Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context PLEKHG4B 153478 genome.wustl.edu 36 5 209279 209279 + Missense_Mutation SNP G G T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 209279 209279 PLEKHG4B 5 G G T 40 SH3YL1 26751 genome.wustl.edu 36 2 221084 221084 + Missense_Mutation SNP T T C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 221084 221084 SH3YL1 2 T T C 49 TGM3 7053 genome.wustl.edu 36 20 2260705 2260705 + Missense_Mutation SNP C C G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2260705 2260705 TGM3 20 C C G 19 ABCA3 21 genome.wustl.edu 36 16 2298452 2298452 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2298452 2298452 ABCA3 16 C C T 24 NQO2 4835 genome.wustl.edu 36 6 2960781 2960781 + Missense_Mutation SNP A A T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2960781 2960781 NQO2 6 A A T 7 TP53 7157 genome.wustl.edu 36 17 7518263 7518263 + Missense_Mutation SNP C C T rs11540652 Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7518263 7518263 TP53 17 C C T 23 FBN3 84467 genome.wustl.edu 36 19 8112902 8112902 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8112902 8112902 FBN3 19 G G A 41 CCDC42 146849 genome.wustl.edu 36 17 8587687 8587687 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8587687 8587687 CCDC42 17 C C A 20 LOC646359 646359 genome.wustl.edu 36 18 14367947 14367947 + Silent SNP T T C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 14367947 14367947 LOC646359 18 T T C 64 PROM1 8842 genome.wustl.edu 36 4 15600486 15600486 + Missense_Mutation SNP G G T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15600486 15600486 PROM1 4 G G T 44 SPATA21 374955 genome.wustl.edu 36 1 16598576 16598576 + Missense_Mutation SNP T T C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 16598576 16598576 SPATA21 1 T T C 55 PADI3 51702 genome.wustl.edu 36 1 17472520 17472520 + Missense_Mutation SNP A A T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17472520 17472520 PADI3 1 A A T 1 ACTL8 81569 genome.wustl.edu 36 1 18025484 18025484 + Missense_Mutation SNP G G C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18025484 18025484 ACTL8 1 G G C 43 UBR4 23352 genome.wustl.edu 36 1 19366167 19366167 + Missense_Mutation SNP G G C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19366167 19366167 UBR4 1 G G C 37 CDH10 1008 genome.wustl.edu 36 5 24571018 24571018 + Silent SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 24571018 24571018 CDH10 5 C C T 27 SLC17A3 10786 genome.wustl.edu 36 6 25970218 25970218 + Missense_Mutation SNP A A T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 25970218 25970218 SLC17A3 6 A A T 10 HIST1H4H 8365 genome.wustl.edu 36 6 26393660 26393660 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26393660 26393660 HIST1H4H 6 G G A 34 FLT1 2321 genome.wustl.edu 36 13 27878000 27878000 + Missense_Mutation SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27878000 27878000 FLT1 13 A A G 3 CEP250 11190 genome.wustl.edu 36 20 33559424 33559424 + Silent SNP C C G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 33559424 33559424 CEP250 20 C C G 24 PLXDC1 57125 genome.wustl.edu 36 17 34549525 34549525 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 34549525 34549525 PLXDC1 17 C C A 17 DSN1 79980 genome.wustl.edu 36 20 34829827 34829827 + Nonsense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 34829827 34829827 DSN1 20 C C A 32 SLC1A2 6506 genome.wustl.edu 36 11 35290516 35290516 + Silent SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 35290516 35290516 SLC1A2 11 C C A 17 FANCE 2178 genome.wustl.edu 36 6 35531959 35531959 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35531959 35531959 FANCE 6 C C T 17 CLSPN 63967 genome.wustl.edu 36 1 35998743 35998743 + Missense_Mutation SNP G G C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35998743 35998743 CLSPN 1 G G C 35 THRAP3 9967 genome.wustl.edu 36 1 36534860 36534860 + Silent SNP T T A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 36534860 36534860 THRAP3 1 T T A 57 SCN5A 6331 genome.wustl.edu 36 3 38602210 38602210 + Silent SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 38602210 38602210 SCN5A 3 A A G 5 XRCC6 2547 genome.wustl.edu 36 22 40379603 40379603 + Missense_Mutation SNP A A C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 40379603 40379603 XRCC6 22 A A C 3 ZFP106 64397 genome.wustl.edu 36 15 40529814 40529814 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 40529814 40529814 ZFP106 15 C C T 30 ZNF167 55888 genome.wustl.edu 36 3 44586786 44586786 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 44586786 44586786 ZNF167 3 C C T 31 SNRPA 6626 genome.wustl.edu 36 19 45957227 45957227 + Missense_Mutation SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45957227 45957227 SNRPA 19 A A G 6 ARHGEF1 9138 genome.wustl.edu 36 19 47084732 47084732 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47084732 47084732 ARHGEF1 19 G G A 42 CKAP2 26586 genome.wustl.edu 36 13 51946157 51946157 + Missense_Mutation SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 51946157 51946157 CKAP2 13 A A G 4 KIAA0748 9840 genome.wustl.edu 36 12 53641242 53641242 + Missense_Mutation SNP G G T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 53641242 53641242 KIAA0748 12 G G T 36 DHX29 54505 genome.wustl.edu 36 5 54616938 54616938 + Silent SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 54616938 54616938 DHX29 5 A A G 8 OR5M1 390168 genome.wustl.edu 36 11 56137236 56137236 + Silent SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 56137236 56137236 OR5M1 11 G G A 35 LOC728500 728500 genome.wustl.edu 36 7 57009139 57009139 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57009139 57009139 LOC728500 7 G G A 46 DNAJC6 9829 genome.wustl.edu 36 1 65627639 65627639 + Nonsense_Mutation SNP G G T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 65627639 65627639 DNAJC6 1 G G T 41 SHANK2 22941 genome.wustl.edu 36 11 70009842 70009842 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70009842 70009842 SHANK2 11 C C A 30 MUC7 4589 genome.wustl.edu 36 4 71381416 71381416 + Silent SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 71381416 71381416 MUC7 4 A A G 1 ZNF236 7776 genome.wustl.edu 36 18 72692796 72692796 + Silent SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 72692796 72692796 ZNF236 18 G G A 43 KIAA0317 9870 genome.wustl.edu 36 14 74219932 74219932 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74219932 74219932 KIAA0317 14 G G A 45 C14orf178 283579 genome.wustl.edu 36 14 77305763 77305763 + Missense_Mutation SNP G G T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 77305763 77305763 C14orf178 14 G G T 46 RBM26 64062 genome.wustl.edu 36 13 78831779 78831779 + Silent SNP T T G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 78831779 78831779 RBM26 13 T T G 55 MDN1 23195 genome.wustl.edu 36 6 90479147 90479147 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 90479147 90479147 MDN1 6 C C A 30 TNKS2 80351 genome.wustl.edu 36 10 93592071 93592071 + Missense_Mutation SNP G G C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 93592071 93592071 TNKS2 10 G G C 45 FANCC 2176 genome.wustl.edu 36 9 97042810 97042810 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 97042810 97042810 FANCC 9 C C A 17 TCEAL8 90843 genome.wustl.edu 36 X 102395435 102395435 + Silent SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 102395435 102395435 TCEAL8 23 G G A 42 ZFPM2 23414 genome.wustl.edu 36 8 106525714 106525714 + Missense_Mutation SNP A A G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 106525714 106525714 ZFPM2 8 A A G 9 PTPN3 5774 genome.wustl.edu 36 9 111224844 111224844 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111224844 111224844 PTPN3 9 G G A 37 ABCG4 64137 genome.wustl.edu 36 11 118536908 118536908 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 118536908 118536908 ABCG4 11 C C T 27 HSD3B2 3284 genome.wustl.edu 36 1 119766708 119766708 + Missense_Mutation SNP A A T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 119766708 119766708 HSD3B2 1 A A T 11 PCDHA4 56144 genome.wustl.edu 36 5 140169017 140169017 + Silent SNP G G C novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 140169017 140169017 PCDHA4 5 G G C 47 PCDHGA5 56110 genome.wustl.edu 36 5 140725485 140725485 + Silent SNP T T G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 140725485 140725485 PCDHGA5 5 T T G 59 TRPC1 7220 genome.wustl.edu 36 3 143994491 143994491 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 143994491 143994491 TRPC1 3 C C T 30 DPYSL3 1809 genome.wustl.edu 36 5 146775599 146775599 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 146775599 146775599 DPYSL3 5 C C T 28 NEB 4703 genome.wustl.edu 36 2 152220659 152220659 + Missense_Mutation SNP T T G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152220659 152220659 NEB 2 T T G 59 TIAM2 26230 genome.wustl.edu 36 6 155492159 155492159 + Missense_Mutation SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 155492159 155492159 TIAM2 6 C C T 25 OR6K3 391114 genome.wustl.edu 36 1 156954197 156954197 + Missense_Mutation SNP C C G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 156954197 156954197 OR6K3 1 C C G 24 TLL1 7092 genome.wustl.edu 36 4 167135691 167135691 + Silent SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 167135691 167135691 TLL1 4 C C T 21 ITGA6 3655 genome.wustl.edu 36 2 173052679 173052679 + Missense_Mutation SNP C C A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 173052679 173052679 ITGA6 2 C C A 21 HMCN1 83872 genome.wustl.edu 36 1 184258889 184258889 + Silent SNP C C T novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 184258889 184258889 HMCN1 1 C C T 17 HECW2 57520 genome.wustl.edu 36 2 196880187 196880187 + Silent SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 196880187 196880187 HECW2 2 G G A 46 IPO9 55705 genome.wustl.edu 36 1 200087914 200087914 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 200087914 200087914 IPO9 1 G G A 33 KCTD3 51133 genome.wustl.edu 36 1 213813754 213813754 + Missense_Mutation SNP T T G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 213813754 213813754 KCTD3 1 T T G 64 TP53 7157 genome.wustl.edu 36 17 7517846 7517846 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G A A G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA;Sanger_PCR_WGA dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7517846 7517846 TP53 17 G G A 38 PADI4 23569 genome.wustl.edu 36 1 17547048 17547048 + Missense_Mutation SNP A A T Unknown TCGA-13-1499-01 TCGA-13-1499-10 A A A T A A Unknown Valid Somatic PhaseIII Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17547048 17547048 PADI4 1 A A T 5 CORO2B 10391 genome.wustl.edu 36 15 66790129 66790129 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 66790129 66790129 CORO2B 15 G G A 39 FBN3 84467 genome.wustl.edu 36 19 8097368 8097368 + Silent SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 8097368 8097368 FBN3 19 G G A 38 MAP4K3 8491 genome.wustl.edu 36 2 39368821 39368821 + Missense_Mutation SNP T T G novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 39368821 39368821 MAP4K3 2 T T G 56 PCDHA10 56139 genome.wustl.edu 36 5 140217927 140217927 + Missense_Mutation SNP G G A novel Unknown TCGA-13-1499-01 TCGA-13-1499-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 140217927 140217927 PCDHA10 5 G G A 38