Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context PANK4 55229 broad.mit.edu 36 1 2442107 2442107 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 2442107 2442107 PANK4 1 T T G 58 HIVEP3 59269 broad.mit.edu 36 1 41818545 41818545 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 41818545 41818545 HIVEP3 1 G G A 45 PRKAA2 5563 broad.mit.edu 36 1 56945831 56945831 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 56945831 56945831 PRKAA2 1 A A G 2 HIPK1 204851 broad.mit.edu 36 1 114284761 114284761 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 114284761 114284761 HIPK1 1 C C A 28 CRCT1 54544 broad.mit.edu 36 1 150754708 150754708 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 150754708 150754708 CRCT1 1 C C T 28 C1orf85 112770 broad.mit.edu 36 1 154531240 154531240 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 154531240 154531240 C1orf85 1 G G A 39 COPA 1314 broad.mit.edu 36 1 158535565 158535565 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 158535565 158535565 COPA 1 G G A 43 ADAMTS4 9507 broad.mit.edu 36 1 159430439 159430439 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 159430439 159430439 ADAMTS4 1 G G C 36 IER5 51278 broad.mit.edu 36 1 179324748 179324748 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 179324748 179324748 IER5 1 G G A 34 USH2A 7399 broad.mit.edu 36 1 214128935 214128935 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 214128935 214128935 USH2A 1 T T C 52 LDB3 11155 broad.mit.edu 36 10 88466430 88466430 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 88466430 88466430 LDB3 10 G G A 35 IDE 3416 broad.mit.edu 36 10 94224601 94224601 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 94224601 94224601 IDE 10 T T G 50 MMP21 118856 broad.mit.edu 36 10 127450866 127450866 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 127450866 127450866 MMP21 10 G G A 40 INTS4 92105 broad.mit.edu 36 11 77317144 77317144 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 77317144 77317144 INTS4 11 G G A 40 FLI1 2313 broad.mit.edu 36 11 128185730 128185730 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 C T C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Silent SNP 128185730 128185730 FLI1 11 C C T 19 SLCO1C1 53919 broad.mit.edu 36 12 20781368 20781368 + Missense_Mutation SNP A A T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 20781368 20781368 SLCO1C1 12 A A T 4 SP1 6667 broad.mit.edu 36 12 52086700 52086700 + Silent SNP A A T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 52086700 52086700 SP1 12 A A T 7 NEUROD4 58158 broad.mit.edu 36 12 53706805 53706805 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 53706805 53706805 NEUROD4 12 C C T 19 STAT6 6778 broad.mit.edu 36 12 55788308 55788308 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 55788308 55788308 STAT6 12 G G A 33 TRHDE 29953 broad.mit.edu 36 12 71179595 71179595 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 71179595 71179595 TRHDE 12 C C T 19 C12orf34 84915 broad.mit.edu 36 12 108690202 108690202 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 108690202 108690202 C12orf34 12 G G A 37 CCDC62 84660 broad.mit.edu 36 12 121842531 121842531 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 121842531 121842531 CCDC62 12 G G A 45 TMEM132B 114795 broad.mit.edu 36 12 124570120 124570120 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 124570120 124570120 TMEM132B 12 C C T 26 POSTN 10631 broad.mit.edu 36 13 37054560 37054560 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 37054560 37054560 POSTN 13 G G A 40 DHRS2 10202 broad.mit.edu 36 14 23178002 23178002 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 23178002 23178002 DHRS2 14 G G A 35 SIX4 51804 broad.mit.edu 36 14 60256912 60256912 + Missense_Mutation SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 60256912 60256912 SIX4 14 A A C 10 GALNTL1 57452 broad.mit.edu 36 14 68878199 68878199 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 68878199 68878199 GALNTL1 14 C C T 30 SPTBN5 51332 broad.mit.edu 36 15 39965754 39965754 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 39965754 39965754 SPTBN5 15 C C G 26 TMOD3 29766 broad.mit.edu 36 15 49968619 49968619 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 49968619 49968619 TMOD3 15 C C G 21 RNF111 54778 broad.mit.edu 36 15 57170618 57170618 + Missense_Mutation SNP A A T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 57170618 57170618 RNF111 15 A A T 12 IGF1R 3480 broad.mit.edu 36 15 97290401 97290401 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 C A C C Unknown Valid Somatic x x Sequenom_PCR_WGA x Broad Missense_Mutation SNP 97290401 97290401 IGF1R 15 C C A 30 JMJD8 339123 broad.mit.edu 36 16 673195 673195 + Silent SNP C C A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 673195 673195 JMJD8 16 C C A 18 XPO6 23214 broad.mit.edu 36 16 28023443 28023443 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 28023443 28023443 XPO6 16 G G A 39 SLC5A2 6524 broad.mit.edu 36 16 31407219 31407219 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 31407219 31407219 SLC5A2 16 G G A 40 TP53 7157 broad.mit.edu 36 17 7518284 7518284 + Missense_Mutation SNP G G A rs28934573 Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 7518284 7518284 TP53 17 G G A 41 RAPGEFL1 51195 broad.mit.edu 36 17 35602762 35602762 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 35602762 35602762 RAPGEFL1 17 G G A 33 MC5R 4161 broad.mit.edu 36 18 13815845 13815845 + Missense_Mutation SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 13815845 13815845 MC5R 18 A A C 1 LIPG 9388 broad.mit.edu 36 18 45345834 45345834 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 45345834 45345834 LIPG 18 G G A 34 TNFSF14 8740 broad.mit.edu 36 19 6616098 6616098 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 6616098 6616098 TNFSF14 19 C C T 23 UNC13A 23025 broad.mit.edu 36 19 17617817 17617817 + Silent SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 17617817 17617817 UNC13A 19 A A G 8 ZNF570 148268 broad.mit.edu 36 19 42667854 42667854 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 42667854 42667854 ZNF570 19 C C T 22 CYP2A7 1549 broad.mit.edu 36 19 46075089 46075089 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 46075089 46075089 CYP2A7 19 C C G 26 ZC3H4 23211 broad.mit.edu 36 19 52262393 52262393 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 52262393 52262393 ZC3H4 19 T T C 56 ZNF547 284306 broad.mit.edu 36 19 62580982 62580982 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 62580982 62580982 ZNF547 19 T T G 60 TSGA10 80705 broad.mit.edu 36 2 99054746 99054746 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 99054746 99054746 TSGA10 2 A A G 6 GLI2 2736 broad.mit.edu 36 2 121464405 121464405 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 121464405 121464405 GLI2 2 G G T 34 NCKAP5 344148 broad.mit.edu 36 2 133258686 133258686 + Missense_Mutation SNP C C G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 133258686 133258686 NCKAP5 2 C C G 32 LCT 3938 broad.mit.edu 36 2 136281181 136281181 + Missense_Mutation SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 136281181 136281181 LCT 2 G G A 33 RBM45 129831 broad.mit.edu 36 2 178691042 178691042 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 178691042 178691042 RBM45 2 C C T 31 RBM44 375316 broad.mit.edu 36 2 238387025 238387025 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 238387025 238387025 RBM44 2 G G C 47 PLCB4 5332 broad.mit.edu 36 20 9294157 9294157 + Silent SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 9294157 9294157 PLCB4 20 A A C 15 JAG1 182 broad.mit.edu 36 20 10570147 10570147 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 10570147 10570147 JAG1 20 C C T 31 PCSK2 5126 broad.mit.edu 36 20 17382520 17382520 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 17382520 17382520 PCSK2 20 C C T 20 SUN2 25777 broad.mit.edu 36 22 37475757 37475757 + Missense_Mutation SNP T T G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 37475757 37475757 SUN2 22 T T G 58 HHATL 57467 broad.mit.edu 36 3 42714831 42714831 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 42714831 42714831 HHATL 3 C C T 26 ATRIP 84126 broad.mit.edu 36 3 48476710 48476710 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 48476710 48476710 ATRIP 3 A A G 8 ZMYND10 51364 broad.mit.edu 36 3 50357653 50357653 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 50357653 50357653 ZMYND10 3 T T C 51 APOD 347 broad.mit.edu 36 3 196777115 196777115 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 196777115 196777115 APOD 3 A A G 4 JAKMIP1 152789 broad.mit.edu 36 4 6137542 6137542 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 6137542 6137542 JAKMIP1 4 C C T 29 LARP7 51574 broad.mit.edu 36 4 113791076 113791076 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 113791076 113791076 LARP7 4 G G A 43 RNF150 57484 broad.mit.edu 36 4 142108464 142108464 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 142108464 142108464 RNF150 4 G G A 37 MAST4 375449 broad.mit.edu 36 5 66120331 66120331 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 66120331 66120331 MAST4 5 C C T 27 LMNB1 4001 broad.mit.edu 36 5 126196373 126196373 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 126196373 126196373 LMNB1 5 A A G 9 WDR55 54853 broad.mit.edu 36 5 140024686 140024686 + Missense_Mutation SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 140024686 140024686 WDR55 5 A A C 10 FAT2 2196 broad.mit.edu 36 5 150902687 150902687 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 150902687 150902687 FAT2 5 G G C 44 EHMT2 10919 broad.mit.edu 36 6 31963609 31963609 + Silent SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 31963609 31963609 EHMT2 6 A A C 1 ABCC10 89845 broad.mit.edu 36 6 43520953 43520953 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 43520953 43520953 ABCC10 6 C C T 23 C6orf174 387104 broad.mit.edu 36 6 127838893 127838893 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 127838893 127838893 C6orf174 6 C C T 28 PHACTR2 9749 broad.mit.edu 36 6 144128261 144128261 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 144128261 144128261 PHACTR2 6 C C T 29 MACC1 346389 broad.mit.edu 36 7 20164423 20164423 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 20164423 20164423 MACC1 7 C C T 17 HERPUD2 64224 broad.mit.edu 36 7 35676413 35676413 + Silent SNP G G C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 35676413 35676413 HERPUD2 7 G G C 47 LOXL2 4017 broad.mit.edu 36 8 23281726 23281726 + Missense_Mutation SNP G G T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 23281726 23281726 LOXL2 8 G G T 48 RIMS2 9699 broad.mit.edu 36 8 105012785 105012785 + Missense_Mutation SNP T T C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 105012785 105012785 RIMS2 8 T T C 56 EXT1 2131 broad.mit.edu 36 8 119192014 119192014 + Silent SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 119192014 119192014 EXT1 8 C C T 19 ZNF572 137209 broad.mit.edu 36 8 126058941 126058941 + Missense_Mutation SNP G G C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 126058941 126058941 ZNF572 8 G G C 46 COL22A1 169044 broad.mit.edu 36 8 139959299 139959299 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 139959299 139959299 COL22A1 8 G G A 38 SLC45A4 57210 broad.mit.edu 36 8 142296426 142296426 + Silent SNP G G A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 142296426 142296426 SLC45A4 8 G G A 45 BAI1 575 broad.mit.edu 36 8 143567763 143567763 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 143567763 143567763 BAI1 8 C C T 27 HAUS6 54801 broad.mit.edu 36 9 19048102 19048102 + Missense_Mutation SNP T T A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 19048102 19048102 HAUS6 9 T T A 51 TMC1 117531 broad.mit.edu 36 9 74625673 74625673 + Missense_Mutation SNP A A G novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 74625673 74625673 TMC1 9 A A G 4 OR13C8 138802 broad.mit.edu 36 9 106372007 106372007 + Silent SNP A A C novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Silent SNP 106372007 106372007 OR13C8 9 A A C 7 CCNB3 85417 broad.mit.edu 36 X 50068991 50068991 + Missense_Mutation SNP C C T novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 50068991 50068991 CCNB3 23 C C T 30 NOX1 27035 broad.mit.edu 36 X 100003844 100003844 + Missense_Mutation SNP C C A novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown x x --- x Broad Missense_Mutation SNP 100003844 100003844 NOX1 23 C C A 27 FAM19A3 284467 broad.mit.edu 36 1 113067209 113067232 + In_Frame_Del DEL GCAACCGGAACCGCATCGAGGAGC - GCAACCGGAACCGCATCGAGGAGC novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown Phase_I Capture --- Illumina GAIIx Broad In_Frame_Del DEL 113067209 113067232 FAM19A3 1 GCAACCGGAACCGCATCGAGGAGC - GCAACCGGAACCGCATCGAGGAGC 46 TWSG1 57045 broad.mit.edu 36 18 9386353 9386368 + Frame_Shift_Del DEL TCCCTTCTCTCTTCCG - TCCCTTCTCTCTTCCG novel Unknown TCGA-20-0991-01 TCGA-20-0991-10 Unknown Unknown Unknown Phase_I Capture --- Illumina GAIIx Broad Frame_Shift_Del DEL 9386353 9386368 TWSG1 18 TCCCTTCTCTCTTCCG - TCCCTTCTCTCTTCCG 50