Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
INPP5B	3633	hgsc.bcm.edu	hg19	1	38357094	38357094	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	INPP5B	NM_005540	exon8	c.G565A	p.G189R	CCTTCCCATTTGG	.	91.0	9.0	106.0	0.0	.	76	.	.	Atlas-SNP
NRD1	4898	hgsc.bcm.edu	hg19	1	52306125	52306125	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	NRD1	NM_002525	exon2	c.G403C	p.G135R	TTTTACCTTCCAT	.	95.0	15.0	100.0	0.0	.	89	.	.	Atlas-SNP
WDR63	126820	hgsc.bcm.edu	hg19	1	85589863	85589863	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	WDR63	NM_145172	exon19	c.T2041C	p.S681P	CAGAGATCACCTT	.	108.0	41.0	112.0	0.0	.	91	.	.	Atlas-SNP
GFI1	2672	hgsc.bcm.edu	hg19	1	92944171	92944171	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GFI1	NM_005263	exon6	c.T1064C	p.M355T	TTCTTCATGTCTG	.	182.0	9.0	162.0	0.0	.	41	.	.	Atlas-SNP
CCDC18	343099	hgsc.bcm.edu	hg19	1	93704961	93704961	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CCDC18	NM_206886	exon20	c.A2698G	p.M900V	AAAGCAATGCACC	.	421.0	17.0	401.0	0.0	.	93	.	.	Atlas-SNP
CNN3	1266	hgsc.bcm.edu	hg19	1	95363516	95363516	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CNN3	NM_001839	exon7	c.A772G	p.M258V	CACTCATTCCTTT	.	147.0	32.0	142.0	0.0	.	23	.	.	Atlas-SNP
COL11A1	1301	hgsc.bcm.edu	hg19	1	103491357	103491357	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	COL11A1	NM_080629	exon6	c.A932T	p.K311M	GCTACCTTTACCC	.	63.0	18.0	61.0	0.0	.	972	.	.	Atlas-SNP
HSD3B1	3283	hgsc.bcm.edu	hg19	1	120057095	120057095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	HSD3B1	NM_000862	exon4	c.C949T	p.R317C	TTCAACCGCCACA	.	162.0	39.0	129.0	0.0	.	53	.	.	Atlas-SNP
AXDND1	126859	hgsc.bcm.edu	hg19	1	179504037	179504037	+	Missense_Mutation	SNP	G	G	C	rs6425573	bycluster;by2hit2allele;byhapmap	TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	AXDND1	NM_144696	exon25	c.G2971C	p.E991Q	GAAGAAGAACAAC	.	523.0	28.0	342.0	0.0	.	142	.	G|1.000;|0.000	Atlas-SNP
TDRD5	163589	hgsc.bcm.edu	hg19	1	179561766	179561766	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TDRD5	NM_173533	exon2	c.C16G	p.R6G	CAAGAGCGTATAC	.	91.0	5.0	71.0	0.0	.	149	.	.	Atlas-SNP
RGS18	64407	hgsc.bcm.edu	hg19	1	192153515	192153515	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RGS18	NM_130782	exon5	c.T539A	p.V180E	GCAGAGTGTATCA	.	266.0	38.0	191.0	0.0	.	54	.	.	Atlas-SNP
CAMSAP2	23271	hgsc.bcm.edu	hg19	1	200827018	200827018	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	.	NM_203459	exon17	c.C4268T	p.T1423I	CTATCACTAAAAA	.	436.0	71.0	271.0	0.0	.	.	.	.	Atlas-SNP
SYT2	127833	hgsc.bcm.edu	hg19	1	202568364	202568364	+	Silent	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SYT2	NM_177402	exon8	c.C1035T	p.I345I	GAAGGGGATCTCA	.	115.0	16.0	82.0	0.0	.	51	.	.	Atlas-SNP
MDM4	4194	hgsc.bcm.edu	hg19	1	204513690	204513690	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MDM4	NM_002393	exon9	c.A700T	p.T234S	TCAGATACTACAG	.	138.0	6.0	110.0	0.0	.	57	.	.	Atlas-SNP
KLHDC8A	55220	hgsc.bcm.edu	hg19	1	205308358	205308358	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	KLHDC8A	NM_018203	exon4	c.T721C	p.F241L	GCAGGAACTTGGG	.	121.0	26.0	95.0	0.0	.	31	.	.	Atlas-SNP
DNAH14	127602	hgsc.bcm.edu	hg19	1	225510413	225510413	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	DNAH14	NM_001373	exon60	c.T9104C	p.V3035A	ATGCAGTGTGTAT	.	399.0	16.0	242.0	0.0	.	300	.	.	Atlas-SNP
OBSCN	84033	hgsc.bcm.edu	hg19	1	228444576	228444576	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OBSCN	NM_001271223	exon16	c.T4810C	p.Y1604H	GGGGAGTACAGCT	.	322.0	81.0	197.0	0.0	.	2142	.	.	Atlas-SNP
CHRM3	1131	hgsc.bcm.edu	hg19	1	240071874	240071874	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CHRM3	NM_000740	exon5	c.A1123C	p.S375R	GGTCACAGCACCA	.	397.0	24.0	214.0	0.0	.	118	.	.	Atlas-SNP
OR2M3	127062	hgsc.bcm.edu	hg19	1	248367250	248367250	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	OR2M3,NS,carcinoma,0,1	OR2M3	NM_001004689	exon1	c.A881G	p.N294S	TCCGCAACAAGGA	.	156.0	7.0	96.0	0.0	.	116	.	.	Atlas-SNP
GREB1	9687	hgsc.bcm.edu	hg19	2	11773162	11773162	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GREB1	NM_014668	exon28	c.A4964G	p.D1655G	TGGTGGATGTCAA	.	68.0	7.0	116.0	0.0	.	308	.	.	Atlas-SNP
LPIN1	23175	hgsc.bcm.edu	hg19	2	11911691	11911691	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	LPIN1	NM_001261428	exon5	c.A629G	p.K210R	GGAGAAAGTCACA	.	161.0	24.0	172.0	0.0	.	99	.	.	Atlas-SNP
RHOB	388	hgsc.bcm.edu	hg19	2	20647549	20647549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	RHOB,NS,carcinoma,0,1	RHOB	NM_004040	exon1	c.C323T	p.P108L	TCTGTCCCAATGT	.	161.0	9.0	229.0	0.0	.	18	.	.	Atlas-SNP
EHD3	30845	hgsc.bcm.edu	hg19	2	31489355	31489355	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	EHD3,NS,carcinoma,0,1	EHD3	NM_014600	exon6	c.G1393A	p.A465T	ACAGGCGCTAATG	.	82.0	22.0	99.0	0.0	.	90	.	.	Atlas-SNP
VRK2	7444	hgsc.bcm.edu	hg19	2	58386637	58386637	+	Silent	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	VRK2	NM_001130480	exon13	c.A1336C	p.R446R	AAGTCAAGATCTC	.	159.0	21.0	169.0	0.0	.	46	.	.	Atlas-SNP
BCL11A	53335	hgsc.bcm.edu	hg19	2	60688438	60688438	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	BCL11A	NM_018014	exon4	c.G1609A	p.G537S	CGTCGCCCACGCC	.	38.0	8.0	72.0	0.0	.	298	.	.	Atlas-SNP
PNO1	56902	hgsc.bcm.edu	hg19	2	68385547	68385547	+	Silent	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PNO1	NM_020143	exon2	c.A243C	p.P81P	AGTCCCAGCTAAC	.	108.0	29.0	155.0	0.0	.	17	.	.	Atlas-SNP
GALNT5	11227	hgsc.bcm.edu	hg19	2	158115035	158115035	+	Silent	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GALNT5	NM_014568	exon1	c.A441G	p.R147R	CGGGAGAGGCACC	.	83.0	10.0	81.0	0.0	.	112	.	.	Atlas-SNP
IDH1	3417	hgsc.bcm.edu	hg19	2	209108256	209108256	+	Missense_Mutation	SNP	T	T	G	rs374340555	alternate_allele	TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	IDH1	NM_005896	exon6	c.A593C	p.Q198P	GCCATTTGGAAGG	.	56.0	13.0	65.0	0.0	.	6310	.	.	Atlas-SNP
TNS1	7145	hgsc.bcm.edu	hg19	2	218713775	218713775	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TNS1	NM_022648	exon17	c.A1090T	p.S364C	ACAGGCTCCCATC	.	65.0	14.0	58.0	0.0	.	251	.	.	Atlas-SNP
COL4A4	1286	hgsc.bcm.edu	hg19	2	227920768	227920768	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	COL4A4	NM_000092	exon30	c.G2609T	p.G870V	GGGAGGCCTTTCA	.	103.0	5.0	134.0	0.0	.	215	.	.	Atlas-SNP
CNTN4	152330	hgsc.bcm.edu	hg19	3	2777928	2777928	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CNTN4	NM_175607	exon5	c.A85G	p.I29V	ATTTTTATTCAAG	.	80.0	14.0	104.0	0.0	.	335	.	.	Atlas-SNP
DYNC1LI1	51143	hgsc.bcm.edu	hg19	3	32612261	32612261	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	DYNC1LI1	NM_016141	exon1	c.T2A	p.M1K	GCCGCCATCTTGG	.	140.0	17.0	169.0	0.0	.	23	.	.	Atlas-SNP
DNAH12	201625	hgsc.bcm.edu	hg19	3	57445491	57445491	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	DNAH12,colon,carcinoma,0,1	DNAH12	NM_178504	exon20	c.G2690T	p.R897L	TGTATTCGAATCA	.	57.0	15.0	54.0	0.0	.	182	.	.	Atlas-SNP
EPHA3	2042	hgsc.bcm.edu	hg19	3	89156944	89156944	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EPHA3	NM_005233	exon1	c.C46G	p.L16V	TCTGTTCTCGACA	.	55.0	6.0	72.0	0.0	.	501	.	.	Atlas-SNP
EPHA3	2042	hgsc.bcm.edu	hg19	3	89478259	89478259	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EPHA3	NM_005233	exon12	c.A2078G	p.K693R	TAGGTAAGCCAGT	.	96.0	8.0	122.0	0.0	.	501	.	.	Atlas-SNP
KALRN	8997	hgsc.bcm.edu	hg19	3	124438224	124438224	+	Silent	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	KALRN	NM_001024660	exon60	c.A8868G	p.A2956A	CCTAGCATGCTTC	.	108.0	31.0	135.0	0.0	.	556	.	.	Atlas-SNP
TIPARP	25976	hgsc.bcm.edu	hg19	3	156396043	156396043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TIPARP	NM_015508	exon2	c.C557T	p.P186L	ATGTTCCAGGCAT	.	123.0	6.0	113.0	0.0	.	50	.	.	Atlas-SNP
WDR49	151790	hgsc.bcm.edu	hg19	3	167196762	167196762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	WDR49	NM_178824	exon15	c.G1998T	p.E666D	GTTTTTCTCATCA	.	80.0	16.0	59.0	0.0	.	188	.	.	Atlas-SNP
UGT2B11	10720	hgsc.bcm.edu	hg19	4	70079851	70079851	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	UGT2B11,colon,carcinoma,0,1	UGT2B11	NM_001073	exon1	c.T590C	p.V197A	GACATAACAATAG	.	165.0	8.0	196.0	0.0	.	92	.	.	Atlas-SNP
LIN54	132660	hgsc.bcm.edu	hg19	4	83861045	83861045	+	Silent	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	LIN54	NM_194282	exon6	c.A1239G	p.K413K	TACTTGTTTGACA	.	127.0	11.0	174.0	0.0	.	50	.	.	Atlas-SNP
FAT4	79633	hgsc.bcm.edu	hg19	4	126240520	126240520	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FAT4	NM_024582	exon1	c.A2954C	p.Y985S	CAGTTTATGTCCA	.	65.0	6.0	59.0	0.0	.	1752	.	.	Atlas-SNP
FAT4	79633	hgsc.bcm.edu	hg19	4	126242187	126242187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FAT4	NM_024582	exon1	c.G4621T	p.A1541S	CCATCAGCTGTGA	.	91.0	4.0	130.0	0.0	.	1752	.	.	Atlas-SNP
F11	2160	hgsc.bcm.edu	hg19	4	187201692	187201692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	F11	NM_000128	exon10	c.G1093A	p.G365S	AGAGGAGGCATCT	.	178.0	18.0	218.0	0.0	.	65	.	.	Atlas-SNP
KIAA0947	23379	hgsc.bcm.edu	hg19	5	5464791	5464791	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	KIAA0947_ENST00000296564,right_upper_lobe,carcinoma,0,1	KIAA0947	NM_015325	exon13	c.G5344C	p.D1782H	CCTGCTGACTGTA	.	202.0	42.0	144.0	0.0	.	301	.	.	Atlas-SNP
SLC1A3	6507	hgsc.bcm.edu	hg19	5	36629633	36629633	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SLC1A3	NM_004172	exon3	c.T263C	p.L88P	AACTTCTGATGAG	.	146.0	44.0	133.0	0.0	.	88	.	.	Atlas-SNP
NIPBL	25836	hgsc.bcm.edu	hg19	5	36976040	36976040	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	NIPBL	NM_015384	exon9	c.T1031C	p.M344T	CGGCAATGTATGA	.	246.0	70.0	231.0	0.0	.	513	.	.	Atlas-SNP
EGFLAM	133584	hgsc.bcm.edu	hg19	5	38435262	38435262	+	Silent	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EGFLAM	NM_001205301	exon16	c.C2190T	p.C730C	TAAGTGCAACACA	.	117.0	35.0	85.0	0.0	.	302	.	.	Atlas-SNP
POLK	51426	hgsc.bcm.edu	hg19	5	74880726	74880726	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	POLK	NM_016218	exon9	c.G1201T	p.G401C	TCCTTGGGTCTAG	.	185.0	42.0	199.0	0.0	.	123	.	.	Atlas-SNP
MCTP1	79772	hgsc.bcm.edu	hg19	5	94204080	94204080	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	MCTP1,NS,carcinoma,0,2	MCTP1	NM_024717	exon17	c.C2394A	p.C798X	ATCAAAGCAACTA	.	111.0	22.0	110.0	0.0	.	110	.	.	Atlas-SNP
MCTP1	79772	hgsc.bcm.edu	hg19	5	94204081	94204081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MCTP1	NM_024717	exon17	c.G2393A	p.C798Y	TCAAAGCAACTAT	.	109.0	22.0	111.0	0.0	.	110	.	.	Atlas-SNP
FBN2	2201	hgsc.bcm.edu	hg19	5	127610297	127610297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FBN2	NM_001999	exon60	c.G7673A	p.C2558Y	GGTGGACATTTAC	.	127.0	6.0	169.0	0.0	.	858	.	.	Atlas-SNP
GRIA1	2890	hgsc.bcm.edu	hg19	5	153144134	153144134	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GRIA1	NM_001258021	exon12	c.A1994G	p.K665R	TAGCGAAGCAGAC	.	121.0	12.0	109.0	0.0	.	321	.	.	Atlas-SNP
KIF4B	285643	hgsc.bcm.edu	hg19	5	154393731	154393731	+	Silent	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	KIF4B	NM_001099293	exon1	c.G312A	p.A104A	CACTGCGGAGCAG	.	322.0	24.0	296.0	0.0	.	307	.	.	Atlas-SNP
SH3PXD2B	285590	hgsc.bcm.edu	hg19	5	171766310	171766310	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SH3PXD2B	NM_001017995	exon13	c.A1799C	p.H600P	ACCTTGTGGCCAC	.	77.0	23.0	70.0	0.0	.	91	.	.	Atlas-SNP
RASGEF1C	255426	hgsc.bcm.edu	hg19	5	179555536	179555536	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RASGEF1C	NM_175062	exon5	c.A513C	p.E171D	CAGACCTTCTGGC	.	81.0	5.0	90.0	0.0	.	81	.	.	Atlas-SNP
SLC44A4	80736	hgsc.bcm.edu	hg19	6	31839271	31839271	+	Silent	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SLC44A4	NM_025257	exon8	c.C597T	p.T199T	TATGGTGGTGTCA	.	104.0	5.0	114.0	0.0	.	67	.	.	Atlas-SNP
EPHA7	2045	hgsc.bcm.edu	hg19	6	93956641	93956641	+	Silent	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EPHA7	NM_004440	exon15	c.T2595A	p.L865L	CTGGTGAAGGCCA	.	162.0	7.0	171.0	0.0	.	251	.	.	Atlas-SNP
KIAA1919	91749	hgsc.bcm.edu	hg19	6	111587870	111587870	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	KIAA1919	NM_153369	exon4	c.A1105G	p.I369V	ATGGCTATTCCTG	.	98.0	24.0	113.0	0.0	.	54	.	.	Atlas-SNP
TCF21	6943	hgsc.bcm.edu	hg19	6	134210652	134210652	+	Silent	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TCF21	NM_003206	exon1	c.G117A	p.E39E	CACCGAGGAGAGC	.	159.0	34.0	183.0	0.0	.	30	.	.	Atlas-SNP
FNDC1	84624	hgsc.bcm.edu	hg19	6	159646690	159646690	+	Silent	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	FNDC1,NS,carcinoma,+2,1	FNDC1	NM_032532	exon8	c.T1008C	p.R336R	AGTCCGTATTTCA	.	122.0	10.0	97.0	0.0	.	250	.	.	Atlas-SNP
C6orf70	55780	hgsc.bcm.edu	hg19	6	170156445	170156445	+	Silent	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	C6orf70	NM_018341	exon4	c.A327G	p.E109E	TCCTGAAATATTT	.	118.0	12.0	112.0	0.0	.	63	.	.	Atlas-SNP
CHST12	55501	hgsc.bcm.edu	hg19	7	2473077	2473077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	CHST12,NS,carcinoma,0,1	CHST12	NM_018641	exon2	c.G803T	p.R268L	TCTACCGCAAGTT	.	39.0	2.0	44.0	0.0	.	39	.	.	Atlas-SNP
DGKI	9162	hgsc.bcm.edu	hg19	7	137092695	137092695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	DGKI	NM_004717	exon31	c.C2870A	p.P957Q	TGGTCTGGTCCCT	.	129.0	9.0	154.0	0.0	.	335	.	.	Atlas-SNP
AGAP3	116988	hgsc.bcm.edu	hg19	7	150814237	150814237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	AGAP3	NM_001042535	exon3	c.C446T	p.T149M	ATCTGACGGGGAC	.	114.0	21.0	115.0	0.0	.	121	.	.	Atlas-SNP
REEP4	80346	hgsc.bcm.edu	hg19	8	21998971	21998971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	REEP4	NM_025232	exon1	c.C25A	p.L9M	CCACCAGGCGACA	.	129.0	29.0	113.0	0.0	.	13	.	.	Atlas-SNP
PREX2	80243	hgsc.bcm.edu	hg19	8	69021855	69021855	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PREX2	NM_024870	exon25	c.A3143T	p.D1048V	AAATAGATGAGTA	.	185.0	25.0	155.0	0.0	.	614	.	.	Atlas-SNP
EIF3H	8667	hgsc.bcm.edu	hg19	8	117671203	117671203	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EIF3H	NM_003756	exon3	c.A306C	p.E102D	CATCATTTCCATC	.	160.0	22.0	159.0	0.0	.	28	.	.	Atlas-SNP
MED30	90390	hgsc.bcm.edu	hg19	8	118540924	118540924	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MED30	NM_080651	exon2	c.A212T	p.Y71F	GAACATATCAAGA	.	160.0	9.0	150.0	0.0	.	15	.	.	Atlas-SNP
EPPK1	83481	hgsc.bcm.edu	hg19	8	144942098	144942098	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	EPPK1,NS,NS,0,1	EPPK1	NM_031308	exon1	c.A5324G	p.H1775R	AACACGTGTCTCG	.	177.0	33.0	123.0	0.0	.	199	.	.	Atlas-SNP
OPLAH	26873	hgsc.bcm.edu	hg19	8	145114666	145114666	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OPLAH	NM_017570	exon3	c.C199T	p.Q67X	GCGGCTGGTCCCG	.	48.0	10.0	37.0	0.0	.	78	.	.	Atlas-SNP
RECQL4	9401	hgsc.bcm.edu	hg19	8	145739845	145739845	+	Missense_Mutation	SNP	C	C	T	rs375562152		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RECQL4	NM_004260	exon10	c.G1685A	p.R562Q	GATTCCCGTTGCT	.	70.0	27.0	67.0	0.0	.	75	.	.	Atlas-SNP
RLN1	6013	hgsc.bcm.edu	hg19	9	5335462	5335462	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RLN1	NM_006911	exon2	c.T347A	p.V116E	GCAGGTACATACT	.	79.0	9.0	73.0	0.0	.	16	.	.	Atlas-SNP
TAF1L	138474	hgsc.bcm.edu	hg19	9	32632416	32632416	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TAF1L	NM_153809	exon1	c.A3162T	p.E1054D	AGCCTGTTCTGTT	.	181.0	37.0	171.0	0.0	.	382	.	.	Atlas-SNP
SPATA31C1	441452	hgsc.bcm.edu	hg19	9	90534168	90534168	+	Splice_Site	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	.	NM_001145124	exon2	c.190-2A>C	.	TCTCCCAGCGTCA	.	302.0	15.0	352.0	0.0	.	.	.	.	Atlas-SNP
OR13C5	138799	hgsc.bcm.edu	hg19	9	107360936	107360936	+	Silent	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR13C5	NM_001004482	exon1	c.G759T	p.G253G	GATGGTCCCACAG	.	126.0	33.0	164.0	0.0	.	60	.	.	Atlas-SNP
OR1Q1	158131	hgsc.bcm.edu	hg19	9	125377800	125377800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR1Q1	NM_012364	exon1	c.C784A	p.P262T	TTCCGGCCCCTTT	.	128.0	29.0	138.0	0.0	.	46	.	.	Atlas-SNP
SVIL	6840	hgsc.bcm.edu	hg19	10	29822162	29822162	+	Silent	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SVIL	NM_021738	exon8	c.G1134A	p.K378K	CACTAGCTTGGCG	.	69.0	7.0	105.0	0.0	.	226	.	.	Atlas-SNP
PRKG1	5592	hgsc.bcm.edu	hg19	10	53822361	53822361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PRKG1	NM_006258	exon7	c.G905T	p.G302V	GAAAAGGAGACTG	.	136.0	30.0	144.0	0.0	.	167	.	.	Atlas-SNP
PRKG1	5592	hgsc.bcm.edu	hg19	10	53822362	53822362	+	Silent	SNP	A	A	T	rs145917628	bycluster;byfrequency;by1000genomes;alternate_allele	TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PRKG1	NM_006258	exon7	c.A906T	p.G302G	AAAAGGAGACTGG	.	136.0	30.0	146.0	0.0	.	167	.	A|0.998;C|0.002	Atlas-SNP
LIPF	8513	hgsc.bcm.edu	hg19	10	90435976	90435976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	LIPF	NM_001198829	exon10	c.C929A	p.S310Y	TTAAGTCTGGGAA	.	187.0	58.0	216.0	0.0	.	62	.	.	Atlas-SNP
MUC2	4583	hgsc.bcm.edu	hg19	11	1092362	1092362	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MUC2	NM_002457	exon30	c.A4181T	p.K1394M	TGGATAAGTGTAT	.	131.0	8.0	153.0	0.0	.	614	.	.	Atlas-SNP
OR51L1	119682	hgsc.bcm.edu	hg19	11	5020271	5020271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	OR51L1,NS,carcinoma,0,1	OR51L1	NM_001004755	exon1	c.C59T	p.P20L	GTTTTCCTGGACT	.	138.0	12.0	134.0	0.0	.	60	.	.	Atlas-SNP
OR2AG1	144125	hgsc.bcm.edu	hg19	11	6806278	6806278	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR2AG1	NM_001004489	exon1	c.T10C	p.W4R	GAGCTCTGGAACT	.	89.0	10.0	93.0	0.0	.	57	.	.	Atlas-SNP
SVIP	258010	hgsc.bcm.edu	hg19	11	22851254	22851254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SVIP	NM_148893	exon1	c.C41A	p.P14H	GGCGTGGGAGGCG	.	219.0	41.0	292.0	0.0	.	10	.	.	Atlas-SNP
OR5J2	282775	hgsc.bcm.edu	hg19	11	55944169	55944169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR5J2	NM_001005492	exon1	c.G76T	p.V26L	AAAGCTGTGCTTT	.	71.0	10.0	111.0	0.0	.	98	.	.	Atlas-SNP
OR8K3	219473	hgsc.bcm.edu	hg19	11	56086057	56086057	+	Missense_Mutation	SNP	T	T	G	rs141217471	alternate_allele	TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR8K3	NM_001005202	exon1	c.T275G	p.I92S	ATATAATTTCTTA	.	144.0	6.0	147.0	0.0	.	92	.	T|1.000;A|0.000	Atlas-SNP
MS4A4A	51338	hgsc.bcm.edu	hg19	11	60068517	60068517	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MS4A4A	NM_148975	exon4	c.C374G	p.T125S	TTAGAACTACAAA	.	29.0	8.0	38.0	0.0	.	76	.	.	Atlas-SNP
MS4A10	341116	hgsc.bcm.edu	hg19	11	60563034	60563034	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MS4A10	NM_206893	exon6	c.A499C	p.I167L	GTCCACATCCAGA	.	41.0	7.0	57.0	0.0	.	38	.	.	Atlas-SNP
GAB2	9846	hgsc.bcm.edu	hg19	11	77991812	77991812	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GAB2	NM_080491	exon2	c.G211A	p.A71T	GGCCTGCATCTAC	.	99.0	14.0	99.0	0.0	.	63	.	.	Atlas-SNP
PRDM10	56980	hgsc.bcm.edu	hg19	11	129801056	129801056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PRDM10	NM_020228	exon11	c.C1385T	p.P462L	AGCTGAGGGATTG	.	69.0	6.0	85.0	0.0	.	120	.	.	Atlas-SNP
ZNF384	171017	hgsc.bcm.edu	hg19	12	6787319	6787319	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	ZNF384	NM_133476	exon6	c.C660A	p.D220E	CTGATGGTCATCA	.	29.0	8.0	46.0	0.0	.	102	.	.	Atlas-SNP
TAS2R7	50837	hgsc.bcm.edu	hg19	12	10955114	10955114	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TAS2R7	NM_023919	exon1	c.T56A	p.V19E	ATCCCCACTGAAA	.	95.0	13.0	119.0	0.0	.	35	.	.	Atlas-SNP
CEP290	80184	hgsc.bcm.edu	hg19	12	88508214	88508214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CEP290	NM_025114	exon20	c.C2035A	p.L679I	TTTCAAGGCTAGG	.	84.0	4.0	76.0	0.0	.	195	.	.	Atlas-SNP
PLXNC1	10154	hgsc.bcm.edu	hg19	12	94697637	94697637	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PLXNC1	NM_005761	exon29	c.T4492G	p.S1498A	TCATCCTCAGAAA	.	243.0	23.0	310.0	0.0	.	135	.	.	Atlas-SNP
CCDC63	160762	hgsc.bcm.edu	hg19	12	111345215	111345215	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CCDC63	NM_152591	exon12	c.G1627A	p.V543M	AAGGAAGTGCGCG	.	79.0	6.0	97.0	0.0	.	89	.	.	Atlas-SNP
FLT1	2321	hgsc.bcm.edu	hg19	13	29041086	29041086	+	Silent	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FLT1	NM_002019	exon3	c.T342C	p.T114T	CTTTGAAGTAGGT	.	71.0	7.0	100.0	0.0	.	393	.	.	Atlas-SNP
FNDC3A	22862	hgsc.bcm.edu	hg19	13	49649455	49649455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FNDC3A	NM_001079673	exon3	c.G130A	p.A44T	GGAGAAGCATTTA	.	280.0	16.0	404.0	0.0	.	93	.	.	Atlas-SNP
OR4K1	79544	hgsc.bcm.edu	hg19	14	20403852	20403852	+	Silent	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	OR4K1	NM_001004063	exon1	c.G27A	p.V9V	GATGGTGTCTGAG	.	97.0	39.0	93.0	0.0	.	108	.	.	Atlas-SNP
FSIP1	161835	hgsc.bcm.edu	hg19	15	40005705	40005705	+	Silent	SNP	G	G	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FSIP1	NM_152597	exon10	c.C1128G	p.R376R	CAGATCGCGTTGC	.	104.0	31.0	98.0	0.0	.	53	.	.	Atlas-SNP
HERC1	8925	hgsc.bcm.edu	hg19	15	63970130	63970130	+	Silent	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	HERC1	NM_003922	exon37	c.T6984C	p.T2328T	GCGCCCAGTTTGC	.	59.0	4.0	87.0	0.0	.	624	.	.	Atlas-SNP
IGDCC4	57722	hgsc.bcm.edu	hg19	15	65694784	65694784	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	IGDCC4	NM_020962	exon4	c.T605C	p.V202A	TCCTGAACATCCA	.	74.0	9.0	98.0	0.0	.	95	.	.	Atlas-SNP
CRAMP1L	57585	hgsc.bcm.edu	hg19	16	1706116	1706116	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	CRAMP1L	NM_020825	exon9	c.G1358C	p.G453A	AGAGTGGGCAGGG	.	132.0	6.0	142.0	0.0	.	60	.	.	Atlas-SNP
TP53	7157	hgsc.bcm.edu	hg19	17	7578461	7578461	+	Missense_Mutation	SNP	C	C	A	rs121912654		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	TP53_ENST00000545858,NS,carcinoma,+1,5	TP53	NM_000546	exon5	c.G469T	p.V157F	CGCGGACGCGGGT	.	111.0	48.0	118.0	0.0	.	33396	.	.	Atlas-SNP
DNAH9	1770	hgsc.bcm.edu	hg19	17	11783485	11783485	+	Silent	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	DNAH9	NM_001372	exon54	c.C10569T	p.P3523P	GGGACCCCTGCTT	.	74.0	4.0	83.0	0.0	.	695	.	.	Atlas-SNP
GPR179	440435	hgsc.bcm.edu	hg19	17	36486669	36486669	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GPR179	NM_001004334	exon11	c.T2783A	p.L928Q	TGAGGCAGCCTTC	.	53.0	11.0	44.0	0.0	.	170	.	.	Atlas-SNP
EXOC7	23265	hgsc.bcm.edu	hg19	17	74084172	74084172	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	EXOC7	NM_001145297	exon12	c.A1484G	p.K495R	CCGTCCTTCGGCA	.	64.0	19.0	66.0	0.0	.	47	.	.	Atlas-SNP
FASN	2194	hgsc.bcm.edu	hg19	17	80038728	80038728	+	Silent	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FASN	NM_004104	exon39	c.G6666T	p.L2222L	CACCAGCAGGGAG	.	96.0	9.0	111.0	0.0	.	154	.	.	Atlas-SNP
RNF152	220441	hgsc.bcm.edu	hg19	18	59483459	59483459	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RNF152	NM_173557	exon2	c.G238A	p.A80T	GAATGGCGATGAC	.	85.0	7.0	123.0	0.0	.	37	.	.	Atlas-SNP
FZR1	51343	hgsc.bcm.edu	hg19	19	3531921	3531921	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FZR1	NM_001136198	exon9	c.G836A	p.W279X	TGGCCTGGAATGC	.	58.0	5.0	76.0	0.0	.	42	.	.	Atlas-SNP
CATSPERD	257062	hgsc.bcm.edu	hg19	19	5778649	5778649	+	Missense_Mutation	SNP	C	C	T	rs373865922		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	.	NM_152784	exon22	c.C2359T	p.R787C	CCGGGACGCCACC	.	140.0	10.0	184.0	0.0	.	.	.	.	Atlas-SNP
SH2D3A	10045	hgsc.bcm.edu	hg19	19	6755043	6755043	+	Silent	SNP	G	G	A	rs145201987		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	SH2D3A	NM_005490	exon5	c.C780T	p.A260A	CTCCTCGGCCTCC	.	53.0	16.0	77.0	0.0	.	53	.	G|1.000;A|0.000	Atlas-SNP
ZNF729	100287226	hgsc.bcm.edu	hg19	19	22487545	22487545	+	Silent	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	ZNF729	NM_001242680	exon3	c.T213C	p.P71P	AGAGCCTTGGAAT	.	115.0	5.0	129.0	0.0	.	78	.	.	Atlas-SNP
DPY19L3	147991	hgsc.bcm.edu	hg19	19	32930029	32930029	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	DPY19L3	NM_001172774	exon7	c.C608T	p.T203I	ATACCACAAGAGT	.	117.0	23.0	88.0	0.0	.	70	.	.	Atlas-SNP
RYR1	6261	hgsc.bcm.edu	hg19	19	38960049	38960049	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RYR1	NM_001042723	exon27	c.G3661T	p.G1221C	CAGGAAGGCTTCG	.	96.0	36.0	75.0	0.0	.	708	.	.	Atlas-SNP
GLTSCR1	29998	hgsc.bcm.edu	hg19	19	48185376	48185376	+	Silent	SNP	C	C	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GLTSCR1	NM_015711	exon7	c.C2250G	p.P750P	GGCCCCCGACAGC	.	115.0	20.0	97.0	0.0	.	79	.	.	Atlas-SNP
IL4I1	259307	hgsc.bcm.edu	hg19	19	50397537	50397537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	IL4I1	NM_172374	exon7	c.G621T	p.M207I	GAGAGCCATCTGG	.	82.0	23.0	71.0	0.0	.	50	.	.	Atlas-SNP
KLK6	5653	hgsc.bcm.edu	hg19	19	51466671	51466671	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	KLK6,NS,carcinoma,0,1	KLK6	NM_001012964	exon4	c.G332T	p.R111L	GCCAGGCGCAACA	.	100.0	20.0	72.0	0.0	.	35	.	.	Atlas-SNP
ZNF616	90317	hgsc.bcm.edu	hg19	19	52618477	52618477	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	ZNF616	NM_178523	exon4	c.A1940G	p.H647R	CTAAGATGGACAC	.	107.0	11.0	96.0	0.0	.	109	.	.	Atlas-SNP
MYH7B	57644	hgsc.bcm.edu	hg19	20	33575452	33575452	+	Missense_Mutation	SNP	G	G	A	rs371353626		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MYH7B	NM_020884	exon17	c.G1366A	p.V456M	GAGTACGTGACCA	.	132.0	27.0	167.0	0.0	.	145	.	.	Atlas-SNP
TOX2	84969	hgsc.bcm.edu	hg19	20	42697300	42697300	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TOX2	NM_001098797	exon9	c.A1495T	p.R499W	CTCCCCAGGGACA	.	78.0	16.0	107.0	0.0	.	158	.	.	Atlas-SNP
NPEPL1	79716	hgsc.bcm.edu	hg19	20	57276110	57276110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	NPEPL1	NM_024663	exon6	c.G718T	p.A240S	CCCCCAGCCCTGG	.	146.0	7.0	111.0	0.0	.	36	.	.	Atlas-SNP
COL9A3	1299	hgsc.bcm.edu	hg19	20	61453479	61453479	+	Missense_Mutation	SNP	C	C	T	rs373399710	alternate_allele	TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	COL9A3	NM_001853	exon9	c.C440T	p.P147L	GACTCCCCGGCCT	.	406.0	73.0	319.0	0.0	.	70	.	.	Atlas-SNP
BCL2L13	23786	hgsc.bcm.edu	hg19	22	18171844	18171844	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	BCL2L13	NM_001270726	exon3	c.G394C	p.G132R	CATCTTGGAGAAA	.	121.0	6.0	124.0	0.0	.	27	.	.	Atlas-SNP
PIWIL3	440822	hgsc.bcm.edu	hg19	22	25144937	25144937	+	Silent	SNP	G	G	T	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PIWIL3	NM_001008496	exon12	c.C1386A	p.T462T	AAAATTGGTATCA	.	68.0	7.0	84.0	0.0	.	115	.	.	Atlas-SNP
MYO18B	84700	hgsc.bcm.edu	hg19	22	26222449	26222449	+	Silent	SNP	G	G	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	MYO18B	NM_032608	exon14	c.G2769C	p.V923V	GGCTGTGGTCTCA	.	92.0	15.0	91.0	0.0	.	322	.	.	Atlas-SNP
TUBGCP6	85378	hgsc.bcm.edu	hg19	22	50664306	50664306	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	TUBGCP6	NM_020461	exon10	c.A1900G	p.K634E	TCTCCTTCAACTC	.	89.0	6.0	116.0	0.0	.	132	.	.	Atlas-SNP
RBM10	8241	hgsc.bcm.edu	hg19	X	47030585	47030585	+	Missense_Mutation	SNP	T	T	G	rs377667483		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	RBM10	NM_001204468	exon4	c.T555G	p.D185E	GGAGGATGAGGAG	.	72.0	5.0	54.0	0.0	.	117	.	.	Atlas-SNP
PCDH11X	27328	hgsc.bcm.edu	hg19	X	91137937	91137937	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PCDH11X	NM_032967	exon6	c.G3065A	p.C1022Y	AAATCTGCAGTGA	.	460.0	271.0	421.0	1.0	.	714	.	.	Atlas-SNP
GLA	2717	hgsc.bcm.edu	hg19	X	100662799	100662799	+	Silent	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	GLA	NM_000169	exon1	c.A93T	p.A31A	GTCCAGTGCTCTA	.	222.0	12.0	140.0	0.0	.	43	.	.	Atlas-SNP
IGSF1	3547	hgsc.bcm.edu	hg19	X	130420435	130420435	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	IGSF1	NM_001555	exon3	c.A73C	p.M25L	GACTCATCCCTGA	.	109.0	5.0	73.0	0.0	.	231	.	.	Atlas-SNP
ARHGAP4	393	hgsc.bcm.edu	hg19	X	153173335	153173335	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	ARHGAP4	NM_001164741	exon23	c.A2809T	p.T937S	AGGTGGTAGATGC	.	114.0	12.0	139.0	0.0	.	103	.	.	Atlas-SNP
ARHGAP4	393	hgsc.bcm.edu	hg19	X	153173337	153173337	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	ARHGAP4	NM_001164741	exon23	c.C2807T	p.S936F	GTGGTAGATGCTG	.	115.0	8.0	144.0	0.0	.	103	.	.	Atlas-SNP
IGF2	3481	hgsc.bcm.edu	hg19	11	2154351	2154351	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	IGF2	NM_001127598	exon5	c.578delG	p.R193fs	.	.	147.0	32.0	185.0	0.0	.	54	.	.	Atlas-INDEL
FAU	2197	hgsc.bcm.edu	hg19	11	64888473	64888473	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	FAU	NM_001997	exon4	c.257delT	p.V86fs	.	.	119.0	15.0	145.0	0.0	.	17	.	.	Atlas-INDEL
VIPAS39	63894	hgsc.bcm.edu	hg19	14	77919642	77919642	+	Splice_Site	DEL	T	T	-	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	.	NM_001193316	exon4	c.196+1A>-	.	.	.	72.0	27.0	86.0	0.0	.	.	.	.	Atlas-INDEL
PTPN3	5774	hgsc.bcm.edu	hg19	9	112151605	112151606	+	Frame_Shift_Del	DEL	GG	GG	-	novel		TCGA-DD-AAVV-01A-11D-A40R-10	TCGA-DD-AAVV-10A-01D-A40U-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	9d4bac19-b9ce-4a48-8dad-da0dd93ff952	332d7d8c-8386-44c8-8720-3e2ba050cbdf	.	PTPN3	NM_002829	exon22	c.2161_2162del	p.721_721del	.	.	74.0	18.0	73.0	0.0	.	106	.	.	Atlas-INDEL