Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48467402 48467402 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ABCA13 NM_152701 exon42 c.C12499T p.H4167Y AAATCTCACATTG . 106.0 52.0 151.0 0.0 . 521 ACLY 47 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 40024989 40024989 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ACLY NM_001096 exon28 c.G3184A p.V1062M CCAGCACAAAGAT . 48.0 19.0 76.0 0.0 . 228 ACTC1 70 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 35085586 35085586 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ACTC1 NM_005159 exon3 c.C314T p.T105I AGCAGGGTGGGGT . 88.0 62.0 155.0 0.0 . 92 ACTN2 88 ucsc.edu;bcgsc.ca 37 1 236906333 236906333 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ACTN2 NM_001103 exon11 c.T1245C p.T415T CGAGACTTGGGCT . 40.0 4.0 59.0 0.0 . 95 ALKBH3 221120 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 43923153 43923153 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ALKBH3 NM_139178 exon8 c.A547T p.N183Y TATCGCAATGAGA . 65.0 26.0 104.0 0.0 . 90 ALKBH4 54784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 102100057 102100057 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ALKBH4 NM_017621 exon2 c.G315T p.R105S CTGCTTCCTCCGT . 29.0 12.0 56.0 0.0 . 90 AMPD1 270 ucsc.edu;bcgsc.ca 37 1 115218550 115218550 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . AMPD1 NM_000036 exon11 c.A1562G p.E521G GTGGCCTCAAACA . 28.0 4.0 42.0 0.0 . 293 ANKRD12 23253 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 9255525 9255525 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ANKRD12 NM_015208 exon9 c.A2260T p.I754F GACAAGATTAAAA . 24.0 11.0 64.0 0.0 . 92 ANKRD34A 284615 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 145474731 145474731 + Nonsense_Mutation SNP T T A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ANKRD34A NM_001039888 exon4 c.T1403A p.L468X GCAAATTGGTGAG . 43.0 16.0 27.0 0.0 . 68 ANKRD52 283373 ucsc.edu;bcgsc.ca 37 12 56648360 56648360 + Splice_Site SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ANKRD52 NM_173595 exon8 c.693+2T>C . GCCCTGACCTCCG . 45.0 5.0 61.0 0.0 . 70 ARHGAP31 57514 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 119087231 119087231 + Silent SNP C C G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ARHGAP31 NM_020754 exon3 c.C216G p.G72G GTTTGGCTCAGAT . 86.0 57.0 86.0 0.0 . 92 ARMC3 219681 ucsc.edu;bcgsc.ca 37 10 23326201 23326201 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ARMC3 NM_173081 exon19 c.T2412C p.A804A GCAGGCTCTGGCT . 51.0 5.0 108.0 0.0 . 90 ASNS 440 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 97481701 97481701 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ASNS NM_133436 exon13 c.G1556A p.R519H ACTTGACGGTAGT . 125.0 50.0 135.0 0.0 . 91 ASPHD1 253982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 29912566 29912566 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ASPHD1 NM_181718 exon1 c.C274T p.L92F CTGTTCCTCTGGT . 110.0 22.0 92.0 0.0 . 68 ATG2B 55102 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 96795907 96795907 + Missense_Mutation SNP T T G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ATG2B NM_018036 exon12 c.A1795C p.S599R CAGTACTAAAATA . 85.0 50.0 166.0 0.0 . 93 ATP6V0A2 23545 ucsc.edu;bcgsc.ca 37 12 124220107 124220107 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ATP6V0A2 NM_012463 exon8 c.A761G p.N254S ATCCAAACACAGC . 57.0 5.0 61.0 0.0 . 92 BIRC6 57448 ucsc.edu;bcgsc.ca 37 2 32773060 32773060 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . BIRC6 NM_016252 exon64 c.A12954G p.E4318E AGAGGAACATGTT . 45.0 4.0 77.0 0.0 . 233 C12orf40 283461 ucsc.edu;bcgsc.ca 37 12 40040182 40040182 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . C12orf40 NM_001031748 exon4 c.C254T p.P85L AAATGCCCCTAAG . 42.0 4.0 93.0 0.0 . 96 C16orf54 283897 ucsc.edu;bcgsc.ca 37 16 29755768 29755768 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_175900 exon2 c.T505C p.W169R CAGCCCAGCTCAC . 42.0 4.0 35.0 0.0 . . C1QBP 708 ucsc.edu;bcgsc.ca 37 17 5336663 5336663 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . C1QBP NM_001212 exon5 c.T649C p.S217P ATTCAGACTCGCC . 37.0 4.0 83.0 0.0 . 91 C5 727 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 123792742 123792742 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . C5 NM_001735 exon7 c.A691G p.I231V GCTCGATTGAGAC . 186.0 88.0 389.0 0.0 . 92 C9orf24 84688 ucsc.edu;bcgsc.ca 37 9 34385758 34385758 + Silent SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . C9orf24 NM_032596 exon2 c.C157A p.R53R CATGTCGCTCCAT . 36.0 4.0 113.0 0.0 . 91 CALCA 796 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 14990439 14990439 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CALCA NM_001741 exon4 c.T332A p.I111N ACCCCAATTGCAG . 130.0 64.0 190.0 0.0 . 514 CASP7 840 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 115457351 115457351 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CASP7 NM_001267057 exon2 c.G323A p.R108H TGTACCGTCCCTC . 75.0 17.0 126.0 0.0 . 660 CD27 939 ucsc.edu;bcgsc.ca 37 12 6559457 6559457 + Silent SNP C C T rs199876113 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CD27 NM_001242 exon3 c.C387T p.T129T GCTGACCGCTCGG . 37.0 4.0 47.0 0.0 C|0.999;T|0.000 659 CDKL5 6792 ucsc.edu;bcgsc.ca 37 X 18664147 18664147 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CDKL5 NM_003159 exon19 c.A2734G p.R912G GGCAGAAGACAGA . 34.0 4.0 63.0 0.0 . 838 CISH 1154 hgsc.bcm.edu;bcgsc.ca 37 3 50645109 50645109 + Frame_Shift_Del DEL C C - novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CISH NM_013324 exon4 c.757delG p.A253fs CGTCGGCCACCAG . 76.0 46.0 140.0 0.0 . 710 CLN5 1203 ucsc.edu;bcgsc.ca 37 13 77569324 77569324 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CLN5 NM_006493 exon2 c.A447G p.P149P AGCCCCAGTATGG . 56.0 6.0 107.0 1.0 . 91 CMBL 134147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 10288612 10288612 + Missense_Mutation SNP T T A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CMBL NM_138809 exon3 c.A245T p.Q82L GGCTCTTGCCCTA . 60.0 16.0 57.0 0.0 . 69 CNGA1 1259 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 47939598 47939598 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CNGA1 NM_001142564 exon10 c.A1120G p.M374V TATACATAACAAG . 92.0 43.0 140.0 0.0 . 92 COL11A1 1301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 103461593 103461593 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . COL11A1 NM_080629 exon27 c.C2283T p.P761P ACCAGGGGGACCC . 20.0 16.0 88.0 0.0 . 586 CRIP3 401262 ucsc.edu;bcgsc.ca 37 6 43274203 43274203 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CRIP3 NM_206922 exon5 c.T381C p.C127C CTCCCCACAGCCA . 42.0 4.0 65.0 0.0 . 91 CROCC 9696 ucsc.edu;bcgsc.ca 37 1 17274950 17274950 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CROCC NM_014675 exon18 c.G2639A p.G880D ACGCTGGCCTGGC . 26.0 4.0 41.0 0.0 . 137 CSGALNACT2 55454 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 43650967 43650967 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CSGALNACT2 NM_018590 exon2 c.C370T p.L124F GAGTTTCTTCATT . 66.0 33.0 97.0 0.0 . 69 CSMD2 114784 ucsc.edu;bcgsc.ca 37 1 34037319 34037319 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CSMD2 NM_052896 exon52 c.T7776C p.T2592T AGGACAAGTCACA . 42.0 4.0 60.0 0.0 . 103 CTNND1 1500 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 57569523 57569523 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CTNND1 NM_001085461 exon7 c.C1275T p.H425H AGTGCACCTTGGA . 77.0 36.0 128.0 0.0 . 272 CUEDC1 404093 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 55945598 55945598 + Missense_Mutation SNP C C G rs34800498 byfrequency;alternate_allele TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . CUEDC1 NM_001271875 exon8 c.G947C p.R316P TTCCTCCGGGTGG . 76.0 43.0 102.0 0.0 C|0.958;T|0.042 228 DCUN1D4 23142 broad.mit.edu;ucsc.edu 37 4 52779748 52779748 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DCUN1D4 NM_001040402 exon11 c.T877C p.X293Q ATGTCCTAGGACT . 34.0 5.0 48.0 0.0 . 92 DDX17 10521 ucsc.edu;bcgsc.ca 37 22 38897272 38897272 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DDX17 NM_006386 exon2 c.G301A p.G101S CACCACCTCTTGC . 29.0 4.0 43.0 0.0 . 229 DNAH6 1768 broad.mit.edu;bcgsc.ca 37 2 84881832 84881832 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DNAH6 NM_001370 exon35 c.A5683G p.M1895V TGTGGAATGGTGT . 114.0 6.0 216.0 0.0 . 69 DNAJA1 3301 ucsc.edu;bcgsc.ca 37 9 33037026 33037026 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DNAJA1 NM_001539 exon8 c.G888A p.K296K TGTCAAGCATGGA . 38.0 4.0 72.0 0.0 . 226 DOK7 285489 ucsc.edu;bcgsc.ca 37 4 3494936 3494936 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DOK7 NM_173660 exon7 c.C1223A p.P408Q ACACACCACGCAG . 33.0 4.0 63.0 0.0 . 91 DPF3 8110 ucsc.edu;bcgsc.ca 37 14 73181159 73181159 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DPF3 NM_012074 exon6 c.A576G p.E192E GTGGTCTTCCTGA . 34.0 4.0 54.0 0.0 . 1 DTNB 1838 ucsc.edu;bcgsc.ca 37 2 25799831 25799831 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DTNB NM_021907 exon8 c.T752C p.M251T CCCATCATACTCT . 44.0 4.0 89.0 0.0 . 137 DUS1L 64118 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 80017940 80017940 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . DUS1L NM_022156 exon11 c.G1052T p.G351V CGCGCACCTGCCT . 138.0 25.0 122.0 1.0 . 91 EFEMP1 2202 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 56094351 56094351 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . EFEMP1 NM_001039349 exon11 c.G1339T p.A447S GCATTGCACTTAC . 36.0 18.0 83.0 1.0 . 520 EMR1 2015 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 6919616 6919616 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . EMR1 NM_001256253 exon13 c.G1478A p.R493H ATGAGCGCTTCTT . 133.0 60.0 188.0 0.0 . 526 ERO1L 30001 ucsc.edu;bcgsc.ca 37 14 53149118 53149118 + Silent SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ERO1L NM_014584 exon3 c.G243T p.L81L CCTCTTCAGGTTT . 48.0 4.0 119.0 0.0 . 90 EXOC3L2 90332 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 45730995 45730995 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . EXOC3L2 NM_138568 exon5 c.C329A p.P110Q ACTGCTGGGTTCT . 82.0 24.0 85.0 2.0 . 91 FAM102A 399665 ucsc.edu;bcgsc.ca 37 9 130705487 130705487 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FAM102A NM_001035254 exon11 c.T1139C p.V380A TCAATCACAACTG . 44.0 4.0 66.0 0.0 . 91 FAM184B 27146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 17710586 17710586 + Missense_Mutation SNP C C A rs61746992 byfrequency;alternate_allele TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FAM184B NM_015688 exon2 c.G823T p.D275Y CCAGGTCTCCTTC . 110.0 45.0 147.0 0.0 C|0.972;G|0.028 23 FAM20B 9917 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 179013021 179013021 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FAM20B NM_014864 exon2 c.C39T p.L13L AATTCTCCTTGTC . 209.0 75.0 127.0 0.0 . 93 FGFBP1 9982 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 15938165 15938165 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FGFBP1 NM_005130 exon3 c.C91A p.L31I TGTGAAGTCCATT . 300.0 107.0 318.0 2.0 . 90 FLAD1 80308 ucsc.edu;bcgsc.ca 37 1 154956204 154956204 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FLAD1 NM_025207 exon1 c.A34G p.R12G TTCCAGAGGCAGG . 41.0 4.0 54.0 0.0 . 93 FLG 2312 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 152280175 152280175 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . FLG NM_002016 exon3 c.A7187G p.H2396R TCTTGGTGGCTCT . 404.0 106.0 393.0 1.0 . 106 FOCAD 54914 ucsc.edu;bcgsc.ca 37 9 20717832 20717832 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_017794 exon5 c.G97T p.G33C GAAAATGGTTTTT . 38.0 4.0 78.0 0.0 . . GAB1 2549 ucsc.edu;bcgsc.ca 37 4 144381615 144381615 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GAB1 NM_207123 exon9 c.A1868G p.N623S CCATGAACCCAAA . 45.0 5.0 57.0 0.0 . 1146 GAL3ST3 89792 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 65810617 65810617 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GAL3ST3 NM_033036 exon3 c.C657T p.D219D GGCGTCGTCGCGC . 40.0 20.0 49.0 0.0 . 91 GBP2 2634 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 89573964 89573964 + Missense_Mutation SNP C C T rs200077424 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GBP2 NM_004120 exon11 c.G1670A p.R557H AGAAGGCGTTCCT . 52.0 20.0 74.0 0.0 C|0.999;T|0.001 91 GFRA2 2675 ucsc.edu;bcgsc.ca 37 8 21560353 21560353 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001495 exon7 c.G1182A p.L394L GGTCCCCAAGCTG . 63.0 7.0 146.0 1.0 . . GNGT2 2793 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 47284179 47284179 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GNGT2 NM_031498 exon4 c.C150T p.L50L GCCTTTGAGAAAA . 160.0 64.0 247.0 0.0 . 227 GPR114 221188 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 57596061 57596061 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GPR114 NM_153837 exon2 c.C56T p.A19V AGAATGCAACAAC . 47.0 23.0 68.0 0.0 . 90 GREB1L 80000 ucsc.edu;bcgsc.ca 37 18 19020239 19020239 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001142966 exon9 c.T959C p.F320S CCATGTTCATTTC . 33.0 4.0 51.0 0.0 . . GRM5 2915 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 88583097 88583097 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GRM5 NM_000842 exon3 c.G888A p.A296A TTCTCCCGCTAGA . 146.0 78.0 193.0 0.0 . 949 GSTCD 79807 ucsc.edu;bcgsc.ca 37 4 106647833 106647833 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GSTCD NM_001031720 exon4 c.C992T p.A331V AAACAGCAGCTTC . 38.0 4.0 115.0 0.0 . 92 GUF1 60558 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 44697656 44697656 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . GUF1 NM_021927 exon15 c.A1740T p.K580N TGGCAAAGCCATA . 63.0 35.0 69.0 0.0 . 91 HAUS5 23354 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 36106172 36106172 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . HAUS5 NM_015302 exon6 c.G369A p.Q123Q CACCCAGCGTCGA . 42.0 22.0 61.0 0.0 . 68 HKDC1 80201 ucsc.edu;bcgsc.ca 37 10 71002998 71002998 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . HKDC1 NM_025130 exon7 c.A752G p.D251G AGGGCGACGAGGG . 38.0 4.0 80.0 0.0 . 95 HNF1A 6927 ucsc.edu;bcgsc.ca 37 12 121434085 121434085 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . HNF1A NM_000545 exon5 c.G976T p.A326S CAGCCTGCGACCA . 28.0 4.0 55.0 0.0 . 1745 ICAM5 7087 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10404831 10404831 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ICAM5 NM_003259 exon8 c.G1827A p.V609V GTGCGTGGGCTCC . 44.0 22.0 56.0 0.0 . 153 IFT80 57560 broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 159976324 159976324 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . IFT80 NM_020800 exon20 c.T2323C p.L775L GCTTTAAACCTAT . 189.0 121.0 292.0 2.0 . 522 IL12RB1 3594 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 18188364 18188364 + Nonsense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . IL12RB1 NM_153701 exon5 c.C511T p.Q171X GGAACTGCACCTC . 58.0 22.0 71.0 0.0 . 91 IL36RN 26525 ucsc.edu;bcgsc.ca 37 2 113820248 113820248 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . IL36RN NM_012275 exon5 c.T462C p.C154C GCAGTGTGACTAG . 28.0 4.0 33.0 0.0 . 91 INSR 3643 ucsc.edu;bcgsc.ca 37 19 7126664 7126664 + Splice_Site SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . INSR NM_001079817 exon16 c.2910-2A>G . GCTGCCTGGAGGA . 32.0 4.0 29.0 0.0 . 1381 INTS10 55174 ucsc.edu;bcgsc.ca 37 8 19682425 19682425 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . INTS10 NM_018142 exon8 c.G948A p.L316L CATGCTGGTCTTC . 43.0 4.0 105.0 0.0 . 91 ITPR2 3709 ucsc.edu;bcgsc.ca 37 12 26647251 26647251 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ITPR2 NM_002223 exon39 c.A5205G p.S1735S CTTATCTGAATCT . 41.0 4.0 56.0 0.0 . 542 KAT2A 2648 ucsc.edu;bcgsc.ca 37 17 40270418 40270418 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KAT2A NM_021078 exon7 c.C1077T p.F359F GGACAGGAATCTG . 49.0 4.0 48.0 0.0 . 523 KIAA0317 9870 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 75140804 75140804 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIAA0317 NM_001039479 exon9 c.T1091A p.V364E TCCTTCACTGAGA . 50.0 14.0 105.0 0.0 . 525 KIAA1244 57221 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 138612924 138612924 + Silent SNP G G A rs140287471 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIAA1244 NM_020340 exon19 c.G3102A p.S1034S TGCCTCGCAGCCC . 85.0 32.0 135.0 1.0 G|1.000;A|0.000 228 KIAA2026 158358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 5920263 5920263 + Silent SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIAA2026 NM_001017969 exon8 c.C5733A p.L1911L TATAAGGAGAACA . 53.0 31.0 72.0 0.0 . 92 KIF13B 23303 ucsc.edu;bcgsc.ca 37 8 28980997 28980997 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIF13B NM_015254 exon28 c.A3365G p.D1122G GCATCATCCTCTG . 16.0 4.0 81.0 0.0 . 22 KIF21B 23046 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 200960199 200960199 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIF21B NM_017596 exon18 c.G2533T p.D845Y CAGAGTCCAGCAT . 171.0 47.0 121.0 0.0 . 96 KIF22 3835 broad.mit.edu;ucsc.edu;mdanderson.org 37 16 29816332 29816332 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KIF22 NM_007317 exon12 c.C1875A p.H625Q GCTCCACGGCCCC . 16.0 6.0 15.0 0.0 . 68 KRTAP5-1 387264 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 1606219 1606219 + Silent SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . KRTAP5-1 NM_001005922 exon1 c.G261T p.G87G ACAGCCCCCCTTG . 159.0 54.0 168.0 1.0 . 44 LIN28B 389421 ucsc.edu;bcgsc.ca 37 6 105526351 105526351 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LIN28B NM_001004317 exon4 c.A446G p.K149R AGCCAAAGAAGTG . 27.0 4.0 61.0 0.0 . 90 LINC00521 256369 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 94467500 94467500 + RNA SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . . . . . GCACGGGATGGGA . 41.0 32.0 89.0 0.0 . . LRP1 4035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 57556190 57556190 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LRP1 NM_002332 exon14 c.G2293T p.V765F GGCAGTGTCTACC . 72.0 30.0 105.0 0.0 . 596 LRRC4C 57689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 40137651 40137651 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LRRC4C NM_001258419 exon7 c.G192A p.R64R GTTTTTCCGAACA . 92.0 39.0 97.0 0.0 . 521 LRRK2 120892 ucsc.edu;bcgsc.ca 37 12 40619068 40619068 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LRRK2 NM_198578 exon1 c.C135A p.F45L GGTGTTCACGTAC . 25.0 4.0 59.0 0.0 . 533 LRRN3 54674 ucsc.edu;bcgsc.ca 37 7 110763773 110763773 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LRRN3 NM_018334 exon2 c.A945G p.E315E AATAGAAGCTACT . 40.0 4.0 56.0 0.0 . 154 LTA 4049 ucsc.edu;bcgsc.ca 37 6 31540523 31540523 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . LTA NM_001159740 exon2 c.A4G p.T2A CCCATGACACCAC . 48.0 4.0 40.0 0.0 . 522 MAB21L1 4081 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 36049572 36049572 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MAB21L1 NM_005584 exon1 c.C704T p.A235V GCCTCCGCGAACT . 21.0 18.0 52.0 0.0 . 92 MAP7 9053 ucsc.edu;bcgsc.ca 37 6 136682317 136682317 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MAP7 NM_001198609 exon12 c.A1617G p.R539R CTTTTGTCTGGAA . 13.0 4.0 20.0 0.0 . 90 MCTP1 79772 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 94275895 94275895 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MCTP1 NM_024717 exon5 c.A1066G p.T356A CATCTGTGGGCCT . 16.0 6.0 53.0 0.0 . 92 MKL1 57591 ucsc.edu;bcgsc.ca 37 22 40807623 40807623 + Missense_Mutation SNP T T C rs28661556 alternate_allele TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MKL1 NM_020831 exon15 c.A2567G p.H856R GGGGGGTGGTCCA . 41.0 4.0 43.0 0.0 . 948 MRPL22 29093 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 154346429 154346429 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MRPL22 NM_014180 exon7 c.G593A p.R198H AGCTTCGCAGCCG . 63.0 33.0 49.0 0.0 . 90 MSH5 4439 broad.mit.edu;ucsc.edu 37 6 31729292 31729292 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MSH5 NM_025259 exon22 c.T2135C p.L712P ACTGGCTGGCACG . 26.0 4.0 62.0 1.0 . 661 MYO5A 4644 broad.mit.edu;bcgsc.ca 37 15 52656807 52656807 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MYO5A NM_000259 exon24 c.T3253C p.F1085L GACTGAACTCATT . 130.0 6.0 199.0 0.0 . 93 MYO9B 4650 ucsc.edu;bcgsc.ca 37 19 17212654 17212654 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . MYO9B NM_001130065 exon2 c.A127G p.T43A GACAGCACCACCT . 48.0 4.0 59.0 1.0 . 67 NHS 4810 ucsc.edu;bcgsc.ca 37 X 17744747 17744747 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NHS NM_198270 exon6 c.T2458C p.S820P AGCATCTCTTTCA . 43.0 4.0 41.0 0.0 . 197 NOTCH4 4855 ucsc.edu;bcgsc.ca 37 6 32169089 32169089 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NOTCH4 NM_004557 exon22 c.T3944C p.L1315P CGGGCCAGGGCAA . 43.0 4.0 85.0 0.0 . 1321 NOTCH4 4855 ucsc.edu;bcgsc.ca 37 6 32183154 32183154 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NOTCH4 NM_004557 exon12 c.T1870C p.C624R CCTCACAGAGCTG . 45.0 4.0 92.0 0.0 . 1321 NUDT21 11051 ucsc.edu;bcgsc.ca 37 16 56481870 56481870 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NUDT21 NM_007006 exon2 c.A148G p.K50E GCTCTTTTGTACC . 43.0 4.0 107.0 0.0 . 90 NUP153 9972 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 17640200 17640200 + Missense_Mutation SNP C C G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NUP153 NM_005124 exon15 c.G1816C p.G606R CACTTCCTTCTTT . 78.0 24.0 92.0 0.0 . 637 NYNRIN 57523 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 24884257 24884257 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . NYNRIN NM_025081 exon9 c.T3302C p.M1101T GCTTCATGGACTC . 76.0 27.0 89.0 0.0 . 3 OR11L1 391189 broad.mit.edu;bcgsc.ca 37 1 248004537 248004537 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . OR11L1 NM_001001959 exon1 c.T662C p.I221T GACACAATGAAAA . 115.0 6.0 150.0 0.0 . 71 OR13J1 392309 ucsc.edu;bcgsc.ca 37 9 35869605 35869605 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . OR13J1 NM_001004487 exon1 c.A794G p.K265R GCTTCCTTACTCT . 35.0 4.0 52.0 0.0 . 68 OR2J3 442186 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29080221 29080221 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . OR2J3 NM_001005216 exon1 c.C554A p.P185Q AAGTTCCAGCACT . 301.0 85.0 328.0 0.0 . 90 OR4D2 124538 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 56247344 56247344 + Missense_Mutation SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . OR4D2 NM_001004707 exon1 c.G328T p.A110S GGAGGTGCCATGG . 56.0 15.0 103.0 0.0 . 114 OTUD3 23252 ucsc.edu;bcgsc.ca 37 1 20234091 20234091 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_015207 exon8 c.A1049G p.Q350R AACAGCAGTGGAT . 22.0 5.0 55.0 1.0 . . OTX1 5013 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 63282697 63282698 + Frame_Shift_Del DEL AG AG - novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 AG AG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . OTX1 NM_014562 exon5 c.311_312del p.104_104del GAACCAAGAGCCG . 92.0 22.0 173.0 0.0 . 70 PAK2 5062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 196547330 196547330 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PAK2 NM_002577 exon13 c.G1242A p.V414V AGAGGTGGTTACA . 146.0 40.0 135.0 0.0 . 957 PALD1 27143 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 72324191 72324191 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_014431 exon19 c.T2334C p.Y778Y GCGCTATGTCTGC . 79.0 19.0 168.0 0.0 . . PDCD11 22984 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 105162878 105162878 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PDCD11 NM_014976 exon4 c.C238T p.L80L TAGTCCCTGTGTG . 216.0 59.0 348.0 0.0 . 275 PDZD2 23037 ucsc.edu;bcgsc.ca 37 5 32090075 32090075 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PDZD2 NM_178140 exon19 c.T6521C p.L2174P CCTCCCTTCAAAC . 42.0 4.0 100.0 0.0 . 563 PHC2 1912 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 33799862 33799862 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PHC2 NM_198040 exon9 c.C1587T p.T529T GAGGTCGGTCAGT . 108.0 48.0 98.0 0.0 . 227 PKD1 5310 broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 2149979 2149979 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PKD1 NM_000296 exon29 c.G9806T p.R3269L GGCGGCCGGTCCC . 167.0 70.0 198.0 2.0 . 91 PKD1L3 342372 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 71963537 71963537 + RNA SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PKD1L3 . . . . TAACAAATTTGAG . 139.0 63.0 189.0 0.0 . 68 PKM 5315 ucsc.edu;bcgsc.ca 37 15 72499166 72499166 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001206796 exon9 c.T1265C p.V422A TTGGCCACATCAC . 51.0 4.0 85.0 0.0 . . PLA2G2E 30814 ucsc.edu;bcgsc.ca 37 1 20248851 20248851 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PLA2G2E NM_014589 exon3 c.G226A p.G76S CACAGCCCAGCTT . 42.0 4.0 113.0 0.0 . 90 PLEKHM3 389072 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 208865840 208865840 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PLEKHM3 NM_001080475 exon2 c.A524G p.Q175R AATGGCTGCTGCT . 156.0 84.0 168.0 0.0 . 23 POLG 5428 ucsc.edu;bcgsc.ca 37 15 89873328 89873328 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . POLG NM_002693 exon3 c.A839G p.E280G TACTGCTCCCTGA . 48.0 4.0 63.0 1.0 . 228 PPIP5K1 9677 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 43827486 43827486 + Missense_Mutation SNP C C G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PPIP5K1 NM_001130858 exon31 c.G3688C p.E1230Q CTTGCTCCCCTTC . 215.0 84.0 262.0 0.0 . 90 PPP1R12A 4659 broad.mit.edu;bcgsc.ca 37 12 80175618 80175618 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PPP1R12A NM_002480 exon23 c.T2932C p.S978P ACAGTGATCTATC . 112.0 5.0 152.0 0.0 . 273 PPP1R1A 5502 ucsc.edu;bcgsc.ca 37 12 54975806 54975806 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PPP1R1A NM_006741 exon5 c.A357G p.P119P TGTGTCTGGGATC . 50.0 5.0 64.0 0.0 . 226 PPP2R1A 5518 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 52716334 52716334 + Missense_Mutation SNP C C G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 PPP2R1A,NS,carcinoma,0 PPP2R1A NM_014225 exon6 c.C778G p.R260G CGCGTCCGCTACA . 27.0 13.0 25.0 0.0 . 1666 PPP2R5D 5528 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 42975774 42975774 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PPP2R5D NM_006245 exon7 c.C828T p.I276I TTATATCCGTAGG . 126.0 70.0 109.0 0.0 . 1082 PRAMEF2 65122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 12920107 12920107 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PRAMEF2 NM_023014 exon3 c.C847T p.H283Y AGTGGGCACCTGG . 58.0 20.0 91.0 0.0 . 68 PREX2 80243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 69021775 69021775 + Missense_Mutation SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PREX2 NM_024870 exon25 c.A3063T p.E1021D CTTAGAAACCCAA . 102.0 29.0 93.0 0.0 . 390 PRKDC 5591 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 48839897 48839897 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PRKDC . . . . CTCAGGCCCAGTT . 128.0 31.0 111.0 0.0 . 1515 PSD2 84249 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 139189232 139189232 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PSD2 NM_032289 exon2 c.T207C p.H69H CTTCCATGGCCTC . 168.0 88.0 231.0 0.0 . 91 PSMD5 5711 ucsc.edu;bcgsc.ca 37 9 123595662 123595662 + Silent SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PSMD5 NM_005047 exon2 c.G246T p.R82R GAGGTTCCGGGCC . 40.0 4.0 62.0 0.0 . 90 PTEN 5728 ucsc.edu;bcgsc.ca 37 10 89711906 89711906 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 PTEN,NS,carcinoma,+1 PTEN NM_000314 exon6 c.T524C p.V175A GCTATGTGTATTA . 46.0 4.0 71.0 0.0 . 17735 PTPN14 5784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 214557484 214557484 + Missense_Mutation SNP G G A rs200947677 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PTPN14 NM_005401 exon13 c.C1714T p.R572W GTGGCCGTGGGTA . 54.0 18.0 55.0 0.0 G|0.999;A|0.001 290 PTPRT 11122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 40714481 40714481 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . PTPRT NM_133170 exon29 c.T3916C p.Y1306H GCCAGTACTGCAT . 102.0 30.0 82.0 0.0 . 664 RAB34 83871 ucsc.edu;bcgsc.ca 37 17 27042076 27042076 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RAB34 NM_001144943 exon9 c.A749G p.E250G CAGTACTCAGCCT . 39.0 4.0 63.0 0.0 . 227 RBBP5 5929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 205084043 205084043 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RBBP5 NM_005057 exon3 c.C92T p.T31I TTAAAGGTGCAAG . 369.0 120.0 192.0 0.0 . 226 RBM6 10180 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 50095360 50095360 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RBM6 NM_005777 exon9 c.G1893A p.R631R TCGAAGGGAAGGG . 52.0 35.0 49.0 0.0 . 280 RET 5979 ucsc.edu;bcgsc.ca 37 10 43613903 43613903 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RET NM_020975 exon13 c.A2367G p.K789K CATCAAATTGTAT . 52.0 5.0 86.0 0.0 . 4507 RGS22 26166 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 101118126 101118126 + Silent SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RGS22 NM_015668 exon1 c.G24T p.A8A CCTACCCGCGGTG . 60.0 34.0 40.0 0.0 . 140 RHBDF1 64285 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 111695 111695 + Splice_Site SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RHBDF1 NM_022450 exon10 c.1209-1G>A . AAGGGCCTGCGGG . 45.0 21.0 45.0 0.0 . 92 RING1 6015 broad.mit.edu;bcgsc.ca 37 6 33178961 33178961 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RING1 NM_002931 exon5 c.C482T p.P161L CGATACCAGGGTC . 23.0 3.0 35.0 0.0 . 159 RNF216 54476 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 5662625 5662625 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RNF216 NM_207111 exon17 c.A2638G p.M880V GCCCCATGTTGAG . 63.0 17.0 115.0 0.0 . 274 RRP1B 23076 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 45089836 45089836 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . RRP1B NM_015056 exon2 c.C202A p.P68T GATGAACCCCTTC . 192.0 103.0 310.0 0.0 . 91 SASH1 23328 ucsc.edu;bcgsc.ca 37 6 148869462 148869462 + Missense_Mutation SNP G G T rs143577116 byfrequency;alternate_allele TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SASH1 NM_015278 exon20 c.G3512T p.R1171L TCTGCCGAAAGCC . 43.0 4.0 57.0 0.0 G|0.999;A|0.001 90 SATB1 6304 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 18436227 18436227 + Silent SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SATB1 NM_002971 exon7 c.T933A p.P311P ACTGATAGGTGTT . 103.0 60.0 156.0 0.0 . 228 SETDB2 83852 ucsc.edu;bcgsc.ca 37 13 50054356 50054356 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SETDB2 NM_031915 exon8 c.A907G p.T303A TTTAGAACAAAAT . 43.0 4.0 118.0 0.0 . 91 SFXN3 81855 ucsc.edu;bcgsc.ca 37 10 102794566 102794566 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SFXN3 NM_030971 exon3 c.T127C p.S43P CTGCTGTCCGGGG . 55.0 5.0 90.0 0.0 . 91 SH3GL2 6456 ucsc.edu;bcgsc.ca 37 9 17786386 17786386 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SH3GL2 NM_003026 exon4 c.A195G p.R65R TTCCAGAGCTAAG . 42.0 4.0 77.0 0.0 . 91 SIGIRR 59307 ucsc.edu;bcgsc.ca 37 11 408175 408175 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SIGIRR NM_021805 exon4 c.T238C p.S80P CACTGGACACAAG . 44.0 4.0 43.0 0.0 . 90 SLC19A2 10560 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 169446920 169446920 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SLC19A2 NM_006996 exon2 c.T280C p.Y94H GGAGGTAGTCTGT . 180.0 57.0 141.0 2.0 . 90 SLC35A2 7355 ucsc.edu;bcgsc.ca 37 X 48763797 48763797 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SLC35A2 NM_001042498 exon3 c.T298C p.F100L GGAGGAAGAGAAC . 46.0 4.0 52.0 0.0 . 193 SLC44A2 57153 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10753056 10753056 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SLC44A2 NM_020428 exon21 c.G1943A p.G648D TCGTTGGCTCCTA . 205.0 82.0 310.0 0.0 . 91 SLC8A2 6543 ucsc.edu;bcgsc.ca 37 19 47935595 47935595 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SLC8A2 NM_015063 exon9 c.G2218A p.V740M GGGGCACACAGGC . 32.0 4.0 40.0 0.0 . 94 SMCR7L 54471 ucsc.edu;bcgsc.ca 37 22 39910017 39910017 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SMCR7L NM_019008 exon6 c.T1081C p.S361P TGCCGATCTCTGT . 21.0 4.0 39.0 0.0 . 90 SMNDC1 10285 ucsc.edu;bcgsc.ca 37 10 112063292 112063292 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SMNDC1 NM_005871 exon2 c.A54G p.Q18Q TTCAACTTGCTGG . 35.0 4.0 70.0 0.0 . 91 SORCS2 57537 ucsc.edu;bcgsc.ca 37 4 7716009 7716009 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SORCS2 NM_020777 exon16 c.A2032G p.R678G CGGAAAAGAAAGT . 45.0 4.0 48.0 0.0 . 91 SORL1 6653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 121383718 121383718 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SORL1 NM_003105 exon7 c.T946C p.L316L CATCTCTTGGGCA . 90.0 32.0 97.0 0.0 . 228 SPEN 23013 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 16257658 16257658 + Missense_Mutation SNP T T G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SPEN NM_015001 exon11 c.T4923G p.S1641R TCCAAGTGTCACA . 64.0 20.0 68.0 0.0 . 298 SPTB 6710 ucsc.edu;bcgsc.ca 37 14 65239594 65239594 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SPTB NM_001024858 exon25 c.T5257C p.F1753L CGATGAAGGCATT . 41.0 4.0 67.0 0.0 . 100 ST3GAL5 8869 broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 86075030 86075030 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ST3GAL5 NM_003896 exon4 c.G616A p.G206R CTAATCCGTGCAG . 36.0 5.0 49.0 0.0 . 90 SUCLG1 8802 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 84660559 84660559 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . SUCLG1 NM_003849 exon6 c.G590A p.G197D ACAATGCCTTAAC . 81.0 34.0 172.0 0.0 . 90 SYNE3 161176 ucsc.edu;bcgsc.ca 37 14 95906121 95906121 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_152592 exon12 c.A2074G p.R692G CCAGCCTCTAAAG . 21.0 4.0 44.0 0.0 . . TACR3 6870 ucsc.edu;bcgsc.ca 37 4 104640338 104640338 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TACR3 NM_001059 exon1 c.T495C p.P165P TGTGATAGGAAAG . 26.0 4.0 75.0 0.0 . 525 TAL1 6886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 47685719 47685719 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TAL1 NM_003189 exon4 c.C669T p.L223L CTTGCTGAGCTTC . 178.0 71.0 224.0 0.0 . 1082 TANC1 85461 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 160053178 160053178 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TANC1 NM_033394 exon18 c.C3039T p.H1013H GGGCCACGGTGAC . 100.0 34.0 106.0 0.0 . 92 TASP1 55617 ucsc.edu;bcgsc.ca 37 20 13610722 13610722 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TASP1 NM_017714 exon2 c.A4G p.T2A CCATGGTCATTCT . 32.0 6.0 68.0 0.0 . 90 TBC1D9 23158 ucsc.edu;bcgsc.ca 37 4 141622704 141622704 + Silent SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TBC1D9 NM_015130 exon2 c.C195A p.I65I GTACAAGATTCGG . 26.0 4.0 89.0 0.0 . 23 TCHP 84260 ucsc.edu;bcgsc.ca 37 12 110341849 110341849 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TCHP NM_001143852 exon3 c.C296T p.A99V TGCTGGCCAGAGA . 28.0 4.0 59.0 0.0 . 91 TENC1 23371 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 12 53457144 53457144 + Missense_Mutation SNP G G A rs201129709 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TENC1 NM_015319 exon27 c.G4034A p.R1345H TCTTTCGCCGCCA . 128.0 56.0 114.0 0.0 G|0.999;A|0.000 92 TENC1 23371 ucsc.edu;bcgsc.ca 37 12 53453408 53453408 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TENC1 NM_015319 exon18 c.A2013G p.P671P GAAACCAGCCACT . 36.0 4.0 58.0 0.0 . 92 TENM2 57451 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 167674101 167674101 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001122679 exon27 c.A6130G p.N2044D ATGGTCAACCTCC . 36.0 15.0 60.0 1.0 . . TENM3 55714 ucsc.edu;bcgsc.ca 37 4 183713755 183713755 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001080477 exon25 c.T5930C p.L1977P GAGTCCTAAAGAC . 39.0 4.0 49.0 0.0 . . TENM3 55714 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 183675952 183675952 + Missense_Mutation SNP G G C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001080477 exon21 c.G4432C p.A1478P TCCCTGGCTGCTT . 43.0 21.0 91.0 0.0 . . TM2D2 83877 ucsc.edu;bcgsc.ca 37 8 38851161 38851161 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TM2D2 NM_078473 exon3 c.A334G p.S112G CGTCGCTGTAGGC . 27.0 4.0 56.0 0.0 . 90 TMEM225 338661 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 123753908 123753908 + Silent SNP A A T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 TMEM225,mouth,carcinoma,-1 TMEM225 NM_001013743 exon4 c.T615A p.R205R GTGTGCACGGACA . 206.0 94.0 201.0 0.0 . 93 TMEM254 80195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 81850592 81850592 + Missense_Mutation SNP G G C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001270367 exon4 c.G363C p.W121C ACTCTGGTTCCTA . 89.0 31.0 186.0 0.0 . . TNKS 8658 ucsc.edu;bcgsc.ca 37 8 9622231 9622231 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TNKS NM_003747 exon23 c.A3378G p.Q1126Q GATGCAAAGTACT . 44.0 4.0 86.0 0.0 . 660 TNPO2 30000 ucsc.edu;bcgsc.ca 37 19 12817572 12817572 + Silent SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TNPO2 NM_013433 exon13 c.G1308T p.L436L CGGGATCAGCTCA . 42.0 4.0 70.0 0.0 . 227 TRAPPC9 83696 ucsc.edu;bcgsc.ca 37 8 141034128 141034128 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TRAPPC9 NM_031466 exon18 c.A2899G p.T967A CTTCAGTGTGGCC . 46.0 4.0 78.0 0.0 . 228 TRDN 10345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 123825006 123825006 + Missense_Mutation SNP C C A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TRDN NM_001256020 exon8 c.G651T p.K217N TTTAGTCTTTTCT . 248.0 209.0 510.0 0.0 . 91 TRIO 7204 ucsc.edu;bcgsc.ca 37 5 14502722 14502722 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TRIO NM_007118 exon54 c.A8367G p.K2789K CTGGAAAGACAAC . 38.0 4.0 58.0 0.0 . 562 TTC3 7267 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 38572587 38572587 + Missense_Mutation SNP G G A rs200071342 TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TTC3 NM_001001894 exon45 c.G5905A p.V1969M AAAAACGTGCGTG . 138.0 57.0 210.0 0.0 G|0.999;A|0.001 590 TTI1 9675 ucsc.edu;bcgsc.ca 37 20 36641352 36641352 + Silent SNP G G T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TTI1 NM_014657 exon3 c.C867A p.I289I AATAAGGATAGTC . 40.0 4.0 42.0 0.0 . 94 TTPAL 79183 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 43108685 43108685 + Missense_Mutation SNP T T G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . TTPAL NM_001039199 exon2 c.T46G p.S16A GTGGCCTCACTCT . 60.0 35.0 59.0 0.0 . 153 USP40 55230 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 234394614 234394614 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . USP40 NM_018218 exon28 c.C3240T p.D1080D CAGCACGTCCTGG . 9.0 9.0 22.0 0.0 . 455 VANGL2 57216 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160388869 160388869 + Silent SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . VANGL2 NM_020335 exon4 c.C270T p.R90R CACACGCATCGCC . 115.0 21.0 67.0 0.0 . 91 VCL 7414 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 10 75830792 75830792 + Frame_Shift_Del DEL G G - novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . VCL NM_003373 exon4 c.450delG p.V150fs AGAGGTGGTGGAG . 106.0 61.0 201.0 0.0 . 93 VWCE 220001 ucsc.edu;bcgsc.ca 37 11 61036446 61036446 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . VWCE NM_152718 exon15 c.C1830T p.S610S AGGGCAGGAGTCC . 20.0 4.0 45.0 0.0 . 91 WDR17 116966 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 177017675 177017675 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . WDR17 NM_170710 exon2 c.C5T p.A2V CTATGGCTTGGAT . 48.0 17.0 121.0 0.0 . 95 WDR18 57418 ucsc.edu;bcgsc.ca 37 19 994280 994280 + Silent SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . WDR18 NM_024100 exon10 c.G1236A p.L412L CAACCTGCGCAAG . 45.0 4.0 63.0 0.0 . 91 WDR65 149465 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 43649280 43649280 + Missense_Mutation SNP G G C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . WDR65 NM_001195831 exon4 c.G493C p.D165H CCACAGGATAACA . 80.0 40.0 140.0 0.0 . 91 WTIP 126374 ucsc.edu;bcgsc.ca 37 19 34986661 34986661 + Silent SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . WTIP NM_001080436 exon7 c.A1137G p.A379A CGTGGCATGTTAC . 39.0 4.0 75.0 0.0 . 68 ZBTB7C 201501 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 45555810 45555810 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZBTB7C NM_001039360 exon3 c.C1681T p.R561C GCGCGCGCCCGAA . 26.0 10.0 33.0 0.0 . 91 ZNF214 7761 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 7021165 7021165 + Missense_Mutation SNP T T G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF214 NM_013249 exon3 c.A1749C p.K583N ACGGCATTTGTAA . 66.0 22.0 111.0 0.0 . 91 ZNF420 147923 ucsc.edu;bcgsc.ca 37 19 37619509 37619509 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF420 NM_144689 exon5 c.C1616T p.A539V GAAAGGCCTTTGC . 45.0 4.0 89.0 0.0 . 90 ZNF493 284443 ucsc.edu;bcgsc.ca 37 19 21607674 21607674 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF493 NM_001076678 exon4 c.A2213G p.D738G CTGGAGACAAACC . 47.0 4.0 64.0 0.0 . 516 ZNF682 91120 bcgsc.ca;mdanderson.org 37 19 20117276 20117276 + Silent SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF682 NM_033196 exon4 c.A1035G p.E345E GCCACATTCTTCA . 38.0 5.0 68.0 0.0 . 92 ZNF695 57116 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 247162655 247162655 + Missense_Mutation SNP T T C novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . . NM_001204221 exon3 c.A254G p.H85R CCTGAGTGTCTGG . 196.0 85.0 310.0 0.0 . . ZNF713 349075 ucsc.edu;bcgsc.ca 37 7 56007647 56007647 + Missense_Mutation SNP A A G novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF713 NM_182633 exon4 c.A1241G p.E414G TATGTGAATATAA . 50.0 4.0 50.0 0.0 . 92 ZNF782 158431 ucsc.edu;bcgsc.ca 37 9 99581617 99581617 + Missense_Mutation SNP G G A novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF782 NM_001001662 exon6 c.C688T p.L230F TAACAAGGGCAGC . 39.0 4.0 93.0 0.0 . 90 ZNF804B 219578 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 88966173 88966173 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF804B NM_181646 exon4 c.C3877T p.P1293S TTTATTCCTACAT . 127.0 62.0 211.0 0.0 . 101 ZNF99 7652 ucsc.edu;bcgsc.ca 37 19 22941840 22941840 + Missense_Mutation SNP C C T novel TCGA-DD-A11C-01A-11D-A12Z-10 TCGA-DD-A11C-11A-11D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq a9cde9a5-c0ff-4c01-8182-81c9ef3920e6 d5d8c783-db2c-487c-9cce-1b76137ddc15 . ZNF99 NM_001080409 exon4 c.G871A p.G291S CTTTGCCACATTC . 42.0 4.0 73.0 0.0 . 24