Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
PPL	5493	genome.wustl.edu	36	16	4877136	4877136	+	Splice_Site_SNP	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	4877136	4877136	PPL	16	C	C	T	18
SCNN1G	6340	genome.wustl.edu	36	16	23113021	23113021	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23113021	23113021	SCNN1G	16	C	C	T	25
GSX1	219409	genome.wustl.edu	36	13	27266002	27266002	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	27266002	27266002	GSX1	13	A	A	T	5
LOC642424		genome.wustl.edu	36	10	42000954	42000954	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	42000954	42000954	LOC642424	10	G	G	C	33
DNAJC14	85406	genome.wustl.edu	36	12	54508469	54508469	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54508469	54508469	DNAJC14	12	G	G	A	41
ZNF479	90827	genome.wustl.edu	36	7	57191653	57191653	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	57191653	57191653	ZNF479	7	C	C	T	21
RARRES3	5920	genome.wustl.edu	36	11	63063575	63063575	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	63063575	63063575	RARRES3	11	G	G	T	34
GLG1	2734	genome.wustl.edu	36	16	73043497	73043497	+	Missense_Mutation	SNP	T	G	G	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	T	T	G	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73043497	73043497	GLG1	16	T	G	G	56
LIMK1	3984	genome.wustl.edu	36	7	73158455	73158455	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73158455	73158455	LIMK1	7	C	C	A	23
PI15	51050	genome.wustl.edu	36	8	75918788	75918788	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	75918788	75918788	PI15	8	T	T	A	63
CYLC1	1538	genome.wustl.edu	36	X	83015558	83015558	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	83015558	83015558	CYLC1	23	A	A	C	5
ZNF592	9640	genome.wustl.edu	36	15	83128692	83128692	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	83128692	83128692	ZNF592	15	C	C	T	19
CDC14B	8555	genome.wustl.edu	36	9	98305889	98305889	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	98305889	98305889	CDC14B	9	G	G	A	33
ARMCX5	64860	genome.wustl.edu	36	X	101744756	101744756	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101744756	101744756	ARMCX5	23	C	C	G	20
TDG	6996	genome.wustl.edu	36	12	102903529	102903529	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102903529	102903529	TDG	12	C	C	T	28
LPAR1	1902	genome.wustl.edu	36	9	112744091	112744091	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	112744091	112744091	LPAR1	9	T	T	C	49
ATRNL1	26033	genome.wustl.edu	36	10	117144159	117144159	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	117144159	117144159	ATRNL1	10	C	C	G	28
PTPRN2	5799	genome.wustl.edu	36	7	157080742	157080742	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	157080742	157080742	PTPRN2	7	C	C	T	19
ILDR2	387597	genome.wustl.edu	36	1	165172558	165172558	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	165172558	165172558	ILDR2	1	G	G	A	33
ASTN1	460	genome.wustl.edu	36	1	175259324	175259324	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	175259324	175259324	ASTN1	1	C	C	A	27
HMCN1	83872	genome.wustl.edu	36	1	184358857	184358857	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	184358857	184358857	HMCN1	1	C	C	T	30
MAP1LC3C	440738	genome.wustl.edu	36	1	240226291	240226291	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	240226291	240226291	MAP1LC3C	1	C	C	T	28
TP53	7157	genome.wustl.edu	36	17	7517871	7517872	+	In_Frame_Ins	INS	-	-	AGATTACCACTACTC	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Ins	INS	7517871	7517872	TP53	17	-	-	AGATTACCACTACTC	57
CPZ	8532	genome.wustl.edu	36	4	8660021	8660023	+	In_Frame_Del	DEL	AGA	AGA	-	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	AGA	AGA	AGA	-	AGA	AGA	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	8660021	8660023	CPZ	4	AGA	AGA	-	11
OR51I2	390064	genome.wustl.edu	36	11	5432027	5432027	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	5432027	5432027	OR51I2	11	A	A	G	16
ENSG00000215398		genome.wustl.edu	36	14	18188280	18188280	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18188280	18188280	ENSG00000215398	14	C	C	T	19
SLC39A11	201266	genome.wustl.edu	36	17	68596423	68596424	+	Missense	DNP	CC	CC	AG	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	68596423	68596424	SLC39A11	17	CC	CC	AG	26
C6	729	genome.wustl.edu	36	5	41185273	41185273	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0765-01	TCGA-13-0765-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41185273	41185273	C6	5	T	T	C	56