Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq
ADH4	127	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	100052694	100052694	+	Silent	SNP	C	C	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ADH4	NM_000670	exon6	c.G804C	p.V268V	AAAATCCACACCT	.	98.0	10.0	86.0	0.0	.	228
B4GALT2	8704	ucsc.edu;bcgsc.ca	37	1	44451245	44451245	+	Missense_Mutation	SNP	G	G	A	rs200368860		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	B4GALT2	NM_030587	exon6	c.G1007A	p.R336H	GCTACCGCATGAT	.	39.0	4.0	38.0	0.0	.	92
BIRC6	57448	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	32768519	32768519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	BIRC6	NM_016252	exon62	c.C12503T	p.P4168L	GTCTTCCGGGCTA	.	90.0	12.0	90.0	0.0	.	233
CBLL1	79872	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	107399297	107399297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	CBLL1	NM_024814	exon6	c.A1150G	p.I384V	CCACCAATAACCC	.	89.0	21.0	92.0	0.0	.	229
CDAN1	146059	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	43021296	43021296	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	CDAN1	NM_138477	exon19	c.A2570G	p.N857S	GGCTGGTTGTGGA	.	69.0	6.0	55.0	0.0	.	92
COL14A1	7373	broad.mit.edu;bcgsc.ca	37	8	121238908	121238908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	COL14A1	NM_021110	exon16	c.C1907T	p.T636M	AGGTGACGACAGA	.	73.0	6.0	56.0	0.0	.	543
FAM155A	728215	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	13	108518523	108518523	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	FAM155A	NM_001080396	exon1	c.G422C	p.G141A	CCGCCGCCGCCGC	.	65.0	15.0	50.0	0.0	.	23
FNDC1	84624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	159646689	159646689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	FNDC1	NM_032532	exon8	c.G1007A	p.R336H	CAGTCCGTATTTC	.	78.0	18.0	80.0	0.0	.	138
GADL1	339896	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	30903143	30903143	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	GADL1	NM_207359	exon2	c.A152T	p.E51V	CAGGCCTCTTCAA	.	244.0	18.0	265.0	0.0	.	90
GRID2	2895	broad.mit.edu;bcgsc.ca	37	4	94032016	94032016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	GRID2	NM_001510	exon4	c.G647A	p.R216K	CCATGAGAATAGA	.	129.0	12.0	150.0	1.0	.	159
LGALS2	3957	hgsc.bcm.edu;broad.mit.edu	37	22	37966624	37966626	+	In_Frame_Del	DEL	GTT	GTT	-	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	GTT	GTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LGALS2	NM_006498	exon3	c.206_208del	p.69_70del	CTTCCCGTTGTTC	.	137.0	11.0	125.0	0.0	.	154
LONRF1	91694	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	12600698	12600698	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LONRF1	NM_152271	exon2	c.T815G	p.L272R	TGAAAAAGAACTG	.	222.0	20.0	216.0	0.0	.	91
LRRK1	79705	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	101608980	101608980	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	LRRK1	NM_024652	exon34	c.G5975A	p.R1992K	GCGCCAGGGAGTT	.	112.0	8.0	96.0	0.0	.	602
MKI67	4288	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	129903267	129903267	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MKI67	NM_002417	exon13	c.6837delG	p.M2279fs	TGCTTTCATGTCT	.	205.0	23.0	201.0	0.0	.	519
MRC1	4360	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	10	18122743	18122743	+	Silent	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MRC1	NM_002438	exon4	c.C753T	p.N251N	ACAGAACGCTGAG	.	189.0	18.0	181.0	0.0	.	68
MYH11	4629	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	15815347	15815347	+	Silent	SNP	G	G	T	rs144823441	alternate_allele	TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MYH11	NM_001040114	exon33	c.C4531A	p.R1511R	TGGTCCGCTCGAG	.	182.0	31.0	175.0	0.0	G|1.000;A|0.000	666
MYOM2	9172	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	2017578	2017578	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	MYOM2	NM_003970	exon8	c.A755T	p.D252V	GGGGAGACGAGGA	.	271.0	33.0	272.0	0.0	.	95
NFE2L3	9603	broad.mit.edu;ucsc.edu	37	7	26224602	26224602	+	Silent	SNP	T	T	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	NFE2L3	NM_004289	exon4	c.T1284C	p.N428N	TCACAATAATACC	.	89.0	14.0	84.0	1.0	.	94
NUP50	10762	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	22	45580526	45580526	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	NUP50	NM_007172	exon8	c.A1397G	p.K466R	AGAAAAAGGATGC	.	118.0	7.0	155.0	0.0	.	68
PCSK4	54760	hgsc.bcm.edu;broad.mit.edu	37	19	1487019	1487019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	PCSK4	NM_017573	exon8	c.G901A	p.G301S	GGCCGCCGTTGCC	.	69.0	4.0	50.0	0.0	.	90
SALL1	6299	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	51173735	51173735	+	Missense_Mutation	SNP	C	C	T	rs200755920		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	SALL1	NM_002968	exon2	c.G2398A	p.D800N	AGCTGTCGGGGAC	.	133.0	10.0	144.0	0.0	C|0.999;T|0.000	98
SGCZ	137868	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	13948007	13948007	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	SGCZ	NM_139167	exon8	c.C884A	p.P295Q	CCTGCTGGAGAAA	.	66.0	5.0	66.0	0.0	.	93
USP34	9736	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	61607465	61607465	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	USP34	NM_014709	exon7	c.C853T	p.R285X	TCTGTCGTAACTC	.	84.0	12.0	132.0	0.0	.	579
ZFR2	23217	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	3806099	3806099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ZFR2	NM_015174	exon19	c.C2668T	p.R890W	TCTGCCGGAAGGC	.	88.0	10.0	69.0	0.0	.	70
ZNF700	90592	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	12059950	12059950	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	ZNF700	NM_001271848	exon4	c.T1120C	p.F374L	AAAGGCTTTTATT	.	68.0	9.0	69.0	0.0	.	90
ZNF853	54753	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	6660769	6660769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-RC-A6M5-01A-11D-A32G-10	TCGA-RC-A6M5-10A-01D-A32G-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	5bc57f84-c45f-45a1-9a62-0e2972598fa7	76a1244e-bd30-4dbb-95ee-857b135bb56e	.	.	NM_017560	exon3	c.C147A	p.S49R	TGGGAGCGAGAGT	.	45.0	5.0	42.0	0.0	.	.