 119.0 43.0 120.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179587117 179587117 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TTN NM_001267550 exon77 c.A22397C p.Q7466P GAAGTCTGTAGAT . 98.0 38.0 109.0 0.0 . 636 TUBB2B 347733 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 3227741 3227741 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TUBB2B NM_178012 exon1 c.G37T p.G13C GGTTGCCGCACTG . 37.0 11.0 21.0 0.0 . 153 TYR 7299 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 88911129 88911129 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . TYR NM_000372 exon1 c.T8A p.L3Q TGCTCCTGGCTGT . 57.0 28.0 103.0 0.0 . 92 U2AF2 11338 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 56173908 56173908 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . U2AF2 NM_001012478 exon6 c.G527T p.G176V GCCTGGGGGGGCT . 131.0 52.0 156.0 1.0 . 91 UBL4B 164153 broad.mit.edu;ucsc.edu;mdanderson.org 37 1 110655547 110655547 + Nonsense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . UBL4B NM_203412 exon1 c.G391T p.E131X CACCTGGAGCAGC . 98.0 37.0 117.0 1.0 . 69 UBR4 23352 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 19433356 19433356 + Silent SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . UBR4 NM_020765 exon82 c.C12210T p.A4070A CTTCCAGGCATCA . 184.0 83.0 255.0 0.0 . 612 ULK1 8408 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 132393332 132393332 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ULK1 NM_003565 exon6 c.G460T p.A154S CGCCGCGCCAACC . 37.0 19.0 44.0 0.0 . 758 UMODL1 89766 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 43496123 43496123 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . UMODL1 NM_173568 exon2 c.T86A p.L29H AAGGCCTCTCCCT . 92.0 34.0 131.0 0.0 . 93 UNC79 57578 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 94046694 94046694 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_020818 exon19 c.T2102A p.L701Q AGAGACTAGCTCC . 104.0 53.0 102.0 0.0 . . UNC80 285175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 210805966 210805966 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . UNC80 NM_032504 exon43 c.T6470C p.L2157P TTGGCCTCGACAC . 112.0 52.0 135.0 0.0 . 90 USP7 7874 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 8988707 8988707 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . USP7 NM_003470 exon29 c.G3045T p.E1015D AAAATGCTCGCCC . 88.0 33.0 104.0 0.0 . 661 UTP15 84135 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 72868323 72868323 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . UTP15 NM_032175 exon7 c.A683G p.Y228C GTCGTTATGTTAA . 143.0 56.0 173.0 0.0 . 90 VBP1 7411 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 154444801 154444801 + Silent SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . VBP1 NM_003372 exon1 c.C42G p.A14A AATGGCCACAGGG . 130.0 72.0 69.0 0.0 . 226 VEPH1 79674 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 157031464 157031464 + Silent SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . VEPH1 NM_001167912 exon11 c.G1956T p.G652G AGCACCCCCTGCC . 91.0 33.0 103.0 0.0 . 155 VRTN 55237 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 74825421 74825421 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . VRTN NM_018228 exon2 c.G1935T p.M645I GGACATGATCGCT . 126.0 48.0 125.0 0.0 . 155 VWA3B 200403 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 98797635 98797635 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . VWA3B NM_144992 exon9 c.T1271C p.I424T TGGATATAAAAGC . 125.0 48.0 196.0 0.0 . 139 VWA7 80737 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 31735467 31735467 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_025258 exon11 c.G1568T p.G523V AGCAGCCCATCCA . 190.0 42.0 108.0 0.0 . . WDFY4 57705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 10 49982657 49982657 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDFY4 NM_020945 exon14 c.C2708A p.S903X TCCACTCACGCCT . 137.0 43.0 87.0 0.0 . 22 WDR43 23160 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 29169340 29169340 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDR43 NM_015131 exon17 c.A1829T p.D610V CTGATGATGAAAT . 126.0 44.0 120.0 0.0 . 69 WDR47 22911 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109525342 109525342 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDR47 NM_001142550 exon12 c.G2179A p.G727S CTGGGCCTTCCAT . 138.0 61.0 133.0 0.0 . 91 WDR66 144406 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 122413230 122413230 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDR66 NM_144668 exon18 c.A2852G p.K951R AAGGAAAATTCTA . 156.0 55.0 200.0 0.0 . 92 WDR70 55100 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 37721261 37721261 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDR70 NM_018034 exon14 c.G1461A p.M487I GATCATGGTTGGA . 153.0 63.0 176.0 0.0 . 187 WDR87 83889 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 38377306 38377306 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_031951 exon6 c.G6888A p.K2296K CTCCTCCTTCTTC . 210.0 93.0 224.0 1.0 . . WDR93 56964 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 15 90272996 90272996 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WDR93 NM_020212 exon11 c.A1206G p.K402K GGATAAAGCTGGT . 93.0 5.0 135.0 0.0 . 24 WFDC3 140686 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 44405762 44405762 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WFDC3 NM_080614 exon5 c.T445A p.C149S TGCAGCATTTATG . 151.0 62.0 190.0 0.0 . 90 WFDC3 140686 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 44418554 44418554 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WFDC3 NM_080614 exon2 c.T61A p.W21R TTATCCAGGATTC . 66.0 20.0 115.0 0.0 . 90 WNT4 54361 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 22446623 22446623 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . WNT4 NM_030761 exon5 c.T976C p.C326R AGCTGCAGCGTTC . 33.0 15.0 57.0 0.0 . 524 XPO6 23214 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 16 28137133 28137141 + In_Frame_Del DEL CGGCAGTCG CGGCAGTCG - novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 CGGCAGTCG CGGCAGTCG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . XPO6 NM_015171 exon13 c.1635_1643del p.545_548del AGCCGCCGGCAGT . 51.0 17.0 71.0 0.0 . 227 XRN1 54464 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 142145680 142145680 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . XRN1 NM_001042604 exon3 c.A312T p.S104S CTTTGCTGACCTT . 68.0 40.0 94.0 0.0 . 93 YIF1B 90522 broad.mit.edu;bcgsc.ca 37 19 38798334 38798334 + Missense_Mutation SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . YIF1B NM_001039672 exon6 c.G598A p.E200K GCACCTCCAGGGT . 63.0 27.0 97.0 2.0 . 68 ZBED2 79413 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 111312691 111312691 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZBED2 NM_024508 exon2 c.C358A p.Q120K GGCGCTGCCCAGC . 67.0 30.0 70.0 0.0 . 91 ZBTB37 84614 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 173842760 173842760 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZBTB37 NM_032522 exon4 c.A1079T p.Y360F CTGTGTATGAATA . 234.0 38.0 130.0 0.0 . 90 ZBTB39 9880 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 57397645 57397645 + Missense_Mutation SNP C C G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZBTB39 NM_014830 exon2 c.G1057C p.E353Q TGGGCTCTAGAAC . 117.0 48.0 128.0 0.0 . 135 ZCCHC6 79670 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 88961390 88961390 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZCCHC6 NM_024617 exon3 c.A526G p.K176E GCTTCTTGTTTTC . 90.0 28.0 118.0 0.0 . 92 ZDHHC13 54503 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 19170823 19170823 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZDHHC13 NM_019028 exon5 c.T464A p.L155Q TCCACCTGGCAGT . 124.0 55.0 133.0 1.0 . 90 ZDHHC13 54503 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 19170802 19170802 + Missense_Mutation SNP A A C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZDHHC13 NM_019028 exon5 c.A443C p.E148A ATGGAGAGGGATT . 134.0 51.0 135.0 0.0 . 90 ZFP36L1 677 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 69256435 69256435 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZFP36L1 NM_001244701 exon3 c.C1039A p.L347I GGAAGAGGAAGGT . 63.0 34.0 96.0 0.0 . 91 ZFPM2 23414 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 106813578 106813578 + Missense_Mutation SNP G G A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 ZFPM2,NS,carcinoma,-1 ZFPM2 NM_012082 exon8 c.G1268A p.S423N CCCAGAGCCAAAA . 299.0 134.0 149.0 0.0 . 139 ZFYVE9 9372 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 52761649 52761649 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZFYVE9 NM_004799 exon12 c.A3333G p.A1111A TCTTGCAGTAAGT . 102.0 43.0 115.0 0.0 . 230 ZGPAT 84619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 62366141 62366141 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZGPAT NM_032527 exon5 c.G1016T p.R339I GCTCCAGACTCCT . 94.0 35.0 88.0 0.0 . 90 ZIM3 114026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 57646378 57646378 + Nonsense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZIM3 NM_052882 exon5 c.G1327T p.G443X TTTGTCCAGTATG . 127.0 50.0 143.0 0.0 . 92 ZMYND15 84225 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 4649179 4649179 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZMYND15 NM_001267822 exon14 c.C2147A p.A716E GCCCGGCGCCCGG . 245.0 129.0 315.0 0.0 . 90 ZNF143 7702 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 9499989 9499989 + Silent SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF143 NM_003442 exon6 c.A426T p.T142T TACCACAGCTTAT . 75.0 22.0 98.0 0.0 . 90 ZNF256 10172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58452722 58452722 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF256 NM_005773 exon3 c.A1454G p.H485R CCAGTATGAACTT . 56.0 21.0 60.0 0.0 . 92 ZNF285 26974 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44892183 44892183 + Missense_Mutation SNP T T G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF285 NM_152354 exon4 c.A224C p.Q75P CAAATCTGCCAGC . 175.0 67.0 197.0 0.0 . 94 ZNF287 57336 broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 16470686 16470686 + Silent SNP T T C rs201476319 alternate_allele TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF287 NM_020653 exon2 c.A360G p.A120A AGTCACTGCTTCC . 85.0 35.0 98.0 1.0 T|0.999;G|0.001 90 ZNF28 7576 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 53303548 53303548 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF28 NM_006969 exon4 c.A1550G p.H517R CCAGTATGAACTC . 65.0 21.0 104.0 0.0 . 91 ZNF311 282890 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 28962885 28962885 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF311 NM_001010877 exon7 c.A1894G p.R632G GTTTTCTTTTCTT . 208.0 38.0 130.0 0.0 . 22 ZNF330 27309 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 142145639 142145639 + Splice_Site SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF330 NM_014487 exon3 c.121-2A>T . TGTTACAGGAATG . 354.0 156.0 349.0 0.0 . 90 ZNF334 55713 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 45130946 45130946 + Silent SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF334 NM_018102 exon5 c.A1032T p.T344T CTCCCCTGTGTGT . 97.0 40.0 107.0 0.0 . 92 ZNF451 26036 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 57011970 57011970 + Missense_Mutation SNP T T A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF451 NM_001031623 exon10 c.T1087A p.Y363N AGAGGTTATTGTC . 345.0 65.0 169.0 1.0 . 93 ZNF451 26036 ucsc.edu;bcgsc.ca 37 6 57011971 57011971 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF451 NM_001031623 exon10 c.A1088T p.Y363F GAGGTTATTGTCC . 345.0 64.0 170.0 2.0 . 93 ZNF473 25888 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 50549039 50549039 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF473 NM_015428 exon5 c.A1339G p.N447D CACCTTAATGAAC . 104.0 45.0 106.0 1.0 . 91 ZNF483 158399 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 9 114289679 114289679 + Missense_Mutation SNP C C A novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF483 NM_133464 exon2 c.C4A p.Q2K ACAATGCAAGCTG . 117.0 9.0 104.0 0.0 . 91 ZNF496 84838 broad.mit.edu;ucsc.edu 37 1 247492170 247492170 + Splice_Site SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF496 NM_032752 exon5 c.391-2A>G . TTGAGCTGCAATC . 68.0 13.0 75.0 2.0 . 91 ZNF521 25925 broad.mit.edu;ucsc.edu;bcgsc.ca 37 18 22805628 22805628 + Missense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF521 NM_015461 exon4 c.T2254A p.Y752N ACCTATAGACTTT . 82.0 36.0 78.0 1.0 . 275 ZNF676 163223 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 22375842 22375842 + Missense_Mutation SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF676 NM_001001411 exon2 c.C106A p.H36N TCTCATGTCTCTT . 63.0 14.0 107.0 1.0 . 90 ZNF678 339500 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 227834348 227834348 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF678 NM_178549 exon3 c.A227G p.N76S TCGAGAACTACAG . 100.0 69.0 60.0 1.0 . 91 ZNF683 257101 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 26694278 26694278 + Missense_Mutation SNP G G C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . NM_173574 exon3 c.C125G p.A42G CTGCAGGCTGAGA . 75.0 36.0 107.0 0.0 . . ZNF687 57592 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 151262629 151262630 + Frame_Shift_Ins INS - - G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF687 NM_020832 exon7 c.2996_2997insG p.E999fs TGTGTGAGCGCTC . 164.0 30.0 114.0 0.0 . 92 ZNF707 286075 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 8 144776308 144776308 + Missense_Mutation SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF707 NM_001100598 exon6 c.A724G p.S242G GCGTTCAGCCTGA . 89.0 10.0 49.0 0.0 . 67 ZNF708 7562 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 21477081 21477081 + Nonsense_Mutation SNP A A T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF708 NM_021269 exon4 c.T687A p.C229X TTTTCCACATTCT . 32.0 15.0 27.0 0.0 . 516 ZNF76 7629 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 35260758 35260758 + Silent SNP G G T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF76 NM_003427 exon11 c.G1266T p.A422A GGTGGCGATGGTG . 239.0 58.0 160.0 0.0 . 90 ZNF786 136051 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 148767562 148767562 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNF786 NM_152411 exon4 c.A2302G p.K768E GCCTTTTCTTAAT . 138.0 58.0 111.0 0.0 . 50 ZNRF4 148066 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 5455751 5455751 + Silent SNP C C T novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZNRF4 NM_181710 exon1 c.C249T p.V83V GGCAGTCAAAGCC . 25.0 11.0 31.0 0.0 . 135 ZSCAN23 222696 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 28402633 28402633 + Missense_Mutation SNP T T C novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZSCAN23 NM_001012455 exon4 c.A779G p.Q260R GAATTCTGGGTGA . 275.0 66.0 148.0 0.0 . 68 ZZEF1 23140 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 3937451 3937451 + Silent SNP A A G novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . ZZEF1 NM_015113 exon40 c.T6442C p.L2148L CTGGCAAAAGACG . 202.0 78.0 199.0 0.0 . 93 ZNF479 90827 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 7 57188114 57188115 + Missense_Mutation DNP CC CC AA novel TCGA-CC-A7IH-01A-11D-A33K-10 TCGA-CC-A7IH-10A-01D-A33K-10 CC CC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6d3ad3bc-b5be-4233-a04b-909afa0302cf aa24c0b3-7197-431d-b840-98fb061c54f6 . . . . . p.W336F TGAGGACCAGCTA . 188.0 67.0 202.0 0.0 . .