Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
ABLIM1	3983	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	116417809	116417809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ABLIM1	NM_002313	exon1	c.G151T	p.A51S	TATGAGCGGTGAA	.	55.0	17.0	64.0	0.0	.	153
ACAN	176	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	89385015	89385015	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ACAN	NM_001135	exon5	c.A674G	p.D225G	ACAAGGATGAGTT	.	34.0	17.0	44.0	0.0	.	25
ADAMTSL1	92949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	18639393	18639393	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ADAMTSL1	NM_052866	exon7	c.C818T	p.A273V	TCACAGCAGATTT	.	44.0	16.0	56.0	0.0	.	230
ANKLE2	23141	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	133324833	133324833	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ANKLE2	NM_015114	exon4	c.C932A	p.A311D	AGCTTGGCGGTGA	.	48.0	7.0	105.0	0.0	.	68
ARHGAP12	94134	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	32150410	32150410	+	Silent	SNP	C	C	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ARHGAP12	NM_001270698	exon4	c.G861C	p.G287G	CTGTGTCCCTCTG	.	121.0	29.0	122.0	0.0	.	227
ASB4	51666	ucsc.edu;bcgsc.ca	37	7	95157219	95157219	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ASB4	NM_016116	exon3	c.C582T	p.Y194Y	CTTCTACGTGGAA	.	20.0	4.0	25.0	0.0	.	226
ASNA1	439	broad.mit.edu;mdanderson.org	37	19	12856230	12856230	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ASNA1	NM_004317	exon3	c.G349T	p.E117X	CCTGACGAGTTCT	.	12.0	3.0	14.0	0.0	.	92
ASPH	444	broad.mit.edu;ucsc.edu;mdanderson.org	37	8	62475310	62475310	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ASPH	NM_004318	exon18	c.A1430T	p.Y477F	TCTTCATAAACTT	.	100.0	13.0	63.0	1.0	.	93
ATR	545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	142275251	142275251	+	Silent	SNP	A	A	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ATR	NM_001184	exon9	c.T2052G	p.S684S	GTTACAAGAATTC	.	77.0	18.0	87.0	0.0	.	1139
BOC	91653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	113005642	113005642	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	BOC	NM_033254	exon20	c.C3278A	p.P1093H	AGGAACCTGGAAT	.	33.0	12.0	60.0	0.0	.	157
BRCA1	672	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	41245778	41245778	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	BRCA1	NM_007300	exon10	c.T1770C	p.S590S	GCTTATACTGCTG	.	136.0	13.0	173.0	0.0	.	3415
CCDC150	284992	ucsc.edu;bcgsc.ca;mdanderson.org	37	2	197595663	197595663	+	Silent	SNP	A	A	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001080539	exon26	c.A3063C	p.S1021S	GGAATCAGAACAG	.	46.0	10.0	81.0	1.0	.	.
CCDC169-SOHLH2	100526761	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	36747869	36747869	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001198910	exon14	c.C1191T	p.S397S	AGGAGTGGAGCAC	.	38.0	9.0	50.0	0.0	.	.
CCR6	1235	broad.mit.edu;ucsc.edu;mdanderson.org	37	6	167550438	167550438	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	CCR6	NM_004367	exon3	c.C720T	p.T240T	CAAAACCTTGGTG	.	52.0	9.0	58.0	1.0	.	227
CHD2	1106	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	93510735	93510735	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	CHD2	NM_001271	exon17	c.G2181C	p.Q727H	GAAACAGTATTAC	.	59.0	13.0	63.0	0.0	.	229
COL24A1	255631	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	86554879	86554879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	COL24A1	NM_152890	exon7	c.C1685T	p.P562L	CCAGGGGGGCCCA	.	160.0	40.0	188.0	0.0	.	94
CREBBP	1387	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	3830772	3830772	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	CREBBP	NM_004380	exon8	c.A1784G	p.H595R	GTGACATGTTCGT	.	43.0	10.0	73.0	0.0	.	1807
CST5	1473	broad.mit.edu;ucsc.edu;mdanderson.org	37	20	23856835	23856835	+	Missense_Mutation	SNP	C	C	A	rs146272783	byfrequency;alternate_allele	TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	CST5	NM_001900	exon3	c.G419T	p.R140L	ACTTTCCGGCACT	.	22.0	4.0	23.0	0.0	C|0.998;T|0.002	90
CYP2C8	1558	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	96796969	96796969	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	CYP2C8	NM_000770	exon9	c.T1389C	p.D463D	CTTTAAATCATCA	.	64.0	16.0	92.0	0.0	.	90
DBX2	440097	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	45429822	45429822	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	DBX2	NM_001004329	exon2	c.C479G	p.A160G	GAGGATGCAGGGC	.	33.0	5.0	50.0	0.0	.	90
DGCR6L	85359	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	20307214	20307214	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	DGCR6L	NM_033257	exon2	c.C219T	p.L73L	TTCGGTGAGGTGC	.	54.0	9.0	73.0	0.0	.	90
DLST	1743	bcgsc.ca;mdanderson.org	37	14	75360077	75360077	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	DLST	NM_001933	exon9	c.C622A	p.P208T	GTTGCCCCACCAC	.	72.0	20.0	95.0	2.0	.	227
ESR1	2099	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	152415519	152415519	+	Splice_Site	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ESR1	NM_001122742	exon9	c.1370-1G>A	.	CATTCAGGAGTGT	.	38.0	10.0	49.0	0.0	.	1042
FARSB	10056	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	223494886	223494886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	FARSB	NM_005687	exon9	c.T794C	p.I265T	AGAACTATTTTTG	.	111.0	36.0	143.0	0.0	.	91
FLG	2312	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152286392	152286392	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	FLG	NM_002016	exon3	c.T970C	p.S324P	ACGCAGATCCATG	.	90.0	27.0	128.0	1.0	.	106
FLT3LG	2323	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	49979435	49979435	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	FLT3LG	NM_001204503	exon3	c.G178A	p.V60M	GTCACCGTGGCCT	.	29.0	6.0	52.0	0.0	.	115
GGA3	23163	ucsc.edu;mdanderson.org	37	17	73236489	73236489	+	Silent	SNP	G	G	C	rs149621783	byfrequency;alternate_allele	TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	GGA3	NM_138619	exon12	c.C1197G	p.L399L	GTCGGCGAGGCCT	.	17.0	4.0	15.0	0.0	G|1.000;A|0.000	154
GLE1	2733	broad.mit.edu;mdanderson.org	37	9	131295815	131295815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	GLE1	NM_001499	exon10	c.G1336A	p.D446N	ATCTTTGACAAGA	.	53.0	11.0	53.0	2.0	.	22
GNAS	2778	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	57484420	57484420	+	Missense_Mutation	SNP	C	C	T	rs11554273	bycluster	TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	GNAS,colon,carcinoma,0	GNAS	NM_080425	exon8	c.C2530T	p.R844C	CGCTGCCGTGTCC	.	46.0	18.0	74.0	0.0	C|1.000	4767
GPC1	2817	ucsc.edu;bcgsc.ca	37	2	241401973	241401973	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	GPC1	NM_002081	exon3	c.A691T	p.S231C	GTGGCCAGCGACG	.	17.0	4.0	19.0	0.0	.	153
HECW2	57520	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	197183957	197183957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	HECW2	NM_020760	exon9	c.G1657A	p.G553S	CTGGGCCGCCTTC	.	34.0	7.0	46.0	0.0	.	668
HELZ2	85441	broad.mit.edu;bcgsc.ca;mdanderson.org	37	20	62196722	62196722	+	Silent	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001037335	exon9	c.C3453A	p.S1151S	GCCCGAGGAGGCA	.	14.0	5.0	19.0	0.0	.	.
HIPK2	28996	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	139258131	139258131	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	HIPK2	NM_022740	exon15	c.A3139G	p.I1047V	TGGTGATGTGCTG	.	14.0	5.0	27.0	0.0	.	785
IFNA14	3448	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	21239523	21239523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	IFNA14	NM_002172	exon1	c.G412T	p.D138Y	TGGAGTCCTCATT	.	47.0	18.0	103.0	0.0	.	68
JAKMIP1	152789	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	6087184	6087184	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	JAKMIP1	NM_001099433	exon4	c.C797G	p.P266R	ATCCCGGGCGGGA	.	16.0	5.0	32.0	0.0	.	292
KIF24	347240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	34310818	34310818	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	KIF24	NM_194313	exon2	c.A527G	p.Y176C	GAAAGGTAATTTG	.	133.0	34.0	174.0	0.0	.	22
KRT14	3861	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	39740122	39740122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	KRT14	NM_000526	exon4	c.G817A	p.D273N	CAGCGTCCATCTC	.	43.0	11.0	53.0	1.0	.	91
LHCGR	3973	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	48950602	48950602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	LHCGR	NM_000233	exon6	c.G529T	p.V177L	GTGTTACAGATTC	.	55.0	11.0	82.0	0.0	.	589
LMOD2	442721	broad.mit.edu;bcgsc.ca	37	7	123303229	123303229	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	LMOD2	NM_207163	exon2	c.G1589A	p.R530Q	CAATTCGGGGAAG	.	84.0	7.0	100.0	0.0	.	68
LRRC6	23639	ucsc.edu;bcgsc.ca;mdanderson.org	37	8	133584681	133584681	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	LRRC6	NM_012472	exon12	c.T1274C	p.F425S	TCAGGGAATGAGT	.	357.0	49.0	254.0	2.0	.	92
MAD2L2	10459	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	11736162	11736162	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	MAD2L2	NM_006341	exon6	c.T368A	p.L123H	GCCCGGAGCAGCT	.	15.0	5.0	21.0	0.0	.	659
MFAP3	4238	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	153429404	153429404	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	MFAP3	NM_005927	exon2	c.A122G	p.N41S	CTTACAATGCATC	.	84.0	21.0	120.0	0.0	.	90
MICU1	10367	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	74326487	74326487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001195518	exon2	c.G65T	p.G22V	GATCCTCCATGGT	.	45.0	17.0	77.0	0.0	.	.
MIRLET7BHG	400931	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	46501301	46501301	+	RNA	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	.	.	.	.	ACGCAGGTCCTCT	.	56.0	9.0	131.0	1.0	.	.
N4BP1	9683	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	48595832	48595832	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	N4BP1	NM_153029	exon2	c.G722T	p.G241V	GGAGTCCCAGCTT	.	81.0	24.0	129.0	0.0	.	22
NCOA1	8648	broad.mit.edu;mdanderson.org	37	2	24962370	24962370	+	Silent	SNP	A	A	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	NCOA1	NM_147223	exon16	c.A3271C	p.R1091R	AATATGAGATCAG	.	52.0	8.0	43.0	2.0	.	228
NDRG2	57447	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	21486186	21486186	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	NDRG2	NM_201537	exon15	c.G909A	p.L303L	CTCGGTCAGCTTG	.	27.0	15.0	29.0	0.0	.	154
NMD3	51068	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	160960387	160960387	+	Silent	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	NMD3	NM_015938	exon11	c.C963T	p.C321C	GGAATGCAGCATA	.	52.0	9.0	76.0	1.0	.	91
NR1D1	9572	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	38252734	38252734	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	NR1D1	NM_021724	exon4	c.G566A	p.R189H	TTGAAGCGACATT	.	45.0	12.0	61.0	1.0	.	226
OR2F1	26211	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143657370	143657370	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	OR2F1	NM_012369	exon1	c.T307C	p.F103L	TTATTTTTCTCCC	.	62.0	17.0	95.0	0.0	.	71
PCDHB5	26167	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	5	140516880	140516880	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PCDHB5	NM_015669	exon1	c.G1864C	p.E622Q	AATGGCGAGGTGC	.	11.0	4.0	9.0	0.0	.	95
PCF11	51585	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	82879585	82879585	+	Silent	SNP	G	G	A	rs149809762		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PCF11	NM_015885	exon8	c.G2208A	p.L736L	CGGCCTGGATACA	.	59.0	13.0	91.0	1.0	G|0.998;A|0.002	23
PGBD2	267002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	249211312	249211312	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PGBD2	NM_170725	exon3	c.C529T	p.Q177X	ACGGCTCAGGAAT	.	46.0	12.0	47.0	0.0	.	91
PIGZ	80235	bcgsc.ca;mdanderson.org	37	3	196674072	196674072	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PIGZ	NM_025163	exon3	c.G1696T	p.D566Y	GGTGGTCCCTCCA	.	13.0	7.0	28.0	1.0	.	93
PPIL2	23759	broad.mit.edu;ucsc.edu;mdanderson.org	37	22	22049306	22049306	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PPIL2	NM_014337	exon19	c.G1413A	p.Q471Q	GAGCCAGGGCCCC	.	10.0	6.0	16.0	0.0	.	92
PRDM2	7799	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	14105806	14105806	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PRDM2	NM_015866	exon8	c.C1516T	p.H506Y	AGAGTTCACGAAC	.	39.0	13.0	82.0	0.0	.	116
PSD4	23550	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	113955466	113955466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PSD4	NM_012455	exon14	c.G2600T	p.W867L	CTGACTGGCGCCT	.	26.0	7.0	35.0	0.0	.	229
PTGR1	22949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	114348335	114348335	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PTGR1	NM_001146108	exon5	c.C320T	p.T107I	CACTCTGTCAGCA	.	70.0	18.0	110.0	0.0	.	90
PXDN	7837	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	1638057	1638057	+	Silent	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	PXDN	NM_012293	exon23	c.T4359C	p.P1453P	GGTGGCAGGGGGG	.	27.0	7.0	40.0	0.0	.	166
RARG	5916	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53609161	53609161	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	RARG	NM_000966	exon5	c.A391G	p.N131D	TACAGTTTTTGTC	.	25.0	6.0	39.0	0.0	.	722
RNF43	54894	ucsc.edu;mdanderson.org	37	17	56437569	56437569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	RNF43	NM_017763	exon8	c.G893A	p.C298Y	TCCACACAGTTAC	.	21.0	4.0	28.0	0.0	.	92
SAMD9	54809	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	92733863	92733863	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	SAMD9	NM_001193307	exon2	c.A1548T	p.E516D	AGCTCTTTCTCTT	.	51.0	18.0	71.0	0.0	.	140
SGK196	0	bcgsc.ca;mdanderson.org	37	8	42977499	42977499	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_032237	exon5	c.A532G	p.R178G	CAGCACAGGCTGG	.	22.0	11.0	55.0	2.0	.	.
TMEM187	8269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	153247691	153247691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	TMEM187	NM_003492	exon2	c.G178A	p.V60M	TCACTCGTGAACA	.	36.0	23.0	38.0	0.0	.	130
TMEM233	387890	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	120031811	120031811	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001136534	exon1	c.A158G	p.N53S	CCATCAACATCGT	.	51.0	12.0	85.0	1.0	.	.
TPO	7173	broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	1481014	1481014	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	TPO	NM_175719	exon8	c.G976T	p.A326S	CTGGACGCGTCCA	.	38.0	10.0	62.0	0.0	.	332
TRABD2A	129293	bcgsc.ca;mdanderson.org	37	2	85097547	85097547	+	Silent	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	.	NM_001080824	exon2	c.T471T	p.A157A	GTTTCCGGCAATA	.	30.0	12.0	31.0	1.0	.	.
TRPM8	79054	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	234839334	234839334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	TRPM8,upper_arm,malignant_melanoma,-1	TRPM8	NM_024080	exon3	c.G139A	p.A47T	ATTCAAGCAAATT	.	57.0	13.0	92.0	0.0	.	94
TXNRD1	7296	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	104645406	104645406	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	TXNRD1	.	.	.	.	ATAGATGGTCACT	.	26.0	6.0	45.0	0.0	.	90
WDR17	116966	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	177071281	177071281	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	WDR17	NM_170710	exon16	c.A2207T	p.N736I	CTGCTAATTCTCA	.	73.0	20.0	82.0	1.0	.	95
ZG16B	124220	broad.mit.edu;ucsc.edu;mdanderson.org	37	16	2880751	2880751	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ZG16B	NM_145252	exon3	c.G217T	p.E73X	GACCATGAAATCA	.	35.0	10.0	56.0	0.0	.	91
ZNF616	90317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52618825	52618825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ZNF616	NM_178523	exon4	c.G1592T	p.S531I	CGGTCACTGAAGA	.	58.0	10.0	61.0	0.0	.	90
ZNF675	171392	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	23844915	23844915	+	Splice_Site	SNP	C	C	G	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ZNF675	NM_138330	exon4	c.226+1G>C	.	CACTTACCTGGGG	.	57.0	15.0	51.0	1.0	.	228
ZSWIM2	151112	broad.mit.edu;bcgsc.ca	37	2	187713759	187713759	+	Silent	SNP	G	G	C	novel		TCGA-G3-A7M7-01A-12D-A34Z-10	TCGA-G3-A7M7-10A-01D-A34Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	2e2d5d14-93c7-44fb-bee9-d6bf7c286368	3a264183-655d-4ab5-ade1-24ffbfd0cdb0	.	ZSWIM2	NM_182521	exon1	c.C99G	p.L33L	TCGTAGGAGGTAG	.	57.0	15.0	104.0	2.0	.	93