Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
EXOC2	55770	genome.wustl.edu	36	6	578067	578067	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	578067	578067	EXOC2	6	C	C	A	25
GAK	2580	genome.wustl.edu	36	4	835686	835686	+	Missense_Mutation	SNP	C	G	G	rs55801437	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	G	G	G	G	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	835686	835686	GAK	4	C	G	G	32
TPO	7173	genome.wustl.edu	36	2	1470757	1470757	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1470757	1470757	TPO	2	C	C	A	18
RNPS1	10921	genome.wustl.edu	36	16	2252307	2252307	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	2252307	2252307	RNPS1	16	C	C	T	31
NAP1L4	4676	genome.wustl.edu	36	11	2937577	2937577	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	2937577	2937577	NAP1L4	11	C	C	T	23
CSMD1	64478	genome.wustl.edu	36	8	3204122	3204122	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	3204122	3204122	CSMD1	8	C	C	T	22
C11orf42	160298	genome.wustl.edu	36	11	6188395	6188395	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6188395	6188395	C11orf42	11	C	C	A	22
TP53	7157	genome.wustl.edu	36	17	7518929	7518929	+	Missense_Mutation	SNP	A	T	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	T	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7518929	7518929	TP53	17	A	T	T	6
PZP	5858	genome.wustl.edu	36	12	9246536	9246536	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9246536	9246536	PZP	12	G	G	C	33
PAK7	57144	genome.wustl.edu	36	20	9494755	9494755	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9494755	9494755	PAK7	20	G	G	C	46
USP43	124739	genome.wustl.edu	36	17	9572024	9572024	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	9572024	9572024	USP43	17	G	G	T	43
MYH8	4626	genome.wustl.edu	36	17	10244771	10244771	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	10244771	10244771	MYH8	17	T	T	A	54
MYH4	4622	genome.wustl.edu	36	17	10304029	10304029	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10304029	10304029	MYH4	17	C	C	G	23
RGL3	57139	genome.wustl.edu	36	19	11388320	11388320	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	11388320	11388320	RGL3	19	C	C	T	23
BTBD3	22903	genome.wustl.edu	36	20	11851398	11851398	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11851398	11851398	BTBD3	20	C	C	G	18
MFN2	9927	genome.wustl.edu	36	1	11988549	11988549	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11988549	11988549	MFN2	1	C	C	T	31
FREM1	158326	genome.wustl.edu	36	9	14838670	14838670	+	Missense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14838670	14838670	FREM1	9	C	A	A	30
CUBN	8029	genome.wustl.edu	36	10	17022062	17022062	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	17022062	17022062	CUBN	10	C	C	A	23
TBX1	6899	genome.wustl.edu	36	22	18131755	18131755	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18131755	18131755	TBX1	22	C	C	T	23
FKBP8	23770	genome.wustl.edu	36	19	18510133	18510133	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18510133	18510133	FKBP8	19	G	G	C	42
HERC2P2	400322	genome.wustl.edu	36	15	18904833	18904833	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	T	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	18904833	18904833	HERC2P2	15	C	C	T	17
PLEKHA5	54477	genome.wustl.edu	36	12	19414000	19414000	+	Splice_Site_SNP	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	19414000	19414000	PLEKHA5	12	G	G	C	36
NCAM2	4685	genome.wustl.edu	36	21	21632585	21632585	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21632585	21632585	NCAM2	21	C	C	T	26
GGT5	2687	genome.wustl.edu	36	22	22945945	22945945	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	22945945	22945945	GGT5	22	C	C	A	26
SOX5	6660	genome.wustl.edu	36	12	23578429	23578429	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23578429	23578429	SOX5	12	T	T	A	56
CPNE6	9362	genome.wustl.edu	36	14	23616333	23616333	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23616333	23616333	CPNE6	14	C	C	G	32
MTMR6	9107	genome.wustl.edu	36	13	24729942	24729942	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24729942	24729942	MTMR6	13	C	C	T	23
HIST1H2BG	8339	genome.wustl.edu	36	6	26324802	26324802	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26324802	26324802	HIST1H2BG	6	T	T	C	62
APP	351	genome.wustl.edu	36	21	26406308	26406308	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	26406308	26406308	APP	21	C	C	A	25
SYTL1	84958	genome.wustl.edu	36	1	27549949	27549949	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27549949	27549949	SYTL1	1	C	C	A	17
EYA3	2140	genome.wustl.edu	36	1	28234668	28234668	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	28234668	28234668	EYA3	1	G	G	T	44
ZNF323	64288	genome.wustl.edu	36	6	28402343	28402343	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	28402343	28402343	ZNF323	6	T	T	A	49
TPX2	22974	genome.wustl.edu	36	20	29821902	29821902	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29821902	29821902	TPX2	20	T	T	C	50
CLDN17	26285	genome.wustl.edu	36	21	30460663	30460663	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30460663	30460663	CLDN17	21	T	T	A	56
RNASEN	29102	genome.wustl.edu	36	5	31485177	31485177	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	31485177	31485177	RNASEN	5	C	C	G	32
GOLPH3	64083	genome.wustl.edu	36	5	32162087	32162087	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	32162087	32162087	GOLPH3	5	C	C	T	19
NOTCH4	4855	genome.wustl.edu	36	6	32298323	32298323	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32298323	32298323	NOTCH4	6	G	G	A	39
BAG1	573	genome.wustl.edu	36	9	33245264	33245264	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	33245264	33245264	BAG1	9	G	G	A	47
RING1	6015	genome.wustl.edu	36	6	33285759	33285759	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	33285759	33285759	RING1	6	T	T	G	50
KRT25	147183	genome.wustl.edu	36	17	36163715	36163715	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36163715	36163715	KRT25	17	G	G	T	35
SKP2	6502	genome.wustl.edu	36	5	36216135	36216135	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36216135	36216135	SKP2	5	G	G	A	47
DNALI1	7802	genome.wustl.edu	36	1	37799838	37799838	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37799838	37799838	DNALI1	1	A	A	G	14
GOT1L1	137362	genome.wustl.edu	36	8	37912392	37912392	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37912392	37912392	GOT1L1	8	A	A	G	7
TLR1	7096	genome.wustl.edu	36	4	38475422	38475422	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38475422	38475422	TLR1	4	C	C	T	25
SLC2A13	114134	genome.wustl.edu	36	12	38510252	38510252	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	38510252	38510252	SLC2A13	12	G	G	T	48
SEC23A	10484	genome.wustl.edu	36	14	38581817	38581817	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38581817	38581817	SEC23A	14	A	A	G	3
SPINT1	6692	genome.wustl.edu	36	15	38933038	38933038	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38933038	38933038	SPINT1	15	G	G	C	34
PLA2G4D	283748	genome.wustl.edu	36	15	40150687	40150687	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	T	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40150687	40150687	PLA2G4D	15	C	C	T	27
MYEF2	50804	genome.wustl.edu	36	15	46245454	46245454	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	46245454	46245454	MYEF2	15	C	C	G	29
RNF114	55905	genome.wustl.edu	36	20	47991590	47991590	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	47991590	47991590	RNF114	20	C	C	T	23
PHLDB3	653583	genome.wustl.edu	36	19	48682628	48682628	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	48682628	48682628	PHLDB3	19	C	C	T	23
TRIM13	10206	genome.wustl.edu	36	13	49484660	49484660	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	49484660	49484660	TRIM13	13	C	C	T	29
LOC340602	340602	genome.wustl.edu	36	X	51168014	51168014	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51168014	51168014	LOC340602	23	T	T	C	56
CCPG1	9236	genome.wustl.edu	36	15	53439566	53439566	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53439566	53439566	CCPG1	15	A	A	G	1
NEUROD4	58158	genome.wustl.edu	36	12	53707449	53707449	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53707449	53707449	NEUROD4	12	G	G	T	44
CES1	1066	genome.wustl.edu	36	16	54415073	54415073	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	54415073	54415073	CES1	16	C	C	A	22
BSND	7809	genome.wustl.edu	36	1	55245270	55245270	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55245270	55245270	BSND	1	G	G	A	34
CCDC88A	55704	genome.wustl.edu	36	2	55389610	55389610	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55389610	55389610	CCDC88A	2	T	T	C	50
BNIP2	663	genome.wustl.edu	36	15	57752127	57752127	+	Splice_Site_SNP	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	57752127	57752127	BNIP2	15	C	C	A	20
FGGY	55277	genome.wustl.edu	36	1	60000837	60000837	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	60000837	60000837	FGGY	1	A	A	G	12
CHD7	55636	genome.wustl.edu	36	8	61905599	61905599	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	61905599	61905599	CHD7	8	T	T	G	64
CCT4	10575	genome.wustl.edu	36	2	61953162	61953162	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	61953162	61953162	CCT4	2	C	C	T	29
AURKC	6795	genome.wustl.edu	36	19	62438448	62438448	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62438448	62438448	AURKC	19	T	T	G	50
LOC100128295		genome.wustl.edu	36	10	64857743	64857743	+	Silent	SNP	C	T	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	T	T	T	T	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	64857743	64857743	LOC100128295	10	C	T	T	22
ZFP90	146198	genome.wustl.edu	36	16	67155003	67155003	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67155003	67155003	ZFP90	16	A	A	T	11
LOC387867	387867	genome.wustl.edu	36	12	67233142	67233142	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67233142	67233142	LOC387867	12	G	G	T	35
DNAI2	64446	genome.wustl.edu	36	17	69797457	69797457	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	69797457	69797457	DNAI2	17	C	C	T	17
RNF213	57674	genome.wustl.edu	36	17	75932281	75932281	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75932281	75932281	RNF213	17	C	C	G	29
PTGFR	5737	genome.wustl.edu	36	1	78774697	78774697	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	78774697	78774697	PTGFR	1	G	G	T	47
SEL1L	6400	genome.wustl.edu	36	14	81034573	81034573	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	81034573	81034573	SEL1L	14	C	C	T	21
HPSE	10855	genome.wustl.edu	36	4	84450939	84450939	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	84450939	84450939	HPSE	4	C	C	T	17
GRM3	2913	genome.wustl.edu	36	7	86306252	86306252	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	86306252	86306252	GRM3	7	T	T	A	54
UNC45A	55898	genome.wustl.edu	36	15	89290898	89290898	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	89290898	89290898	UNC45A	15	C	C	T	19
CRADD	8738	genome.wustl.edu	36	12	92596747	92596747	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	92596747	92596747	CRADD	12	G	G	T	47
HEPHL1	341208	genome.wustl.edu	36	11	93394202	93394202	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	93394202	93394202	HEPHL1	11	C	C	T	28
BCAR3	8412	genome.wustl.edu	36	1	93827462	93827462	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	93827462	93827462	BCAR3	1	G	G	C	45
PLEKHF2	79666	genome.wustl.edu	36	8	96235865	96235865	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	96235865	96235865	PLEKHF2	8	G	G	T	33
CYP2C18	1562	genome.wustl.edu	36	10	96437584	96437584	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	96437584	96437584	CYP2C18	10	G	G	T	41
REV1	51455	genome.wustl.edu	36	2	99421715	99421715	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	99421715	99421715	REV1	2	C	C	T	19
OR5K2	402135	genome.wustl.edu	36	3	99699836	99699836	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	99699836	99699836	OR5K2	3	G	G	A	36
NALCN	259232	genome.wustl.edu	36	13	100515868	100515868	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100515868	100515868	NALCN	13	C	C	T	19
TBC1D8	11138	genome.wustl.edu	36	2	101021355	101021355	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101021355	101021355	TBC1D8	2	C	C	A	21
BLOC1S2	282991	genome.wustl.edu	36	10	102035928	102035928	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102035928	102035928	BLOC1S2	10	T	T	C	64
MMP8	4317	genome.wustl.edu	36	11	102098605	102098605	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102098605	102098605	MMP8	11	C	C	T	30
IL1F7	27178	genome.wustl.edu	36	2	113391711	113391711	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	113391711	113391711	IL1F7	2	G	G	A	45
HS3ST5	222537	genome.wustl.edu	36	6	114486016	114486016	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	114486016	114486016	HS3ST5	6	G	G	T	36
AMPD1	270	genome.wustl.edu	36	1	115019836	115019836	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	115019836	115019836	AMPD1	1	A	A	G	12
ASZ1	136991	genome.wustl.edu	36	7	116808353	116808353	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	116808353	116808353	ASZ1	7	C	C	G	24
ROS1	6098	genome.wustl.edu	36	6	117817288	117817288	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	117817288	117817288	ROS1	6	G	G	T	42
VPS11	55823	genome.wustl.edu	36	11	118446271	118446271	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	118446271	118446271	VPS11	11	C	C	G	25
DMXL1	1657	genome.wustl.edu	36	5	118513074	118513074	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	118513074	118513074	DMXL1	5	C	C	G	32
SORL1	6653	genome.wustl.edu	36	11	120967008	120967008	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	120967008	120967008	SORL1	11	C	C	T	17
MEGF10	84466	genome.wustl.edu	36	5	126760282	126760282	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	126760282	126760282	MEGF10	5	G	G	C	48
TMEM132D	121256	genome.wustl.edu	36	12	128124816	128124816	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	128124816	128124816	TMEM132D	12	C	C	A	31
ZBTB43	23099	genome.wustl.edu	36	9	128635971	128635971	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	128635971	128635971	ZBTB43	9	C	C	T	19
LCT	3938	genome.wustl.edu	36	2	136283476	136283476	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	136283476	136283476	LCT	2	C	C	A	18
BRAF	673	genome.wustl.edu	36	7	140095638	140095638	+	Nonsense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	140095638	140095638	BRAF	7	G	G	C	45
ZNF398	57541	genome.wustl.edu	36	7	148482062	148482062	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	148482062	148482062	ZNF398	7	A	A	G	7
IGSF10	285313	genome.wustl.edu	36	3	152647214	152647214	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152647214	152647214	IGSF10	3	G	G	C	47
ZBTB7B	51043	genome.wustl.edu	36	1	153254330	153254330	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	A	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	153254330	153254330	ZBTB7B	1	G	G	A	38
DCST2	127579	genome.wustl.edu	36	1	153269192	153269192	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	153269192	153269192	DCST2	1	A	A	C	12
ARHGEF11	9826	genome.wustl.edu	36	1	155192962	155192962	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	155192962	155192962	ARHGEF11	1	G	G	A	43
FCRL1	115350	genome.wustl.edu	36	1	156038510	156038510	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	156038510	156038510	FCRL1	1	A	A	G	11
OR10X1	128367	genome.wustl.edu	36	1	156816153	156816153	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	156816153	156816153	OR10X1	1	G	G	T	44
PHC3	80012	genome.wustl.edu	36	3	171329851	171329851	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	171329851	171329851	PHC3	3	T	T	G	55
LOC643997	643997	genome.wustl.edu	36	2	174058986	174058986	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	174058986	174058986	LOC643997	2	G	G	C	47
ADAM29	11086	genome.wustl.edu	36	4	176134255	176134255	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	176134255	176134255	ADAM29	4	G	G	T	44
ADAM29	11086	genome.wustl.edu	36	4	176134344	176134344	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	176134344	176134344	ADAM29	4	A	A	G	13
PLEKHA3	65977	genome.wustl.edu	36	2	179058628	179058628	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	179058628	179058628	PLEKHA3	2	T	T	A	63
FAT1	2195	genome.wustl.edu	36	4	187867227	187867227	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	187867227	187867227	FAT1	4	G	G	A	42
ASPM	259266	genome.wustl.edu	36	1	195337279	195337279	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	195337279	195337279	ASPM	1	C	C	T	28
MPP4	58538	genome.wustl.edu	36	2	202258973	202258973	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	202258973	202258973	MPP4	2	G	G	C	44
ABCA12	26154	genome.wustl.edu	36	2	215548940	215548940	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	215548940	215548940	ABCA12	2	A	A	G	16
RYR2	6262	genome.wustl.edu	36	1	235930157	235930157	+	Missense_Mutation	SNP	T	A	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	T	T	A	T	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	235930157	235930157	RYR2	1	T	A	T	59
HMCN1	83872	genome.wustl.edu	36	1	184418038	184418038	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	184418038	184418038	HMCN1	1	C	C	T	26
SESN2	83667	genome.wustl.edu	36	1	28474027	28474027	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	28474027	28474027	SESN2	1	C	C	T	17
MMP7	4316	genome.wustl.edu	36	11	101906626	101906626	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101906626	101906626	MMP7	11	G	G	T	34
DAGLA	747	genome.wustl.edu	36	11	61267804	61267804	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	61267804	61267804	DAGLA	11	G	G	C	42
DNAH10	196385	genome.wustl.edu	36	12	122838342	122838342	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	122838342	122838342	DNAH10	12	C	C	A	26
C15orf48	84419	genome.wustl.edu	36	15	43510545	43510545	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	C	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43510545	43510545	C15orf48	15	G	G	C	38
HMX1	3166	genome.wustl.edu	36	4	43601	43601	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	43601	43601	HMX1	4	G	G	A	38
CEP135	9662	genome.wustl.edu	36	4	56572877	56572877	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56572877	56572877	CEP135	4	G	G	T	33
TSSK1B	83942	genome.wustl.edu	36	5	112797869	112797869	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	112797869	112797869	TSSK1B	5	G	G	A	46
KCNH2	3757	genome.wustl.edu	36	7	150280856	150280856	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	150280856	150280856	KCNH2	7	C	C	T	31
PTPRN2	5799	genome.wustl.edu	36	7	157652543	157652543	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	157652543	157652543	PTPRN2	7	C	C	G	25
SLC38A5	92745	genome.wustl.edu	36	X	48209620	48209620	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48209620	48209620	SLC38A5	23	G	G	A	46
USP51	158880	genome.wustl.edu	36	X	55530169	55530169	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1347-01	TCGA-04-1347-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55530169	55530169	USP51	23	C	C	T	25
ANP32D	23519	genome.wustl.edu	36	12	47153049	47153051	+	In_Frame_Del	DEL	TAG	TAG	-		Unknown	TCGA-04-1347-01	TCGA-04-1347-11	TAG	TAG	TAG	-	TAG	TAG	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	47153049	47153051	ANP32D	12	TAG	TAG	-	61