Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
DOCK8	81704	genome.wustl.edu	36	9	362251	362251	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	362251	362251	DOCK8	9	A	A	T	1
ABCA3	21	genome.wustl.edu	36	16	2269010	2269010	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	2269010	2269010	ABCA3	16	G	G	A	38
TGM6	343641	genome.wustl.edu	36	20	2332442	2332442	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	2332442	2332442	TGM6	20	A	A	G	8
ZNF200	7752	genome.wustl.edu	36	16	3214442	3214442	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3214442	3214442	ZNF200	16	C	C	A	30
OTOP1	133060	genome.wustl.edu	36	4	4250353	4250353	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	4250353	4250353	OTOP1	4	C	C	T	23
TP53	7157	genome.wustl.edu	36	17	7520037	7520037	+	Silent	SNP	C	C	A	rs55863639	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	7520037	7520037	TP53	17	C	C	A	23
TMEM186	25880	genome.wustl.edu	36	16	8797350	8797350	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8797350	8797350	TMEM186	16	C	C	T	19
MUC16	94025	genome.wustl.edu	36	19	8854503	8854503	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	8854503	8854503	MUC16	19	G	G	T	46
GRIN2A	2903	genome.wustl.edu	36	16	9842061	9842061	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9842061	9842061	GRIN2A	16	C	C	T	30
KRI1	65095	genome.wustl.edu	36	19	10531330	10531330	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10531330	10531330	KRI1	19	T	T	C	55
ENSG00000183704	0	genome.wustl.edu	36	Y	11960742	11960742	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	11960742	11960742	ENSG00000183704	24	G	G	A	37
PROM1	8842	genome.wustl.edu	36	4	15629230	15629230	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	15629230	15629230	PROM1	4	G	G	T	48
USHBP1	83878	genome.wustl.edu	36	19	17228458	17228458	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17228458	17228458	USHBP1	19	C	C	T	19
ZNF70	7621	genome.wustl.edu	36	22	22416469	22416469	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	22416469	22416469	ZNF70	22	T	T	C	62
STK31	56164	genome.wustl.edu	36	7	23741746	23741746	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23741746	23741746	STK31	7	C	C	G	32
HIST1H3A	8350	genome.wustl.edu	36	6	26128756	26128756	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26128756	26128756	HIST1H3A	6	G	G	T	36
SEC14L3	266629	genome.wustl.edu	36	22	29187550	29187550	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29187550	29187550	SEC14L3	22	G	G	C	38
OR12D3	81797	genome.wustl.edu	36	6	29450715	29450715	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29450715	29450715	OR12D3	6	G	G	A	42
SPOCD1	90853	genome.wustl.edu	36	1	32036456	32036456	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32036456	32036456	SPOCD1	1	A	A	C	8
TOPORS	10210	genome.wustl.edu	36	9	32534141	32534141	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32534141	32534141	TOPORS	9	C	C	T	17
GSS	2937	genome.wustl.edu	36	20	32997502	32997502	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32997502	32997502	GSS	20	G	G	C	46
CACNB1	782	genome.wustl.edu	36	17	34593507	34593507	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34593507	34593507	CACNB1	17	C	G	G	32
CA9	768	genome.wustl.edu	36	9	35664151	35664151	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	35664151	35664151	CA9	9	G	G	A	46
MELK	9833	genome.wustl.edu	36	9	36641858	36641858	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36641858	36641858	MELK	9	C	C	T	21
HLCS	3141	genome.wustl.edu	36	21	37231367	37231367	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37231367	37231367	HLCS	21	C	C	T	20
C15orf57	90416	genome.wustl.edu	36	15	38642302	38642302	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38642302	38642302	C15orf57	15	C	C	G	26
CHD6	84181	genome.wustl.edu	36	20	39507731	39507731	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39507731	39507731	CHD6	20	C	C	T	19
LSR	51599	genome.wustl.edu	36	19	40445327	40445327	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40445327	40445327	LSR	19	C	C	G	24
FAM75A3	727830	genome.wustl.edu	36	9	40694394	40694394	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40694394	40694394	FAM75A3	9	G	G	A	35
ZNF585A	199704	genome.wustl.edu	36	19	42335087	42335087	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	42335087	42335087	ZNF585A	19	C	C	T	22
SLC20A2	6575	genome.wustl.edu	36	8	42448973	42448973	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	42448973	42448973	SLC20A2	8	G	G	A	36
FBLN1	2192	genome.wustl.edu	36	22	44293295	44293295	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	44293295	44293295	FBLN1	22	G	G	A	46
ARID2	196528	genome.wustl.edu	36	12	44531669	44531669	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	44531669	44531669	ARID2	12	G	G	C	35
B4GALNT2	124872	genome.wustl.edu	36	17	44601986	44601986	+	Missense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	44601986	44601986	B4GALNT2	17	C	A	A	26
TRMU	55687	genome.wustl.edu	36	22	45121059	45121059	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	45121059	45121059	TRMU	22	T	T	G	61
ATP5S	27109	genome.wustl.edu	36	14	49862185	49862185	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	49862185	49862185	ATP5S	14	G	G	A	45
ATP5S	27109	genome.wustl.edu	36	14	49868648	49868648	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	49868648	49868648	ATP5S	14	G	G	T	45
MYO5C	55930	genome.wustl.edu	36	15	50359100	50359100	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50359100	50359100	MYO5C	15	C	C	T	22
RAD54L2	23132	genome.wustl.edu	36	3	51648655	51648655	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51648655	51648655	RAD54L2	3	A	A	C	15
THSD1	55901	genome.wustl.edu	36	13	51870016	51870016	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51870016	51870016	THSD1	13	C	C	A	18
RDH5	5959	genome.wustl.edu	36	12	54404013	54404013	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54404013	54404013	RDH5	12	G	G	A	41
ATP5B	506	genome.wustl.edu	36	12	55325235	55325235	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	55325235	55325235	ATP5B	12	C	C	G	21
CCDC85A	114800	genome.wustl.edu	36	2	56273230	56273230	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56273230	56273230	CCDC85A	2	C	C	T	31
ZNF614	80110	genome.wustl.edu	36	19	57212179	57212179	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	57212179	57212179	ZNF614	19	C	C	T	29
ANXA2	302	genome.wustl.edu	36	15	58436718	58436718	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	58436718	58436718	ANXA2	15	T	T	G	60
FEN1	2237	genome.wustl.edu	36	11	61320362	61320362	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	61320362	61320362	FEN1	11	A	A	T	11
HERC1	8925	genome.wustl.edu	36	15	61751786	61751786	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	61751786	61751786	HERC1	15	T	T	G	51
GANAB	23193	genome.wustl.edu	36	11	62163677	62163677	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	62163677	62163677	GANAB	11	G	G	A	46
SPTB	6710	genome.wustl.edu	36	14	64309076	64309076	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	64309076	64309076	SPTB	14	C	C	T	23
ENSG00000205152		genome.wustl.edu	36	16	68825581	68825581	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	C	T	C	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	68825581	68825581	ENSG00000205152	16	T	T	C	63
WDR61	80349	genome.wustl.edu	36	15	76369034	76369034	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	76369034	76369034	WDR61	15	G	G	A	36
NT5E	4907	genome.wustl.edu	36	6	86251818	86251818	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	86251818	86251818	NT5E	6	G	G	A	40
GRM3	2913	genome.wustl.edu	36	7	86306689	86306689	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	86306689	86306689	GRM3	7	T	T	C	59
BARHL2	343472	genome.wustl.edu	36	1	90950709	90950709	+	Nonsense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	90950709	90950709	BARHL2	1	G	G	C	36
VSIG1	340547	genome.wustl.edu	36	X	107196873	107196873	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	107196873	107196873	VSIG1	23	C	C	G	31
ATP2A2	488	genome.wustl.edu	36	12	109204980	109204980	+	Silent	SNP	T	C	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	109204980	109204980	ATP2A2	12	T	C	C	56
MYH15	22989	genome.wustl.edu	36	3	109678039	109678039	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	109678039	109678039	MYH15	3	A	A	T	7
PIH1D2	120379	genome.wustl.edu	36	11	111443833	111443833	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111443833	111443833	PIH1D2	11	G	G	A	40
CTTNBP2	83992	genome.wustl.edu	36	7	117211650	117211650	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	117211650	117211650	CTTNBP2	7	T	T	G	62
GFRA1	2674	genome.wustl.edu	36	10	117874815	117874815	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	117874815	117874815	GFRA1	10	C	C	A	31
KIAA1109	84162	genome.wustl.edu	36	4	123380667	123380667	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	123380667	123380667	KIAA1109	4	T	T	A	56
TACC2	10579	genome.wustl.edu	36	10	123837268	123837268	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	123837268	123837268	TACC2	10	G	G	T	42
GRM8	2918	genome.wustl.edu	36	7	126670303	126670303	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	126670303	126670303	GRM8	7	A	A	C	6
MEGF10	84466	genome.wustl.edu	36	5	126786259	126786259	+	Splice_Site_SNP	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	126786259	126786259	MEGF10	5	A	A	T	7
ASAP1	50807	genome.wustl.edu	36	8	131142205	131142205	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	131142205	131142205	ASAP1	8	C	C	G	25
FRG2B	441581	genome.wustl.edu	36	10	135289005	135289005	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	C	T	C	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135289005	135289005	FRG2B	10	T	T	C	50
NXPH2	11249	genome.wustl.edu	36	2	139145435	139145435	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	139145435	139145435	NXPH2	2	A	A	T	4
NXPH2	11249	genome.wustl.edu	36	2	139145697	139145697	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	139145697	139145697	NXPH2	2	A	A	T	6
ANKHD1-EIF4EBP3	8637	genome.wustl.edu	36	5	139908732	139908732	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	139908732	139908732	ANKHD1-EIF4EBP3	5	C	C	T	26
ENSG00000211729		genome.wustl.edu	36	7	141876211	141876211	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	141876211	141876211	ENSG00000211729	7	A	A	G	12
TXNIP	10628	genome.wustl.edu	36	1	144151420	144151420	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	144151420	144151420	TXNIP	1	A	A	G	3
GRPEL2	134266	genome.wustl.edu	36	5	148708089	148708089	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	148708089	148708089	GRPEL2	5	G	G	C	45
FLG	2312	genome.wustl.edu	36	1	150543537	150543537	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	150543537	150543537	FLG	1	T	T	G	62
MLL3	58508	genome.wustl.edu	36	7	151593143	151593143	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	151593143	151593143	MLL3	7	T	T	G	49
DUSP9	1852	genome.wustl.edu	36	X	152568775	152568775	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152568775	152568775	DUSP9	23	A	A	T	13
MBNL1	4154	genome.wustl.edu	36	3	153500755	153500755	+	Nonsense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	153500755	153500755	MBNL1	3	C	G	G	29
MPP1	4354	genome.wustl.edu	36	X	153673314	153673314	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	153673314	153673314	MPP1	23	T	T	A	62
YY1AP1	55249	genome.wustl.edu	36	1	153905118	153905118	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	153905118	153905118	YY1AP1	1	G	G	C	44
KIF4B	285643	genome.wustl.edu	36	5	154374459	154374459	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	154374459	154374459	KIF4B	5	G	G	T	43
FCRL5	83416	genome.wustl.edu	36	1	155779292	155779292	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	155779292	155779292	FCRL5	1	A	A	C	7
PKP4	8502	genome.wustl.edu	36	2	159227670	159227670	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	159227670	159227670	PKP4	2	G	G	A	40
USP21	27005	genome.wustl.edu	36	1	159398689	159398689	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	159398689	159398689	USP21	1	C	C	T	30
BAZ2B	29994	genome.wustl.edu	36	2	159948437	159948437	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	159948437	159948437	BAZ2B	2	A	A	T	6
LPA	4018	genome.wustl.edu	36	6	160976228	160976228	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	160976228	160976228	LPA	6	G	G	A	40
DDX60L	91351	genome.wustl.edu	36	4	169552223	169552223	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	169552223	169552223	DDX60L	4	C	C	G	17
TTN	7273	genome.wustl.edu	36	2	179166415	179166415	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	179166415	179166415	TTN	2	G	G	C	48
TTN	7273	genome.wustl.edu	36	2	179313341	179313341	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	179313341	179313341	TTN	2	C	C	A	28
ATP13A3	79572	genome.wustl.edu	36	3	195633836	195633836	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	195633836	195633836	ATP13A3	3	C	C	A	25
ALS2CR11	151254	genome.wustl.edu	36	2	202138809	202138809	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	202138809	202138809	ALS2CR11	2	G	G	T	41
CD34	947	genome.wustl.edu	36	1	206128671	206128671	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	206128671	206128671	CD34	1	C	C	G	30
RBM34	23029	genome.wustl.edu	36	1	233390906	233390906	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	233390906	233390906	RBM34	1	A	A	G	6
CEP170	9859	genome.wustl.edu	36	1	241402644	241402644	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	241402644	241402644	CEP170	1	G	G	A	48
KDM5B		genome.wustl.edu	36	1	200978199	200978199	+	Frame_Shift_Ins	INS	-	C	C	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	-	C	C	C	-	-	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Frame_Shift_Ins	INS	200978199	200978199	KDM5B	1	-	C	C	20
TRIM46	80128	genome.wustl.edu	36	1	153421128	153421128	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	153421128	153421128	TRIM46	1	C	C	G	21
ROBO4	54538	genome.wustl.edu	36	11	124268986	124268986	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0755-01	TCGA-13-0755-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	124268986	124268986	ROBO4	11	G	G	T	34
SFRS8	6433	genome.wustl.edu	36	12	130849938	130849938	+	Silent	SNP	C	C	T		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	130849938	130849938	SFRS8	12	C	C	T	29
FBXL14	144699	genome.wustl.edu	36	12	1572492	1572492	+	Silent	SNP	C	C	T		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	1572492	1572492	FBXL14	12	C	C	T	27
AVPR1B	553	genome.wustl.edu	36	1	204391958	204391958	+	Frame_Shift_Del	DEL	A	A	-		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	A	A	A	-	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	204391958	204391958	AVPR1B	1	A	A	-	7
SR140	23350	genome.wustl.edu	36	3	144239733	144239744	+	Frame_Shift_Del	DEL	GGGTGAGTAAAAG	GGGTGAGTAAAAG	-		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	GGGTGAGTAAAAG	GGGTGAGTAAAAG	GGGTGAGTAAAAG	-	GGGTGAGTAAAAG	GGGTGAGTAAAAG	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	144239733	144239744	SR140	3	GGGTGAGTAAAAG	GGGTGAGTAAAAG	-	7
YIPF5	81555	genome.wustl.edu	36	5	143520217	143520225	+	In_Frame_Del	DEL	TTGCTGTCC	TTGCTGTCC	-		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	TTGCTGTCC	TTGCTGTCC	TTGCTGTCC	-	TTGCTGTCC	TTGCTGTCC	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	143520217	143520225	YIPF5	5	TTGCTGTCC	TTGCTGTCC	-	60
LASS4	79603	genome.wustl.edu	36	19	8228867	8228867	+	Silent	SNP	C	C	A		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	C	C	C	A	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	8228867	8228867	LASS4	19	C	C	A	22
ASPRV1	151516	genome.wustl.edu	36	2	70042190	70042190	+	Frame_Shift_Del	DEL	T	T	-		Unknown	TCGA-13-0755-01	TCGA-13-0755-10	T	T	T	-	T	T	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	70042190	70042190	ASPRV1	2	T	T	-	56