Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm ZNF436 80818 hgsc.bcm.edu hg19 1 23689096 23689096 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZNF436 NM_001077195 exon4 c.G779A p.S260N CTCCGGCTGAAGC . 87.0 36.0 115.0 0.0 . 49 . . Atlas-SNP ARID1A 8289 hgsc.bcm.edu hg19 1 27106592 27106592 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ARID1A NM_006015 exon20 c.C6203G p.S2068W ACATCTCGGGGCA . 38.0 17.0 32.0 0.0 . 842 . . Atlas-SNP FGR 2268 hgsc.bcm.edu hg19 1 27942229 27942229 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . FGR NM_001042729 exon8 c.G809C p.G270A CCGGTGCCCAGCC . 71.0 20.0 67.0 0.0 . 39 . . Atlas-SNP BAI2 576 hgsc.bcm.edu hg19 1 32207460 32207460 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . BAI2 NM_001703 exon9 c.G1526C p.G509A GGGTAGCCCTGCG . 50.0 16.0 62.0 0.0 . 128 . . Atlas-SNP FASLG 356 hgsc.bcm.edu hg19 1 172633481 172633481 + Silent SNP C C T rs143306673 TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . FASLG NM_000639 exon3 c.C402T p.P134P CCACCCCAGTCCA . 196.0 43.0 121.0 0.0 . 44 . C|1.000;T|0.000 Atlas-SNP CAPN9 10753 hgsc.bcm.edu hg19 1 230914797 230914797 + Missense_Mutation SNP C C A rs200401992 alternate_allele TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . CAPN9 NM_006615 exon9 c.C1032A p.D344E GGAAGACGCGATC . 68.0 27.0 41.0 0.0 . 116 . C|0.999;T|0.001 Atlas-SNP OR2T12 127064 hgsc.bcm.edu hg19 1 248458788 248458788 + Silent SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . OR2T12 NM_001004692 exon1 c.C93A p.A31A AACGGTGGCCAGA . 202.0 51.0 221.0 0.0 . 113 . . Atlas-SNP OR2T12 127064 hgsc.bcm.edu hg19 1 248458789 248458789 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a OR2T12,NS,carcinoma,0,1 OR2T12 NM_001004692 exon1 c.C92T p.A31V ACGGTGGCCAGAA . 202.0 51.0 222.0 0.0 . 113 . . Atlas-SNP CAD 790 hgsc.bcm.edu hg19 2 27460247 27460247 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . CAD NM_004341 exon28 c.G4397T p.G1466V TCCCAGGATTGAT . 43.0 18.0 62.0 0.0 . 199 . . Atlas-SNP SMEK2 57223 hgsc.bcm.edu hg19 2 55825809 55825809 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SMEK2 NM_001122964 exon4 c.G664A p.V222I CCACGACATCCAT . 137.0 46.0 94.0 0.0 . 86 . . Atlas-SNP PCDP1 0 hgsc.bcm.edu hg19 2 120385299 120385299 + Silent SNP G G A rs202085071 bycluster TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . . NM_001271049 exon16 c.G1587A p.S529S TGTGTCGCCCAAG . 134.0 45.0 126.0 0.0 . . . G|0.999;A|0.001 Atlas-SNP XIRP2 129446 hgsc.bcm.edu hg19 2 168098387 168098387 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . XIRP2 NM_001199143 exon9 c.C1242A p.D414E TTCTGACAAAGAG . 57.0 19.0 50.0 0.0 . 914 . . Atlas-SNP XIRP2 129446 hgsc.bcm.edu hg19 2 168106758 168106758 + Silent SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . XIRP2 NM_152381 exon9 c.A8856G p.E2952E ACGTGAAGAACTG . 136.0 37.0 177.0 0.0 . 914 . . Atlas-SNP FSIP2 401024 hgsc.bcm.edu hg19 2 186671281 186671281 + Missense_Mutation SNP G G C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . FSIP2 NM_173651 exon17 c.G17515C p.E5839Q GAAGAGGAAGAGA . 61.0 5.0 70.0 0.0 . 251 . . Atlas-SNP ALS2CR8 79800 hgsc.bcm.edu hg19 2 203834763 203834763 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ALS2CR8 NM_024744 exon11 c.G1075A p.V359I AACTTGGTAGATG . 262.0 60.0 275.0 0.0 . 56 . . Atlas-SNP ZDBF2 57683 hgsc.bcm.edu hg19 2 207174747 207174747 + Nonsense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZDBF2 NM_020923 exon5 c.G5495A p.W1832X AAACATGGTCTCA . 74.0 20.0 96.0 0.0 . 531 . . Atlas-SNP GPBAR1 151306 hgsc.bcm.edu hg19 2 219127715 219127715 + Missense_Mutation SNP T T G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . GPBAR1 NM_170699 exon2 c.T268G p.L90V GTCTACTTGGCTC . 54.0 18.0 70.0 0.0 . 22 . . Atlas-SNP EPHA4 2043 hgsc.bcm.edu hg19 2 222347339 222347339 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EPHA4 NM_004438 exon5 c.C1051A p.P351T TCTGAGGGCTACT . 83.0 31.0 71.0 0.0 . 263 . . Atlas-SNP SPHKAP 80309 hgsc.bcm.edu hg19 2 228855885 228855885 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SPHKAP NM_001142644 exon11 c.C4790T p.P1597L GTAGGCGGTCCAG . 92.0 24.0 100.0 0.0 . 750 . . Atlas-SNP DNER 92737 hgsc.bcm.edu hg19 2 230411752 230411752 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DNER NM_139072 exon5 c.G904A p.V302M CCTTCACCACCAG . 54.0 21.0 34.0 0.0 . 129 . . Atlas-SNP KCNJ13 3769 hgsc.bcm.edu hg19 2 233632998 233632998 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . KCNJ13 NM_002242 exon3 c.T986C p.L329P GAAACCAGAGGAG . 153.0 54.0 193.0 0.0 . 18 . . Atlas-SNP COL6A3 1293 hgsc.bcm.edu hg19 2 238256451 238256451 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . COL6A3 NM_004369 exon31 c.G7028C p.R2343T CTTACCCTTCGGC . 43.0 10.0 55.0 0.0 . 608 . . Atlas-SNP CTNNB1 1499 hgsc.bcm.edu hg19 3 41266097 41266097 + Missense_Mutation SNP G G A rs28931588 bycluster TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a CTNNB1,gallbladder,other,0,2 CTNNB1 NM_001098209 exon3 c.G94A p.D32N TACCTGGACTCTG . 124.0 37.0 147.0 0.0 . 4904 . . Atlas-SNP GSK3B 2932 hgsc.bcm.edu hg19 3 119631579 119631579 + Missense_Mutation SNP A A C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . GSK3B NM_002093 exon6 c.T687G p.F229L GGCTCCAAAGATC . 85.0 21.0 66.0 0.0 . 119 . . Atlas-SNP PCDH7 5099 hgsc.bcm.edu hg19 4 30724818 30724818 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PCDH7 NM_032457 exon1 c.C1774A p.L592M GACATCCTGGTCA . 38.0 11.0 54.0 0.0 . 215 . . Atlas-SNP DCAF4L1 285429 hgsc.bcm.edu hg19 4 41984023 41984023 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a DCAF4L1,colon,carcinoma,0,1 DCAF4L1 NM_001029955 exon1 c.G214T p.D72Y GCGAGCGACCGAT . 96.0 4.0 107.0 0.0 . 70 . . Atlas-SNP KIAA1109 84162 hgsc.bcm.edu hg19 4 123267816 123267816 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . KIAA1109 NM_015312 exon73 c.A12772G p.M4258V TATGATATGCGCC . 63.0 21.0 52.0 0.0 . 424 . . Atlas-SNP SLC1A3 6507 hgsc.bcm.edu hg19 5 36686198 36686198 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SLC1A3 NM_004172 exon10 c.G1456A p.G486R GTACTGGGAGACT . 81.0 6.0 89.0 0.0 . 88 . . Atlas-SNP EPB41L4A 64097 hgsc.bcm.edu hg19 5 111600696 111600696 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EPB41L4A NM_022140 exon6 c.G451T p.D151Y ATGGGTCATAATC . 78.0 17.0 86.0 0.0 . 130 . . Atlas-SNP ACSL6 23305 hgsc.bcm.edu hg19 5 131324528 131324528 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ACSL6 NM_001009185 exon6 c.C622T p.P208S CCCCAGGGCCCAG . 35.0 10.0 42.0 0.0 . 169 . . Atlas-SNP SPOCK1 6695 hgsc.bcm.edu hg19 5 136314459 136314459 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SPOCK1 NM_004598 exon11 c.C1204T p.R402W GCTCCCGTTCATA . 139.0 30.0 143.0 0.0 . 58 . . Atlas-SNP PCDHA1 56147 hgsc.bcm.edu hg19 5 140167891 140167891 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a PCDHA1_ENST00000504120,NS,carcinoma,0,2 PCDHA1 NM_031410 exon1 c.C2016T p.S672S GGAGAGCGGCCAG . 57.0 12.0 51.0 0.0 . 387 . . Atlas-SNP EBF1 1879 hgsc.bcm.edu hg19 5 158158108 158158108 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EBF1 NM_024007 exon11 c.G1094C p.R365P GGGTGCCGAGGAA . 34.0 8.0 29.0 0.0 . 110 . . Atlas-SNP NPM1 4869 hgsc.bcm.edu hg19 5 170837534 170837534 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . NPM1 NM_002520 exon11 c.A850G p.I284V CAGGCTATTCAAG . 28.0 9.0 29.0 0.0 . 5003 . . Atlas-SNP TRIM26 7726 hgsc.bcm.edu hg19 6 30156977 30156977 + Splice_Site SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TRIM26 NM_003449 exon10 c.905-1G>T . GCTTCCCTGGGGA . 30.0 7.0 39.0 0.0 . 74 . . Atlas-SNP DNAH8 1769 hgsc.bcm.edu hg19 6 38795995 38795995 + Silent SNP A A G rs368262519 TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DNAH8 NM_001206927 exon30 c.A4119G p.E1373E AGTTGAAGTAACC . 55.0 13.0 44.0 0.0 . 1239 . . Atlas-SNP TREM1 54210 hgsc.bcm.edu hg19 6 41250178 41250178 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TREM1 NM_001242590 exon2 c.G361C p.E121Q GAGGCTCCTTGGG . 84.0 22.0 95.0 0.0 . 38 . . Atlas-SNP COL9A1 1297 hgsc.bcm.edu hg19 6 71009833 71009833 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . COL9A1 NM_001851 exon4 c.G212A p.R71K GCTCTTCTAGATG . 144.0 51.0 129.0 0.0 . 228 . . Atlas-SNP EEF1A1 1915 hgsc.bcm.edu hg19 6 74227627 74227627 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EEF1A1 NM_001402 exon8 c.C1295T p.T432I GCAACTGTCTGTC . 96.0 28.0 106.0 0.0 . 56 . . Atlas-SNP EEF1A1 1915 hgsc.bcm.edu hg19 6 74227628 74227628 + Missense_Mutation SNP T T A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EEF1A1 NM_001402 exon8 c.A1294T p.T432S CAACTGTCTGTCT . 96.0 29.0 106.0 0.0 . 56 . . Atlas-SNP MDN1 23195 hgsc.bcm.edu hg19 6 90452952 90452952 + Silent SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . MDN1 NM_014611 exon31 c.G4365C p.L1455L CTGAACCAGAGGC . 129.0 38.0 123.0 0.0 . 478 . . Atlas-SNP IGF2R 3482 hgsc.bcm.edu hg19 6 160454117 160454117 + Silent SNP A A C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . IGF2R NM_000876 exon9 c.A1189C p.R397R GCAGGAAGATACC . 27.0 16.0 48.0 0.0 . 251 . . Atlas-SNP OSBPL3 26031 hgsc.bcm.edu hg19 7 24904971 24904971 + Missense_Mutation SNP T T G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . OSBPL3 NM_145321 exon7 c.A663C p.K221N GGAGCATTTTTCC . 106.0 21.0 118.0 0.0 . 100 . . Atlas-SNP STEAP4 79689 hgsc.bcm.edu hg19 7 87910335 87910335 + Silent SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . STEAP4 NM_001205315 exon5 c.T1044C p.Y348Y AGCCACATATGAA . 112.0 30.0 97.0 0.0 . 54 . . Atlas-SNP MLL3 58508 hgsc.bcm.edu hg19 7 151878921 151878921 + Silent SNP A A T rs369706450 TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . MLL3 NM_170606 exon36 c.T6024A p.T2008T TGGTTTAGTAAAG . 92.0 35.0 75.0 0.0 . 1564 . . Atlas-SNP MLL3 58508 hgsc.bcm.edu hg19 7 151878922 151878922 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . MLL3 NM_170606 exon36 c.C6023T p.T2008I GGTTTAGTAAAGT . 90.0 35.0 76.0 0.0 . 1564 . . Atlas-SNP ZBTB10 65986 hgsc.bcm.edu hg19 8 81412438 81412438 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZBTB10 NM_023929 exon2 c.A1682G p.N561S TTTGGAATAATAT . 121.0 55.0 110.0 0.0 . 51 . . Atlas-SNP LRRC6 23639 hgsc.bcm.edu hg19 8 133634904 133634904 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . LRRC6 NM_012472 exon7 c.G867A p.R289R CAAAGTCCTGGGT . 236.0 61.0 162.0 0.0 . 58 . . Atlas-SNP PTK2 5747 hgsc.bcm.edu hg19 8 141756887 141756887 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PTK2 NM_005607 exon18 c.T1556C p.I519T ATGATTATCCAGA . 84.0 9.0 64.0 0.0 . 311 . . Atlas-SNP MELK 9833 hgsc.bcm.edu hg19 9 36630339 36630339 + Missense_Mutation SNP T T G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . MELK NM_014791 exon9 c.T710G p.I237S GTAGCATTCTGCT . 61.0 20.0 59.0 0.0 . 74 . . Atlas-SNP SYK 6850 hgsc.bcm.edu hg19 9 93650155 93650155 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a SYK_ENST00000375754,NS,carcinoma,0,2 SYK NM_003177 exon12 c.G1706T p.G569V CCTATGGGCAGAA . 107.0 8.0 118.0 0.0 . 132 . . Atlas-SNP NCBP1 4686 hgsc.bcm.edu hg19 9 100425320 100425320 + Missense_Mutation SNP C C G rs200307901 by1000genomes;alternate_allele TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . NCBP1 NM_002486 exon18 c.C1788G p.N596K GAGGAACCATCCA . 65.0 14.0 89.0 0.0 . 64 . C|1.000;A|0.000 Atlas-SNP LAMC3 10319 hgsc.bcm.edu hg19 9 133914252 133914252 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . LAMC3 NM_006059 exon5 c.C978T p.P326P CATAGCCTGCAAC . 25.0 11.0 24.0 0.0 . 167 . . Atlas-SNP OLFM1 10439 hgsc.bcm.edu hg19 9 138011380 138011380 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . OLFM1 NM_014279 exon6 c.C760T p.R254C AACAACCGCTTCG . 42.0 11.0 71.0 0.0 . 57 . . Atlas-SNP UBAC1 10422 hgsc.bcm.edu hg19 9 138837090 138837090 + Silent SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . UBAC1 NM_016172 exon7 c.G660T p.S220S AGGCACCGACATG . 39.0 17.0 31.0 0.0 . 40 . . Atlas-SNP CCAR1 55749 hgsc.bcm.edu hg19 10 70507323 70507323 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . CCAR1 NM_018237 exon8 c.G826A p.A276T CAAAAAGGTATCT . 44.0 7.0 60.0 0.0 . 118 . . Atlas-SNP DUSP13 51207 hgsc.bcm.edu hg19 10 76865548 76865548 + Missense_Mutation SNP C C T rs200574063 bycluster TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DUSP13 NM_001007271 exon3 c.G446A p.R149Q GACAGCCGCTGGT . 52.0 25.0 50.0 0.0 . 82 . . Atlas-SNP SLC1A2 6506 hgsc.bcm.edu hg19 11 35308464 35308464 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SLC1A2 NM_004171 exon8 c.G1126C p.E376Q TTTCTTCCAGGCA . 60.0 24.0 61.0 0.0 . 54 . . Atlas-SNP OR5D18 219438 hgsc.bcm.edu hg19 11 55587559 55587559 + Missense_Mutation SNP T T A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . OR5D18 NM_001001952 exon1 c.T454A p.W152R TATGCCTGGGGAG . 177.0 58.0 206.0 0.0 . 121 . . Atlas-SNP GAL 51083 hgsc.bcm.edu hg19 11 68455540 68455540 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . GAL NM_015973 exon4 c.G195A p.E65E GCGGGAGCTGCGG . 67.0 24.0 62.0 0.0 . 11 . . Atlas-SNP GPR84 53831 hgsc.bcm.edu hg19 12 54757494 54757494 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . GPR84 NM_020370 exon2 c.C142A p.Q48K TGGGCTGGATGGC . 50.0 14.0 55.0 0.0 . 38 . . Atlas-SNP MON2 23041 hgsc.bcm.edu hg19 12 62979151 62979151 + Missense_Mutation SNP A A T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . MON2 NM_015026 exon33 c.A4777T p.N1593Y TTCAGTAATAAAG . 148.0 47.0 162.0 0.0 . 160 . . Atlas-SNP EEA1 8411 hgsc.bcm.edu hg19 12 93236314 93236314 + Missense_Mutation SNP T T A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EEA1 NM_003566 exon10 c.A842T p.Q281L ACTTCCTGGGGGC . 345.0 99.0 230.0 0.0 . 104 . . Atlas-SNP DAO 1610 hgsc.bcm.edu hg19 12 109283278 109283278 + Missense_Mutation SNP C C T rs201583577 bycluster TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DAO NM_001917 exon4 c.C343T p.R115W GGATTTCGGAAGC . 49.0 9.0 48.0 0.0 . 58 . . Atlas-SNP SUPT20H 55578 hgsc.bcm.edu hg19 13 37605935 37605935 + Missense_Mutation SNP T T C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . . NM_017569 exon11 c.A808G p.K270E TTCTTTTTTGTAA . 218.0 63.0 179.0 0.0 . . . . Atlas-SNP DOCK9 23348 hgsc.bcm.edu hg19 13 99533811 99533811 + Splice_Site SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DOCK9 NM_015296 exon26 c.2748+1G>A . TACATACCTTAAC . 52.0 15.0 53.0 0.0 . 311 . . Atlas-SNP ANKRD10 55608 hgsc.bcm.edu hg19 13 111532383 111532383 + Silent SNP G G C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ANKRD10 NM_017664 exon6 c.C864G p.S288S GGTCGTGGAGGGG . 64.0 22.0 82.0 0.0 . 24 . . Atlas-SNP PSMB5 5693 hgsc.bcm.edu hg19 14 23495455 23495455 + Missense_Mutation SNP T T C rs60224002 TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PSMB5 NM_002797 exon3 c.A635G p.Y212C AGATCATAGGCCT . 60.0 14.0 79.0 0.0 . 31 . T|0.998;C|0.002 Atlas-SNP CHURC1 91612 hgsc.bcm.edu hg19 14 65398907 65398907 + Missense_Mutation SNP A A G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . CHURC1 NM_145165 exon4 c.A382G p.I128V ATCAGTATTCTCC . 115.0 35.0 101.0 0.0 . 6 . . Atlas-SNP NPAP1 23742 hgsc.bcm.edu hg19 15 24923800 24923800 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . . NM_018958 exon1 c.C2786A p.T929K GCTTAACATCTCC . 35.0 8.0 33.0 0.0 . . . . Atlas-SNP SPTBN5 51332 hgsc.bcm.edu hg19 15 42178394 42178394 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SPTBN5 NM_016642 exon7 c.C954T p.T318T CTCCTGGGTGCGG . 69.0 19.0 60.0 0.0 . 171 . . Atlas-SNP PLA2G4E 123745 hgsc.bcm.edu hg19 15 42280320 42280320 + Silent SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PLA2G4E NM_001206670 exon16 c.G1758T p.L586L GGCATCCAGCAGG . 32.0 14.0 41.0 0.0 . 60 . . Atlas-SNP SEMA6D 80031 hgsc.bcm.edu hg19 15 48060868 48060868 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SEMA6D NM_153618 exon18 c.C1856A p.T619K AACTGACAAGCTC . 61.0 15.0 62.0 0.0 . 322 . . Atlas-SNP BNC1 646 hgsc.bcm.edu hg19 15 83932654 83932654 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . BNC1 NM_001717 exon4 c.G1349A p.C450Y GGCCTACAGTCTG . 103.0 28.0 120.0 0.0 . 149 . . Atlas-SNP PDE8A 5151 hgsc.bcm.edu hg19 15 85664189 85664189 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PDE8A NM_002605 exon18 c.G1896A p.L632L GGCCTTGGCCTTC . 68.0 28.0 60.0 0.0 . 50 . . Atlas-SNP C16orf13 84326 hgsc.bcm.edu hg19 16 684899 684899 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . C16orf13 NM_032366 exon4 c.C478T p.L160F ATCTGAGCATCAG . 21.0 9.0 23.0 0.0 . 11 . . Atlas-SNP WDR90 197335 hgsc.bcm.edu hg19 16 709346 709346 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . WDR90 NM_145294 exon26 c.G3154A p.V1052I CTGGGCGTCTGTG . 50.0 13.0 92.0 0.0 . 107 . . Atlas-SNP TPSD1 23430 hgsc.bcm.edu hg19 16 1306673 1306673 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a TPSD1,NS,carcinoma,0,1 TPSD1 NM_012217 exon2 c.C239T p.A80V CCGCGGCGCACTG . 67.0 22.0 65.0 0.0 . 47 . . Atlas-SNP EME2 197342 hgsc.bcm.edu hg19 16 1826218 1826218 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . EME2 NM_001257370 exon8 c.C1119T p.L373L TGATCTCCTGCTG . 39.0 14.0 35.0 0.0 . 40 . . Atlas-SNP TIGD7 91151 hgsc.bcm.edu hg19 16 3350103 3350103 + Missense_Mutation SNP A A T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TIGD7 NM_033208 exon2 c.T512A p.L171Q TGAGCTAGACACA . 157.0 54.0 136.0 0.0 . 41 . . Atlas-SNP NLRC3 197358 hgsc.bcm.edu hg19 16 3613898 3613898 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . NLRC3 NM_178844 exon5 c.C1040A p.T347K GGCCCCGTCCTGC . 17.0 7.0 13.0 0.0 . 103 . . Atlas-SNP RBFOX1 54715 hgsc.bcm.edu hg19 16 7760685 7760685 + Missense_Mutation SNP G G T rs369122393 alternate_allele TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . RBFOX1 NM_145891 exon13 c.G1195T p.V399F GGTCTCGTTCTTT . 112.0 27.0 116.0 0.0 . 341 . . Atlas-SNP ZNF267 10308 hgsc.bcm.edu hg19 16 31927163 31927163 + Missense_Mutation SNP T T G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZNF267 NM_003414 exon4 c.T1593G p.C531W TACTTGTTTCTCA . 56.0 14.0 52.0 0.0 . 94 . . Atlas-SNP GPR97 222487 hgsc.bcm.edu hg19 16 57717987 57717987 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . GPR97 NM_170776 exon9 c.G1025T p.G342V CCCGGGGGGCTGT . 66.0 19.0 57.0 0.0 . 74 . . Atlas-SNP FANCA 2175 hgsc.bcm.edu hg19 16 89813065 89813065 + Missense_Mutation SNP T T A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . FANCA NM_000135 exon35 c.A3440T p.D1147V GAGGGGTCTCTGC . 31.0 7.0 39.0 0.0 . 99 . . Atlas-SNP DVL2 1856 hgsc.bcm.edu hg19 17 7137468 7137468 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DVL2 NM_004422 exon1 c.C114T p.I38I GAGGGTGATGCGC . 38.0 12.0 78.0 0.0 . 49 . . Atlas-SNP TP53 7157 hgsc.bcm.edu hg19 17 7579591 7579591 + Splice_Site SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a TP53_ENST00000413465,NS,carcinoma,0,31 TP53 NM_000546 exon5 c.97-1G>A . GGGGGACTGTAGA . 30.0 9.0 30.0 0.0 . 33396 . . Atlas-SNP UNC45B 146862 hgsc.bcm.edu hg19 17 33495177 33495177 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . UNC45B NM_001267052 exon10 c.C1249G p.L417V CAGCTGCTGGGAC . 82.0 29.0 86.0 0.0 . 133 . . Atlas-SNP KLHL11 55175 hgsc.bcm.edu hg19 17 40010438 40010438 + Missense_Mutation SNP T T C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . KLHL11 NM_018143 exon2 c.A1681G p.T561A ATGCTGTCTGATA . 55.0 16.0 67.0 0.0 . 44 . . Atlas-SNP TMUB2 79089 hgsc.bcm.edu hg19 17 42266396 42266396 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TMUB2 NM_001076674 exon3 c.C42T p.D14D CGTGGACCCTGCC . 79.0 20.0 60.0 0.0 . 29 . . Atlas-SNP TTLL6 284076 hgsc.bcm.edu hg19 17 46878909 46878909 + Missense_Mutation SNP A A T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TTLL6 NM_001130918 exon4 c.T458A p.V153E TCCATCACCCGCT . 68.0 29.0 96.0 0.0 . 113 . . Atlas-SNP UBE2Z 65264 hgsc.bcm.edu hg19 17 46988176 46988176 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . . NM_023079 exon2 c.C324T p.I108I GGATATCATGTCC . 78.0 20.0 67.0 0.0 . . . . Atlas-SNP TTYH2 94015 hgsc.bcm.edu hg19 17 72233606 72233606 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TTYH2 NM_032646 exon4 c.G588T p.M196I CACCATGGAGCTG . 36.0 12.0 41.0 0.0 . 63 . . Atlas-SNP ITGB4 3691 hgsc.bcm.edu hg19 17 73727379 73727379 + Missense_Mutation SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a ITGB4,colon,carcinoma,0,1 ITGB4 NM_001005731 exon10 c.G1145A p.R382Q GCCTTCGGACAGA . 37.0 14.0 37.0 0.0 . 165 . . Atlas-SNP QRICH2 84074 hgsc.bcm.edu hg19 17 74290071 74290071 + Missense_Mutation SNP T T A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . QRICH2 NM_032134 exon4 c.A239T p.H80L CCTCCGTGCTTAG . 29.0 12.0 42.0 0.0 . 143 . . Atlas-SNP DNAH17 8632 hgsc.bcm.edu hg19 17 76433836 76433836 + Missense_Mutation SNP G G T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . DNAH17 NM_173628 exon74 c.C11920A p.P3974T TCTCGGGGCTGGG . 47.0 16.0 42.0 0.0 . 347 . . Atlas-SNP ANKRD30B 374860 hgsc.bcm.edu hg19 18 14764069 14764069 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ANKRD30B NM_001145029 exon7 c.C1205A p.S402Y AAACATCTACAAA . 35.0 13.0 43.0 0.0 . 237 . . Atlas-SNP CHST9 83539 hgsc.bcm.edu hg19 18 24496571 24496571 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a CHST9_ENST00000284224,NS,carcinoma,0,2 CHST9 NM_031422 exon6 c.C984T p.V328V GAACTTGACTCCA . 105.0 23.0 146.0 0.0 . 114 . . Atlas-SNP TCEB3B 51224 hgsc.bcm.edu hg19 18 44560133 44560133 + Silent SNP A A T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . TCEB3B NM_016427 exon1 c.T1503A p.A501A GAAAGCAGCTTCC . 60.0 14.0 52.0 0.0 . 141 . . Atlas-SNP CCDC11 220136 hgsc.bcm.edu hg19 18 47788414 47788414 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . CCDC11 NM_145020 exon2 c.G245T p.R82I TTGATTCTTGCTC . 122.0 45.0 148.0 0.0 . 59 . . Atlas-SNP C2CD4C 126567 hgsc.bcm.edu hg19 19 408161 408161 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . C2CD4C NM_001136263 exon2 c.C201T p.A67A CAGCGCGGCCTGT . 61.0 19.0 62.0 0.0 . 13 . . Atlas-SNP ECSIT 51295 hgsc.bcm.edu hg19 19 11624014 11624014 + Missense_Mutation SNP G G A rs373672064 TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ECSIT NM_001142464 exon4 c.C595T p.R199C TCAGGCGCACCAA . 48.0 16.0 35.0 0.0 . 32 . . Atlas-SNP ZNF28 7576 hgsc.bcm.edu hg19 19 53304474 53304474 + Silent SNP T T A rs372999948 alternate_allele TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZNF28 NM_006969 exon4 c.A624T p.V208V CATGTGTACATTC . 66.0 22.0 64.0 0.0 . 191 . . Atlas-SNP ZNF415 55786 hgsc.bcm.edu hg19 19 53612425 53612425 + Silent SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZNF415 NM_018355 exon4 c.G873A p.R291R AACTCTCCGATGT . 65.0 19.0 58.0 0.0 . 68 . . Atlas-SNP POLR3F 10621 hgsc.bcm.edu hg19 20 18464200 18464200 + Missense_Mutation SNP T T C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . POLR3F NM_006466 exon9 c.T949C p.X317Q GAATTTTAATAGA . 36.0 8.0 36.0 0.0 . 14 . . Atlas-SNP ZNF335 63925 hgsc.bcm.edu hg19 20 44592256 44592256 + Missense_Mutation SNP C C A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZNF335 NM_022095 exon9 c.G1389T p.R463S GAAGGGCCTCAAA . 58.0 18.0 78.0 0.0 . 115 . . Atlas-SNP PRAME 23532 hgsc.bcm.edu hg19 22 22892516 22892516 + Silent SNP G G A novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PRAME NM_206954 exon5 c.C585T p.L195L CTCAATGAGGTAG . 70.0 18.0 57.0 0.0 . 78 . . Atlas-SNP ACOT9 23597 hgsc.bcm.edu hg19 X 23731290 23731290 + Silent SNP T T C novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ACOT9 NM_001037171 exon9 c.A624G p.A208A AAATGTTGCATCC . 189.0 131.0 145.0 0.0 . 33 . . Atlas-SNP AMER1 139285 hgsc.bcm.edu hg19 X 63410478 63410478 + Missense_Mutation SNP C C T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . . NM_152424 exon2 c.G2689A p.D897N CAGTGTCGAGAGA . 72.0 44.0 64.0 0.0 . . . . Atlas-SNP AFF2 2334 hgsc.bcm.edu hg19 X 148037267 148037267 + Missense_Mutation SNP A A T novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . AFF2 NM_002025 exon11 c.A1692T p.Q564H CATCCAACCAATG . 71.0 37.0 58.0 0.0 . 679 . . Atlas-SNP PASD1 139135 hgsc.bcm.edu hg19 X 150842573 150842573 + Missense_Mutation SNP C C G novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . PASD1 NM_173493 exon15 c.C2090G p.S697C AGTTGTCTGATTC . 47.0 29.0 69.0 0.0 . 286 . . Atlas-SNP SREBF1 6720 hgsc.bcm.edu hg19 17 17721042 17721042 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SREBF1 NM_001005291 exon8 c.1463delA p.E488fs . . 28.0 12.0 52.0 0.0 . 47 . . Atlas-INDEL C3 718 hgsc.bcm.edu hg19 19 6681964 6681966 + In_Frame_Del DEL GAT GAT - novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 GAT GAT . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a C3,NS,carcinoma,0,1 C3 NM_000064 exon35 c.4337_4339del p.1446_1447del . . 50.0 15.0 66.0 0.0 . 192 . . Atlas-Indel,Pindel HCFC2 29915 hgsc.bcm.edu hg19 12 104474603 104474604 + Frame_Shift_Del DEL AA AA - novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 AA AA . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . HCFC2 NM_013320 exon5 c.761_762del p.254_254del . . 94.0 33.0 99.0 0.0 . 94 . . Atlas-Indel,Pindel ZFC3H1 196441 hgsc.bcm.edu hg19 12 72030765 72030766 + Frame_Shift_Ins INS - - ATTA novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . ZFC3H1 NM_144982 exon8 c.1800_1801insTAAT p.P600fs . . 141.0 23.0 91.0 0.0 . 172 . . Atlas-Indel,Pindel SLC44A3 126969 hgsc.bcm.edu hg19 1 95357851 95357859 + In_Frame_Del DEL TTTCACTGT TTTCACTGT - novel TCGA-UB-A7MD-01A-12D-A34Z-10 TCGA-UB-A7MD-10A-01D-A34Z-10 TTTCACTGT TTTCACTGT . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq d48970c7-b709-4f1b-99d3-3a4d1654738b d3214cb5-374d-4e2f-b712-07dfcb82966a . SLC44A3 NM_001114106 exon14 c.1634_1642del p.545_548del . . 231.0 49.0 327.0 0.0 . 109 . . Atlas-Indel,Pindel