Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
GEMIN4	50628	genome.wustl.edu	36	17	595930	595930	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	595930	595930	GEMIN4	17	C	C	G	17
RGS12	6002	genome.wustl.edu	36	4	3400208	3400208	+	Silent	SNP	T	C	C	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	3400208	3400208	RGS12	4	T	C	C	50
TP53	7157	genome.wustl.edu	36	17	7518990	7518990	+	Missense_Mutation	SNP	A	T	T	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	A	A	T	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7518990	7518990	TP53	17	A	T	T	12
CDH12	1010	genome.wustl.edu	36	5	22011192	22011192	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	22011192	22011192	CDH12	5	G	G	A	38
OR5R1	219479	genome.wustl.edu	36	11	55941420	55941420	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55941420	55941420	OR5R1	11	T	T	A	52
ERC2	26059	genome.wustl.edu	36	3	56001130	56001130	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	56001130	56001130	ERC2	3	C	C	G	21
CYB561	1534	genome.wustl.edu	36	17	58868567	58868567	+	Missense_Mutation	SNP	A	C	C	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	A	A	C	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	58868567	58868567	CYB561	17	A	C	C	7
MS4A10	341116	genome.wustl.edu	36	11	60316331	60316331	+	Silent	SNP	C	A	A	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	60316331	60316331	MS4A10	11	C	A	A	32
PRKRIR	5612	genome.wustl.edu	36	11	75739612	75739612	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75739612	75739612	PRKRIR	11	A	A	G	15
SEMA4D	10507	genome.wustl.edu	36	9	91193779	91193779	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	91193779	91193779	SEMA4D	9	C	C	T	30
EPHA7	2045	genome.wustl.edu	36	6	94177476	94177476	+	Missense_Mutation	SNP	A	G	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	94177476	94177476	EPHA7	6	A	G	G	1
MUC3B	57876	genome.wustl.edu	36	7	100390002	100390002	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	100390002	100390002	MUC3B	7	G	G	T	33
CEP97	79598	genome.wustl.edu	36	3	102957073	102957073	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102957073	102957073	CEP97	3	C	C	G	20
OVGP1	5016	genome.wustl.edu	36	1	111759162	111759162	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	111759162	111759162	OVGP1	1	G	A	A	44
NRAP	4892	genome.wustl.edu	36	10	115402747	115402747	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	115402747	115402747	NRAP	10	G	G	T	34
STK10	6793	genome.wustl.edu	36	5	171516300	171516300	+	Missense_Mutation	SNP	A	G	G	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	171516300	171516300	STK10	5	A	G	G	7
ATIC	471	genome.wustl.edu	36	2	215911798	215911798	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1428-01	TCGA-24-1428-10	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	215911798	215911798	ATIC	2	C	C	T	32