Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
PITPNA	5306	genome.wustl.edu	36	17	1388963	1388963	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1388963	1388963	PITPNA	17	C	C	T	19
LPCAT1	79888	genome.wustl.edu	36	5	1516851	1516851	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1516851	1516851	LPCAT1	5	G	G	A	38
PARP11	57097	genome.wustl.edu	36	12	3791822	3791822	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3791822	3791822	PARP11	12	T	T	C	63
DNAH2	146754	genome.wustl.edu	36	17	7601149	7601149	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	7601149	7601149	DNAH2	17	C	C	G	32
LMCD1	29995	genome.wustl.edu	36	3	8584162	8584162	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8584162	8584162	LMCD1	3	C	C	G	32
RAD18	56852	genome.wustl.edu	36	3	8898063	8898063	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	8898063	8898063	RAD18	3	C	C	G	32
MYH4	4622	genome.wustl.edu	36	17	10303433	10303433	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10303433	10303433	MYH4	17	A	A	C	3
MYH1	4619	genome.wustl.edu	36	17	10349467	10349467	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	10349467	10349467	MYH1	17	T	T	A	58
LDLR	3949	genome.wustl.edu	36	19	11101342	11101342	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11101342	11101342	LDLR	19	C	C	T	22
MIIP	60672	genome.wustl.edu	36	1	12012533	12012533	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	12012533	12012533	MIIP	1	C	C	T	19
MC2R	4158	genome.wustl.edu	36	18	13874639	13874639	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	13874639	13874639	MC2R	18	G	G	A	46
DDX39	10212	genome.wustl.edu	36	19	14382893	14382893	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	14382893	14382893	DDX39	19	C	C	T	27
APEX1	328	genome.wustl.edu	36	14	19995128	19995128	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	19995128	19995128	APEX1	14	G	G	A	38
SLCO1B1	10599	genome.wustl.edu	36	12	21250089	21250089	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21250089	21250089	SLCO1B1	12	A	A	T	8
PHEX	5251	genome.wustl.edu	36	X	22039573	22039573	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	22039573	22039573	PHEX	23	C	C	G	29
WNT4	54361	genome.wustl.edu	36	1	22320651	22320651	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	22320651	22320651	WNT4	1	G	G	A	37
LOC653665	653665	genome.wustl.edu	36	10	29228313	29228313	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29228313	29228313	LOC653665	10	T	T	C	64
MICB	4277	genome.wustl.edu	36	6	31573958	31573959	+	Missense	DNP	GG	GG	TT	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	GG	GG	GG	TT	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	31573958	31573959	MICB	6	GG	GG	TT	47
ISX	91464	genome.wustl.edu	36	22	33811509	33811509	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	33811509	33811509	ISX	22	G	G	A	39
ZMYM6	9204	genome.wustl.edu	36	1	35247025	35247025	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35247025	35247025	ZMYM6	1	T	T	C	52
MLH1	4292	genome.wustl.edu	36	3	37028328	37028328	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37028328	37028328	MLH1	3	A	A	T	5
NIPBL	25836	genome.wustl.edu	36	5	37062130	37062130	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	37062130	37062130	NIPBL	5	A	A	G	2
MACF1	23499	genome.wustl.edu	36	1	39677659	39677659	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	39677659	39677659	MACF1	1	C	C	G	28
LRRC4C	57689	genome.wustl.edu	36	11	40094160	40094160	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40094160	40094160	LRRC4C	11	G	G	C	47
PTPRT	11122	genome.wustl.edu	36	20	40853289	40853289	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40853289	40853289	PTPRT	20	G	G	A	46
TCF20	6942	genome.wustl.edu	36	22	40938076	40938076	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	40938076	40938076	TCF20	22	G	G	C	35
TUBGCP4	27229	genome.wustl.edu	36	15	41476736	41476736	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41476736	41476736	TUBGCP4	15	A	A	C	5
YBX1	4904	genome.wustl.edu	36	1	42934991	42934991	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	42934991	42934991	YBX1	1	C	C	G	21
YBX1	4904	genome.wustl.edu	36	1	42939246	42939246	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	42939246	42939246	YBX1	1	C	C	T	23
LOC728297	728297	genome.wustl.edu	36	9	45252625	45252625	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	A	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	45252625	45252625	LOC728297	9	G	G	A	38
WFIKKN2	124857	genome.wustl.edu	36	17	46272134	46272134	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	46272134	46272134	WFIKKN2	17	G	G	C	35
SHC4	399694	genome.wustl.edu	36	15	46914506	46914506	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	46914506	46914506	SHC4	15	G	T	T	44
SLC38A5	92745	genome.wustl.edu	36	X	48203063	48203063	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	48203063	48203063	SLC38A5	23	G	G	A	37
FAM65C	140876	genome.wustl.edu	36	20	48643093	48643093	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48643093	48643093	FAM65C	20	G	G	A	43
ZNF224	7767	genome.wustl.edu	36	19	49303508	49303508	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49303508	49303508	ZNF224	19	G	G	T	41
ATF1	466	genome.wustl.edu	36	12	49489522	49489522	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49489522	49489522	ATF1	12	T	T	A	56
RELB	5971	genome.wustl.edu	36	19	50227756	50227756	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	50227756	50227756	RELB	19	C	C	G	31
PTGDR	5729	genome.wustl.edu	36	14	51804674	51804674	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51804674	51804674	PTGDR	14	G	G	T	47
GPR77	27202	genome.wustl.edu	36	19	52536795	52536795	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52536795	52536795	GPR77	19	G	G	T	38
PPM1E	22843	genome.wustl.edu	36	17	54397884	54397885	+	Missense	DNP	GA	GA	AG	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	GA	GA	GA	AG	GA	GA	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	54397884	54397885	PPM1E	17	GA	GA	AG	37
KLK12	43849	genome.wustl.edu	36	19	56225964	56225964	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56225964	56225964	KLK12	19	G	G	A	42
ZNF479	90827	genome.wustl.edu	36	7	57192019	57192019	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	57192019	57192019	ZNF479	7	T	T	C	53
GLYATL2	219970	genome.wustl.edu	36	11	58361162	58361162	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	58361162	58361162	GLYATL2	11	A	A	T	4
FAM19A2	338811	genome.wustl.edu	36	12	60435001	60435001	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	60435001	60435001	FAM19A2	12	C	C	G	32
TLN2	83660	genome.wustl.edu	36	15	60918107	60918107	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	60918107	60918107	TLN2	15	G	G	A	35
GPRC5C	55890	genome.wustl.edu	36	17	69947571	69947571	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	69947571	69947571	GPRC5C	17	G	G	A	42
CCAR1	55749	genome.wustl.edu	36	10	70177005	70177005	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70177005	70177005	CCAR1	10	G	G	C	41
PGM5	5239	genome.wustl.edu	36	9	70269854	70269854	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	70269854	70269854	PGM5	9	G	G	T	48
C9orf135	138255	genome.wustl.edu	36	9	71625735	71625735	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	71625735	71625735	C9orf135	9	G	G	A	33
PLEKHB1	58473	genome.wustl.edu	36	11	73039304	73039304	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	73039304	73039304	PLEKHB1	11	G	G	T	47
ZNF592	9640	genome.wustl.edu	36	15	83143401	83143401	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	83143401	83143401	ZNF592	15	C	C	T	17
BACH2	60468	genome.wustl.edu	36	6	90698884	90698884	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	90698884	90698884	BACH2	6	A	A	G	14
ABCA4	24	genome.wustl.edu	36	1	94321512	94321512	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	94321512	94321512	ABCA4	1	G	G	A	45
DNAJC3	5611	genome.wustl.edu	36	13	95193152	95193152	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	95193152	95193152	DNAJC3	13	T	T	A	60
DPYD	1806	genome.wustl.edu	36	1	97787702	97787702	+	Splice_Site_SNP	SNP	A	A	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	97787702	97787702	DPYD	1	A	A	T	14
TMEM131	23505	genome.wustl.edu	36	2	97797035	97797035	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	97797035	97797035	TMEM131	2	A	A	G	2
MATN2	4147	genome.wustl.edu	36	8	99109104	99109104	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	99109104	99109104	MATN2	8	G	G	T	45
CHST10	9486	genome.wustl.edu	36	2	100380953	100380953	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	100380953	100380953	CHST10	2	G	G	T	46
MYL10	93408	genome.wustl.edu	36	7	101054248	101054248	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101054248	101054248	MYL10	7	C	C	T	23
TPP2	7174	genome.wustl.edu	36	13	102078242	102078242	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102078242	102078242	TPP2	13	G	G	C	36
PKHD1L1	93035	genome.wustl.edu	36	8	110526919	110526919	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	110526919	110526919	PKHD1L1	8	G	G	A	46
ZC3H6	376940	genome.wustl.edu	36	2	112784057	112784057	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	112784057	112784057	ZC3H6	2	A	A	G	10
RBM7	10179	genome.wustl.edu	36	11	113783439	113783439	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	113783439	113783439	RBM7	11	A	A	T	4
SYNPO2	171024	genome.wustl.edu	36	4	120172443	120172443	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	120172443	120172443	SYNPO2	4	C	C	T	31
GPR81	27198	genome.wustl.edu	36	12	121780477	121780477	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	121780477	121780477	GPR81	12	G	A	A	44
C11orf63	79864	genome.wustl.edu	36	11	122335312	122335312	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	122335312	122335312	C11orf63	11	C	C	T	19
ZNF608	57507	genome.wustl.edu	36	5	124011782	124011782	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	124011782	124011782	ZNF608	5	G	G	C	36
OR1Q1	158131	genome.wustl.edu	36	9	124417536	124417536	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	124417536	124417536	OR1Q1	9	C	C	T	25
STXBP1	6812	genome.wustl.edu	36	9	129492950	129492950	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	129492950	129492950	STXBP1	9	G	G	A	34
EXOC4	60412	genome.wustl.edu	36	7	133252932	133252932	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	133252932	133252932	EXOC4	7	A	A	G	12
KDM3B	51780	genome.wustl.edu	36	5	137755843	137755843	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	137755843	137755843	KDM3B	5	C	C	A	24
PCDH1	5097	genome.wustl.edu	36	5	141223846	141223846	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	141223846	141223846	PCDH1	5	T	T	A	58
SLC9A9	285195	genome.wustl.edu	36	3	144998431	144998431	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	144998431	144998431	SLC9A9	3	G	G	A	48
SV2A	9900	genome.wustl.edu	36	1	148147730	148147730	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	148147730	148147730	SV2A	1	C	C	A	31
SETDB1	9869	genome.wustl.edu	36	1	149188556	149188556	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	149188556	149188556	SETDB1	1	C	C	G	30
SCNM1	79005	genome.wustl.edu	36	1	149407395	149407395	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	149407395	149407395	SCNM1	1	C	C	A	22
FGB	2244	genome.wustl.edu	36	4	155711031	155711031	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	155711031	155711031	FGB	4	G	G	T	33
SLC33A1	9197	genome.wustl.edu	36	3	157042984	157042984	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	157042984	157042984	SLC33A1	3	G	G	A	48
KCNAB1	7881	genome.wustl.edu	36	3	157492603	157492603	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	157492603	157492603	KCNAB1	3	G	G	A	45
SLC22A3	6581	genome.wustl.edu	36	6	160792073	160792073	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	160792073	160792073	SLC22A3	6	C	C	T	24
LOC100131991		genome.wustl.edu	36	2	177382523	177382523	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	177382523	177382523	LOC100131991	2	G	G	C	43
ANKRD44	91526	genome.wustl.edu	36	2	197578804	197578804	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	197578804	197578804	ANKRD44	2	C	C	T	24
HHAT	55733	genome.wustl.edu	36	1	208753155	208753155	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	208753155	208753155	HHAT	1	G	G	A	35
USH2A	7399	genome.wustl.edu	36	1	214039056	214039056	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	214039056	214039056	USH2A	1	C	C	A	22
RYR2	6262	genome.wustl.edu	36	1	235844285	235844285	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	235844285	235844285	RYR2	1	A	A	C	1
OR2C3	81472	genome.wustl.edu	36	1	245761802	245761802	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	245761802	245761802	OR2C3	1	A	A	C	7
TP53	7157	genome.wustl.edu	36	17	7519230	7519236	+	Frame_Shift_Del	DEL	GGGCAGG	GGGCAGG	-	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	GGGCAGG	GGGCAGG	GGGCAGG	-	GGGCAGG	GGGCAGG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	7519230	7519236	TP53	17	GGGCAGG	GGGCAGG	-	35
RPN1	6184	genome.wustl.edu	36	3	129833537	129833538	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	-	-	-	T	-	-	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Ins	INS	129833537	129833538	RPN1	3	-	-	T	40
FLG2	388698	genome.wustl.edu	36	1	150591310	150591310	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	150591310	150591310	FLG2	1	T	T	G	63
DENND4B	9909	genome.wustl.edu	36	1	152169831	152169831	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152169831	152169831	DENND4B	1	T	T	A	62
OBSCN	84033	genome.wustl.edu	36	1	226511219	226511219	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	226511219	226511219	OBSCN	1	C	C	G	26
PPP2R5C	5527	genome.wustl.edu	36	14	101453935	101453935	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101453935	101453935	PPP2R5C	14	T	T	G	58
CDCA4	55038	genome.wustl.edu	36	14	104549113	104549113	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	104549113	104549113	CDCA4	14	G	G	A	39
RBM33	155435	genome.wustl.edu	36	7	155230630	155230630	+	Nonsense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	155230630	155230630	RBM33	7	C	C	G	29
H2BFM	286436	genome.wustl.edu	36	X	103181350	103181350	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-13-1507-01	TCGA-13-1507-10	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	103181350	103181350	H2BFM	23	C	T	T	23