Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context COLEC12 81035 genome.wustl.edu 36 18 336824 336824 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 336824 336824 COLEC12 18 C C G 32 LARP4B 23185 genome.wustl.edu 36 10 865530 865530 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 865530 865530 LARP4B 10 C C T 23 PRPF8 10594 genome.wustl.edu 36 17 1525263 1525263 + Missense_Mutation SNP C G G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 1525263 1525263 PRPF8 17 C G G 27 TGM3 7053 genome.wustl.edu 36 20 2268522 2268522 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2268522 2268522 TGM3 20 G G A 39 FAM193A 8603 genome.wustl.edu 36 4 2668058 2668058 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 2668058 2668058 FAM193A 4 C C T 23 OR3A4 390756 genome.wustl.edu 36 17 3160859 3160859 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3160859 3160859 OR3A4 17 C C G 32 ADCY9 115 genome.wustl.edu 36 16 3997506 3997506 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3997506 3997506 ADCY9 16 C C A 17 BHLHE40 8553 genome.wustl.edu 36 3 5000108 5000108 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 5000108 5000108 BHLHE40 3 C C G 26 CLDN7 1366 genome.wustl.edu 36 17 7104913 7104913 + Silent SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 7104913 7104913 CLDN7 17 C C A 29 C19orf45 374877 genome.wustl.edu 36 19 7476999 7476999 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 7476999 7476999 C19orf45 19 G G A 33 C19orf45 374877 genome.wustl.edu 36 19 7477020 7477020 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 7477020 7477020 C19orf45 19 G G A 46 TP53 7157 genome.wustl.edu 36 17 7518990 7518990 + Missense_Mutation SNP A G G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A G G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 7518990 7518990 TP53 17 A G G 12 STXBP2 6813 genome.wustl.edu 36 19 7611910 7611910 + Silent SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 7611910 7611910 STXBP2 19 G G T 47 ENO1 2023 genome.wustl.edu 36 1 8849058 8849058 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 8849058 8849058 ENO1 1 G G A 45 MYH1 4619 genome.wustl.edu 36 17 10345698 10345698 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 10345698 10345698 MYH1 17 T T C 56 SYCP2L 221711 genome.wustl.edu 36 6 11006314 11006314 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 11006314 11006314 SYCP2L 6 G G C 33 GNAL 2774 genome.wustl.edu 36 18 11870995 11870995 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 11870995 11870995 GNAL 18 G G C 34 ENSG00000205940 genome.wustl.edu 36 4 12948665 12948665 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 12948665 12948665 ENSG00000205940 4 G G T 33 LOC728138 728138 genome.wustl.edu 36 16 14990025 14990025 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 14990025 14990025 LOC728138 16 C C T 23 ASB11 140456 genome.wustl.edu 36 X 15216001 15216001 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 15216001 15216001 ASB11 23 C C G 32 SPEN 23013 genome.wustl.edu 36 1 16075631 16075631 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 16075631 16075631 SPEN 1 G G C 33 DGCR14 8220 genome.wustl.edu 36 22 17507498 17507498 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17507498 17507498 DGCR14 22 C C A 28 MSGN1 343930 genome.wustl.edu 36 2 17861525 17861525 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 17861525 17861525 MSGN1 2 G G A 42 LOC283523 283523 genome.wustl.edu 36 13 18153787 18153787 + Nonsense_Mutation SNP A A T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 18153787 18153787 LOC283523 13 A A T 1 CACNB2 783 genome.wustl.edu 36 10 18827469 18827469 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18827469 18827469 CACNB2 10 T T A 62 UBR4 23352 genome.wustl.edu 36 1 19314710 19314710 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19314710 19314710 UBR4 1 C C A 27 KIAA0090 23065 genome.wustl.edu 36 1 19438993 19438993 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 19438993 19438993 KIAA0090 1 G G A 41 OR4N4 283694 genome.wustl.edu 36 15 19884234 19884234 + Nonsense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 19884234 19884234 OR4N4 15 C C A 29 METT11D1 64745 genome.wustl.edu 36 14 20534531 20534531 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 20534531 20534531 METT11D1 14 G G A 33 SLC17A6 57084 genome.wustl.edu 36 11 22337568 22337569 + Missense DNP CC CC AT novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 CC CC CC AT CC CC Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense DNP 22337568 22337569 SLC17A6 11 CC CC AT 22 SACS 26278 genome.wustl.edu 36 13 22811133 22811133 + Nonsense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 22811133 22811133 SACS 13 G G A 45 IGF2BP3 10643 genome.wustl.edu 36 7 23349916 23349916 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 23349916 23349916 IGF2BP3 7 C C T 24 LOC100128853 genome.wustl.edu 36 19 23467522 23467522 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23467522 23467522 LOC100128853 19 C C A 28 PIWIL3 440822 genome.wustl.edu 36 22 23488369 23488369 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23488369 23488369 PIWIL3 22 G G C 34 NINL 22981 genome.wustl.edu 36 20 25432690 25432690 + Silent SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 25432690 25432690 NINL 20 C C A 29 HERC2 8924 genome.wustl.edu 36 15 26132886 26132886 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 26132886 26132886 HERC2 15 G G A 45 DSG2 1829 genome.wustl.edu 36 18 27370347 27370347 + Missense_Mutation SNP A A T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27370347 27370347 DSG2 18 A A T 2 HIST1H2BO 8348 genome.wustl.edu 36 6 27969325 27969325 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 27969325 27969325 HIST1H2BO 6 G G A 33 PGBD1 84547 genome.wustl.edu 36 6 28377695 28377695 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 28377695 28377695 PGBD1 6 C C T 29 B3GALTL 145173 genome.wustl.edu 36 13 30758859 30758859 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 30758859 30758859 B3GALTL 13 C C T 29 FBXO7 25793 genome.wustl.edu 36 22 31211059 31211059 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31211059 31211059 FBXO7 22 C C T 18 PUM1 9698 genome.wustl.edu 36 1 31211533 31211533 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31211533 31211533 PUM1 1 T T C 54 DNM1L 10059 genome.wustl.edu 36 12 32775673 32775673 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 32775673 32775673 DNM1L 12 G G T 46 RBM12 10137 genome.wustl.edu 36 20 33705476 33705476 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 33705476 33705476 RBM12 20 T T C 49 GJB4 127534 genome.wustl.edu 36 1 35000167 35000167 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35000167 35000167 GJB4 1 G G T 41 CTNNBL1 56259 genome.wustl.edu 36 20 35904173 35904173 + Silent SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 35904173 35904173 CTNNBL1 20 T T C 60 TSHZ3 57616 genome.wustl.edu 36 19 36461226 36461226 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 36461226 36461226 TSHZ3 19 A A G 7 KRT14 3861 genome.wustl.edu 36 17 36993338 36993338 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 36993338 36993338 KRT14 17 C C T 28 OTC 5009 genome.wustl.edu 36 X 38096920 38096920 + Missense_Mutation SNP A A T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38096920 38096920 OTC 23 A A T 13 EZH1 2145 genome.wustl.edu 36 17 38108443 38108443 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38108443 38108443 EZH1 17 C C T 31 LOC100128525 genome.wustl.edu 36 22 38601808 38601808 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38601808 38601808 LOC100128525 22 G G C 36 TOP1 7150 genome.wustl.edu 36 20 39139642 39139642 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 39139642 39139642 TOP1 20 G G T 34 TREML2 79865 genome.wustl.edu 36 6 41276717 41276717 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 41276717 41276717 TREML2 6 G G A 47 ZNF345 25850 genome.wustl.edu 36 19 42059828 42059828 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42059828 42059828 ZNF345 19 G G A 47 GRXCR1 389207 genome.wustl.edu 36 4 42590045 42590045 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 42590045 42590045 GRXCR1 4 T T A 56 FCGBP 8857 genome.wustl.edu 36 19 45125384 45125384 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45125384 45125384 FCGBP 19 A A G 7 CYP2A6 1548 genome.wustl.edu 36 19 46048154 46048154 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46048154 46048154 CYP2A6 19 C C T 25 ENPP4 22875 genome.wustl.edu 36 6 46215774 46215774 + Silent SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 46215774 46215774 ENPP4 6 T T C 49 DIP2A 23181 genome.wustl.edu 36 21 46748734 46748734 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46748734 46748734 DIP2A 21 G G A 43 PSG3 5671 genome.wustl.edu 36 19 47929004 47929004 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47929004 47929004 PSG3 19 C C T 30 RB1 5925 genome.wustl.edu 36 13 47937211 47937211 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47937211 47937211 RB1 13 G G C 33 ZNF45 7596 genome.wustl.edu 36 19 49114870 49114870 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49114870 49114870 ZNF45 19 T T C 60 SOS2 6655 genome.wustl.edu 36 14 49693585 49693585 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49693585 49693585 SOS2 14 C C G 29 KRT2 3849 genome.wustl.edu 36 12 51325292 51325292 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 51325292 51325292 KRT2 12 G G A 38 PKHD1 5314 genome.wustl.edu 36 6 51840792 51840792 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 51840792 51840792 PKHD1 6 C C A 25 C5AR1 728 genome.wustl.edu 36 19 52514960 52514960 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 52514960 52514960 C5AR1 19 C C T 20 RB1CC1 9821 genome.wustl.edu 36 8 53749201 53749201 + Silent SNP A A C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 53749201 53749201 RB1CC1 8 A A C 3 PSME4 23198 genome.wustl.edu 36 2 53975704 53975704 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 53975704 53975704 PSME4 2 A A C 13 IL6ST 3572 genome.wustl.edu 36 5 55294991 55294991 + Silent SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 55294991 55294991 IL6ST 5 T T A 61 HMGCLL1 54511 genome.wustl.edu 36 6 55486876 55486876 + Silent SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 55486876 55486876 HMGCLL1 6 G G T 47 DST 667 genome.wustl.edu 36 6 56577184 56577184 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 56577184 56577184 DST 6 C C T 29 SIGLEC12 89858 genome.wustl.edu 36 19 56696534 56696534 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 56696534 56696534 SIGLEC12 19 G G A 36 OR10Q1 219960 genome.wustl.edu 36 11 57752201 57752201 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 57752201 57752201 OR10Q1 11 C C T 22 KIR2DL3 3804 genome.wustl.edu 36 19 59941855 59941855 + Silent SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 59941855 59941855 KIR2DL3 19 T T A 63 KIR2DL1 3802 genome.wustl.edu 36 19 59993361 59993361 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 59993361 59993361 KIR2DL1 19 C C G 30 TPD52L2 7165 genome.wustl.edu 36 20 61977628 61977628 + Silent SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 61977628 61977628 TPD52L2 20 T T A 55 LPHN3 23284 genome.wustl.edu 36 4 62496566 62496566 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62496566 62496566 LPHN3 4 C C G 20 ASPH 444 genome.wustl.edu 36 8 62718502 62718502 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 62718502 62718502 ASPH 8 T T G 57 BPTF 2186 genome.wustl.edu 36 17 63351149 63351150 + Missense_Mutation DNP AG AG CC novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 AG AG Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation DNP 63351149 63351150 BPTF 17 AG AG CC 7 MZF1 7593 genome.wustl.edu 36 19 63774194 63774194 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 63774194 63774194 MZF1 19 C C T 28 HEPH 9843 genome.wustl.edu 36 X 65326359 65326359 + Missense_Mutation SNP C T T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 65326359 65326359 HEPH 23 C T T 25 PCDH9 5101 genome.wustl.edu 36 13 66103459 66103459 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 66103459 66103459 PCDH9 13 C C T 18 MPP5 64398 genome.wustl.edu 36 14 66860274 66860274 + Missense_Mutation SNP A A T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 66860274 66860274 MPP5 14 A A T 9 ANTXR1 84168 genome.wustl.edu 36 2 69158056 69158056 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 69158056 69158056 ANTXR1 2 G G A 46 CD300LB 124599 genome.wustl.edu 36 17 70039181 70039181 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70039181 70039181 CD300LB 17 G G C 46 LRRC7 57554 genome.wustl.edu 36 1 70277021 70277021 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70277021 70277021 LRRC7 1 G G C 33 DDX21 9188 genome.wustl.edu 36 10 70391886 70391886 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 70391886 70391886 DDX21 10 C C A 30 ZNF516 9658 genome.wustl.edu 36 18 72220900 72220900 + Missense_Mutation SNP C G G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C G G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72220900 72220900 ZNF516 18 C G G 21 ALMS1 7840 genome.wustl.edu 36 2 73530388 73530388 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 73530388 73530388 ALMS1 2 G G A 36 HEXB 3074 genome.wustl.edu 36 5 74050387 74050387 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74050387 74050387 HEXB 5 G G C 43 USP54 159195 genome.wustl.edu 36 10 74972831 74972831 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74972831 74972831 USP54 10 G G A 42 MAGEE1 57692 genome.wustl.edu 36 X 75566885 75566885 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75566885 75566885 MAGEE1 23 G G C 33 F2RL2 2151 genome.wustl.edu 36 5 75954796 75954796 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75954796 75954796 F2RL2 5 A A C 3 ACADM 34 genome.wustl.edu 36 1 75978367 75978367 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 75978367 75978367 ACADM 1 G G A 39 P2RY10 27334 genome.wustl.edu 36 X 78103370 78103370 + Missense_Mutation SNP C A A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C A A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 78103370 78103370 P2RY10 23 C A A 21 PPP1R12A 4659 genome.wustl.edu 36 12 78740067 78740067 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 78740067 78740067 PPP1R12A 12 A A G 4 FRAS1 80144 genome.wustl.edu 36 4 79377709 79377709 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 79377709 79377709 FRAS1 4 G G A 37 SV2B 9899 genome.wustl.edu 36 15 89570923 89570923 + Silent SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 89570923 89570923 SV2B 15 G G C 48 TTC7B 145567 genome.wustl.edu 36 14 90266244 90266244 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 90266244 90266244 TTC7B 14 G G T 43 MDN1 23195 genome.wustl.edu 36 6 90428566 90428566 + Silent SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 90428566 90428566 MDN1 6 A A G 6 SMEK1 55671 genome.wustl.edu 36 14 91001386 91001386 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 91001386 91001386 SMEK1 14 C C A 29 SAMD9 54809 genome.wustl.edu 36 7 92570228 92570228 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 92570228 92570228 SAMD9 7 C C A 27 MAML2 84441 genome.wustl.edu 36 11 95351789 95351789 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 95351789 95351789 MAML2 11 G G A 33 SORBS1 10580 genome.wustl.edu 36 10 97125762 97125762 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 97125762 97125762 SORBS1 10 T T A 60 TRRAP 8295 genome.wustl.edu 36 7 98391707 98391707 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 98391707 98391707 TRRAP 7 G G A 48 KRT18P13 392371 genome.wustl.edu 36 9 99501544 99501544 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 99501544 99501544 KRT18P13 9 C C T 27 AZGP1P2 401393 genome.wustl.edu 36 7 100717601 100717601 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100717601 100717601 AZGP1P2 7 A A G 8 COL15A1 1306 genome.wustl.edu 36 9 100807102 100807102 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 100807102 100807102 COL15A1 9 G G A 43 SIM1 6492 genome.wustl.edu 36 6 100945522 100945522 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 100945522 100945522 SIM1 6 C C G 32 BIRC3 330 genome.wustl.edu 36 11 101700819 101700819 + Silent SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 101700819 101700819 BIRC3 11 A A G 8 DYNC2H1 79659 genome.wustl.edu 36 11 102580816 102580816 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 102580816 102580816 DYNC2H1 11 C C T 29 POLR3B 55703 genome.wustl.edu 36 12 105281792 105281792 + Silent SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 105281792 105281792 POLR3B 12 G G T 46 CCDC138 165055 genome.wustl.edu 36 2 108798892 108798892 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 108798892 108798892 CCDC138 2 C C G 29 PAK3 5063 genome.wustl.edu 36 X 110253133 110253133 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 110253133 110253133 PAK3 23 G G T 38 PTPN3 5774 genome.wustl.edu 36 9 111208622 111208622 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111208622 111208622 PTPN3 9 A A C 9 ADORA3 140 genome.wustl.edu 36 1 111844530 111844530 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 111844530 111844530 ADORA3 1 C C A 21 PPP1R3A 5506 genome.wustl.edu 36 7 113345820 113345820 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 113345820 113345820 PPP1R3A 7 T T A 53 UGCG 7357 genome.wustl.edu 36 9 113731768 113731768 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 113731768 113731768 UGCG 9 G G A 37 FRK 2444 genome.wustl.edu 36 6 116431838 116431838 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 116431838 116431838 FRK 6 T T C 52 CIT 11113 genome.wustl.edu 36 12 118695044 118695044 + Silent SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 118695044 118695044 CIT 12 T T C 63 OR1N2 138882 genome.wustl.edu 36 9 124355406 124355406 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 124355406 124355406 OR1N2 9 G G C 42 FAT4 79633 genome.wustl.edu 36 4 126549081 126549081 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 126549081 126549081 FAT4 4 G G A 45 RBM28 55131 genome.wustl.edu 36 7 127740546 127740546 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 127740546 127740546 RBM28 7 T T C 64 MYB 4602 genome.wustl.edu 36 6 135563199 135563199 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 135563199 135563199 MYB 6 G G C 45 CEP63 80254 genome.wustl.edu 36 3 135738746 135738746 + Silent SNP A A T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 135738746 135738746 CEP63 3 A A T 16 CHRM2 1129 genome.wustl.edu 36 7 136350196 136350196 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 136350196 136350196 CHRM2 7 C C G 17 CHRM2 1129 genome.wustl.edu 36 7 136351313 136351313 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 136351313 136351313 CHRM2 7 G G T 41 STAG1 10274 genome.wustl.edu 36 3 137550738 137550738 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 137550738 137550738 STAG1 3 C C G 20 PCDHA5 56143 genome.wustl.edu 36 5 140182735 140182735 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 140182735 140182735 PCDHA5 5 G G A 48 HDAC3 8841 genome.wustl.edu 36 5 140989008 140989008 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 140989008 140989008 HDAC3 5 C C G 23 SPRY4 81848 genome.wustl.edu 36 5 141674769 141674769 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 141674769 141674769 SPRY4 5 C C A 23 PDGFRB 5159 genome.wustl.edu 36 5 149480685 149480685 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 149480685 149480685 PDGFRB 5 G G C 37 NUP210L 91181 genome.wustl.edu 36 1 152394025 152394025 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 152394025 152394025 NUP210L 1 G G A 40 G6PD 2539 genome.wustl.edu 36 X 153415852 153415852 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 153415852 153415852 G6PD 23 G G A 33 MPP1 4354 genome.wustl.edu 36 X 153665519 153665519 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 153665519 153665519 MPP1 23 C C G 32 SPTA1 6708 genome.wustl.edu 36 1 156904273 156904273 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 156904273 156904273 SPTA1 1 T T G 56 ATF6 22926 genome.wustl.edu 36 1 160088228 160088228 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 160088228 160088228 ATF6 1 T T C 52 FAP 2191 genome.wustl.edu 36 2 162782770 162782770 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 162782770 162782770 FAP 2 G G A 35 FASTKD1 79675 genome.wustl.edu 36 2 170102046 170102046 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 170102046 170102046 FASTKD1 2 C C T 32 FAM5B 57795 genome.wustl.edu 36 1 175512137 175512137 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 175512137 175512137 FAM5B 1 G G C 34 PDE11A 50940 genome.wustl.edu 36 2 178202430 178202430 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 178202430 178202430 PDE11A 2 G G T 42 TTN 7273 genome.wustl.edu 36 2 179133251 179133251 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 179133251 179133251 TTN 2 T T G 50 TTN 7273 genome.wustl.edu 36 2 179205590 179205590 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 179205590 179205590 TTN 2 G G A 45 RNASEL 6041 genome.wustl.edu 36 1 180812026 180812026 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 180812026 180812026 RNASEL 1 T T C 62 WWC2 80014 genome.wustl.edu 36 4 184403640 184403640 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 184403640 184403640 WWC2 4 C C T 32 PLA2G4A 5321 genome.wustl.edu 36 1 185186473 185186473 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 185186473 185186473 PLA2G4A 1 C C G 19 EIF2B5 8893 genome.wustl.edu 36 3 185340583 185340583 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 185340583 185340583 EIF2B5 3 A A G 5 FAT1 2195 genome.wustl.edu 36 4 187776058 187776058 + Silent SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 187776058 187776058 FAT1 4 A A G 8 LOC642892 642892 genome.wustl.edu 36 3 197747883 197747883 + Silent SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 197747883 197747883 LOC642892 3 C C T 19 ALS2CR8 79800 genome.wustl.edu 36 2 203515797 203515797 + Silent SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 203515797 203515797 ALS2CR8 2 T T C 52 MAP2 4133 genome.wustl.edu 36 2 210267017 210267017 + Silent SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 210267017 210267017 MAP2 2 C C G 22 ABCA12 26154 genome.wustl.edu 36 2 215570674 215570674 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 215570674 215570674 ABCA12 2 C C G 23 SPEG 10290 genome.wustl.edu 36 2 220017706 220017706 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 220017706 220017706 SPEG 2 C C T 19 SPHKAP 80309 genome.wustl.edu 36 2 228592495 228592495 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 228592495 228592495 SPHKAP 2 A A G 2 TRIP12 9320 genome.wustl.edu 36 2 230358756 230358756 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 230358756 230358756 TRIP12 2 G G A 46 C1orf57 84284 genome.wustl.edu 36 1 231180580 231180580 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 231180580 231180580 C1orf57 1 G G A 40 ALPP 250 genome.wustl.edu 36 2 232951766 232951766 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 232951766 232951766 ALPP 2 C C T 26 COL6A3 1293 genome.wustl.edu 36 2 237942408 237942408 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 237942408 237942408 COL6A3 2 C C A 20 UBE2K 3093 genome.wustl.edu 36 4 39423776 39423780 + Frame_Shift_Del DEL ACCAA ACCAA - novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 ACCAA ACCAA ACCAA - ACCAA ACCAA Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 39423776 39423780 UBE2K 4 ACCAA ACCAA - 14 C1orf107 27042 genome.wustl.edu 36 1 208070891 208070893 + In_Frame_Del DEL GAG GAG - novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 GAG GAG GAG - GAG GAG Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU In_Frame_Del DEL 208070891 208070893 C1orf107 1 GAG GAG - 45 PKHD1 5314 genome.wustl.edu 36 6 51990356 51990356 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C T C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA dbGAP Illumina GAIIx WashU Missense_Mutation SNP 51990356 51990356 PKHD1 6 C C T 19 NXT1 29107 genome.wustl.edu 36 20 23282730 23282730 + Missense_Mutation SNP G A G novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G A G G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23282730 23282730 NXT1 20 G A G 45 ADSSL1 122622 genome.wustl.edu 36 14 104282285 104282285 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 104282285 104282285 ADSSL1 14 T T A 64 ENSG00000214331 genome.wustl.edu 36 16 72943457 72943457 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 72943457 72943457 ENSG00000214331 16 T T C 56 DNAH17 8632 genome.wustl.edu 36 17 73999186 73999186 + Silent SNP G G A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 73999186 73999186 DNAH17 17 G G A 45 LGALS3BP 3959 genome.wustl.edu 36 17 74480227 74480227 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1469-01 TCGA-24-1469-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 74480227 74480227 LGALS3BP 17 C C A 30