Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer dataset type classification start end gene chr ref_allele tum_allele1 tum_allele2 context DHRSX 207063 genome.wustl.edu 36 X 2336807 2336807 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 2336807 2336807 DHRSX 23 C C T 32 RNASEH1 246243 genome.wustl.edu 36 2 3575858 3575858 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 3575858 3575858 RNASEH1 2 G G A 36 BTBD12 84464 genome.wustl.edu 36 16 3579356 3579356 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3579356 3579356 BTBD12 16 C C A 26 AKR1C1 1645 genome.wustl.edu 36 10 5004864 5004864 + Silent SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 5004864 5004864 AKR1C1 10 C C T 24 CRMP1 1400 genome.wustl.edu 36 4 5893964 5893964 + Silent SNP G A A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 5893964 5893964 CRMP1 4 G A A 39 ACADVL 37 genome.wustl.edu 36 17 7066241 7066241 + Silent SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 7066241 7066241 ACADVL 17 C C T 32 KIAA0802 23255 genome.wustl.edu 36 18 8809131 8809131 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 8809131 8809131 KIAA0802 18 G G A 34 USP7 7874 genome.wustl.edu 36 16 8898375 8898375 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 8898375 8898375 USP7 16 T T A 64 RNF182 221687 genome.wustl.edu 36 6 14086034 14086034 + Silent SNP T T C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 14086034 14086034 RNF182 6 T T C 64 ACTL8 81569 genome.wustl.edu 36 1 18025359 18025359 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18025359 18025359 ACTL8 1 C C A 24 IGSF22 283284 genome.wustl.edu 36 11 18699666 18699666 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 18699666 18699666 IGSF22 11 C C G 19 ABCC9 10060 genome.wustl.edu 36 12 21845258 21845258 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 21845258 21845258 ABCC9 12 C C T 27 ZNF98 148198 genome.wustl.edu 36 19 22366456 22366456 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 22366456 22366456 ZNF98 19 G G A 41 NAPB 63908 genome.wustl.edu 36 20 23308089 23308089 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23308089 23308089 NAPB 20 G G T 36 CDH10 1008 genome.wustl.edu 36 5 24547225 24547225 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C A C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 24547225 24547225 CDH10 5 C C A 30 SEZ6L 23544 genome.wustl.edu 36 22 25077080 25077080 + Silent SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 25077080 25077080 SEZ6L 22 C C T 28 NPVF 64111 genome.wustl.edu 36 7 25234538 25234538 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 25234538 25234538 NPVF 7 T T A 59 KIF3C 3797 genome.wustl.edu 36 2 26057663 26057663 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 26057663 26057663 KIF3C 2 T T G 62 GABBR1 2550 genome.wustl.edu 36 6 29696888 29696888 + Missense_Mutation SNP T T C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 29696888 29696888 GABBR1 6 T T C 52 MYST1 84148 genome.wustl.edu 36 16 31039052 31039052 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31039052 31039052 MYST1 16 C C G 23 MARCKSL1 65108 genome.wustl.edu 36 1 32572997 32572997 + Nonsense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 32572997 32572997 MARCKSL1 1 G G A 46 ADC 113451 genome.wustl.edu 36 1 33332896 33332896 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 33332896 33332896 ADC 1 G G C 45 B3GALT4 8705 genome.wustl.edu 36 6 33353260 33353260 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 33353260 33353260 B3GALT4 6 G G T 43 BAK1 578 genome.wustl.edu 36 6 33651640 33651640 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 33651640 33651640 BAK1 6 G G A 40 RALGAPA1 253959 genome.wustl.edu 36 14 35166288 35166288 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 35166288 35166288 RALGAPA1 14 C C T 21 APOBEC3D 140564 genome.wustl.edu 36 22 37757785 37757785 + Silent SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 37757785 37757785 APOBEC3D 22 C C T 23 TUBG1 7283 genome.wustl.edu 36 17 38017659 38017659 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 38017659 38017659 TUBG1 17 G G T 39 HIVEP3 59269 genome.wustl.edu 36 1 41820483 41820483 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 41820483 41820483 HIVEP3 1 A A G 12 ABCG1 9619 genome.wustl.edu 36 21 42583288 42583288 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 42583288 42583288 ABCG1 21 G G A 48 UBASH3A 53347 genome.wustl.edu 36 21 42711737 42711737 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 42711737 42711737 UBASH3A 21 G G A 39 ARID2 196528 genome.wustl.edu 36 12 44519445 44519445 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 44519445 44519445 ARID2 12 A A C 1 MED29 55588 genome.wustl.edu 36 19 44574065 44574065 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 44574065 44574065 MED29 19 G G C 37 SYT13 57586 genome.wustl.edu 36 11 45230638 45230638 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 45230638 45230638 SYT13 11 G G C 48 CCDC11 220136 genome.wustl.edu 36 18 46042428 46042428 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 46042428 46042428 CCDC11 18 T T A 55 PCNT 5116 genome.wustl.edu 36 21 46676267 46676267 + Nonsense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 46676267 46676267 PCNT 21 C C T 25 CPT1B 1375 genome.wustl.edu 36 22 49358237 49358237 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 49358237 49358237 CPT1B 22 C C T 29 C18orf54 162681 genome.wustl.edu 36 18 50143231 50143231 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 50143231 50143231 C18orf54 18 C C G 30 C2orf63 130162 genome.wustl.edu 36 2 55289342 55289342 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 55289342 55289342 C2orf63 2 C C G 24 PCDH15 65217 genome.wustl.edu 36 10 55625469 55625469 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 55625469 55625469 PCDH15 10 G G A 33 PENK 5179 genome.wustl.edu 36 8 57516417 57516417 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 57516417 57516417 PENK 8 C C G 30 PCDH20 64881 genome.wustl.edu 36 13 60884438 60884438 + Silent SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 60884438 60884438 PCDH20 13 G G T 39 RGNEF 64283 genome.wustl.edu 36 5 73178047 73178047 + Silent SNP A G G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A G G A A Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 73178047 73178047 RGNEF 5 A G G 14 C2orf78 388960 genome.wustl.edu 36 2 73896646 73896646 + Silent SNP A A G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 73896646 73896646 C2orf78 2 A A G 15 MYCBP2 23077 genome.wustl.edu 36 13 76652359 76652359 + Missense_Mutation SNP T G G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T G G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 76652359 76652359 MYCBP2 13 T G G 54 LPAR4 2846 genome.wustl.edu 36 X 77897941 77897941 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 77897941 77897941 LPAR4 23 G G T 45 PCLO 27445 genome.wustl.edu 36 7 82384027 82384027 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T A T T Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 82384027 82384027 PCLO 7 T T A 52 SMYD1 150572 genome.wustl.edu 36 2 88164998 88164998 + Silent SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 88164998 88164998 SMYD1 2 C C G 30 TRIP11 9321 genome.wustl.edu 36 14 91542437 91542437 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 91542437 91542437 TRIP11 14 G G A 36 TMEM131 23505 genome.wustl.edu 36 2 97758903 97758903 + Silent SNP T T C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T C T T Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 97758903 97758903 TMEM131 2 T T C 60 GPR128 84873 genome.wustl.edu 36 3 101851320 101851320 + Missense_Mutation SNP T T A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 101851320 101851320 GPR128 3 T T A 60 GPR22 2845 genome.wustl.edu 36 7 106901798 106901798 + Silent SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx WashU Silent SNP 106901798 106901798 GPR22 7 G G A 46 SH3RF3 344558 genome.wustl.edu 36 2 109330603 109330603 + Silent SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 109330603 109330603 SH3RF3 2 C C T 19 C7orf58 79974 genome.wustl.edu 36 7 120555707 120555707 + Silent SNP G G C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 120555707 120555707 C7orf58 7 G G C 48 HEG1 57493 genome.wustl.edu 36 3 126215523 126215523 + Silent SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 126215523 126215523 HEG1 3 G G T 37 SETX 23064 genome.wustl.edu 36 9 134211475 134211475 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 134211475 134211475 SETX 9 G G T 40 PCDHB10 56126 genome.wustl.edu 36 5 140554683 140554683 + Nonsense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Nonsense_Mutation SNP 140554683 140554683 PCDHB10 5 C C T 23 SETD7 80854 genome.wustl.edu 36 4 140652340 140652340 + Missense_Mutation SNP C C A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 140652340 140652340 SETD7 4 C C A 22 EPHA1 2041 genome.wustl.edu 36 7 142802352 142802352 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 142802352 142802352 EPHA1 7 A A G 7 INTS3 65123 genome.wustl.edu 36 1 152009314 152009314 + Missense_Mutation SNP G G C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152009314 152009314 INTS3 1 G G C 43 NUP210L 91181 genome.wustl.edu 36 1 152262372 152262372 + Missense_Mutation SNP A A T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 152262372 152262372 NUP210L 1 A A T 6 BCHE 590 genome.wustl.edu 36 3 167030102 167030102 + Missense_Mutation SNP A G G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A G G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 167030102 167030102 BCHE 3 A G G 4 FAM171B 165215 genome.wustl.edu 36 2 187335673 187335673 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 187335673 187335673 FAM171B 2 G G A 45 FAT1 2195 genome.wustl.edu 36 4 187867460 187867460 + Silent SNP G A A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Silent SNP 187867460 187867460 FAT1 4 G A A 38 FAM5C 339479 genome.wustl.edu 36 1 188470230 188470230 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 188470230 188470230 FAM5C 1 C C T 18 INPP1 3628 genome.wustl.edu 36 2 190942166 190942166 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 190942166 190942166 INPP1 2 G G T 47 SLC30A1 7779 genome.wustl.edu 36 1 209815995 209815995 + Missense_Mutation SNP A A C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 209815995 209815995 SLC30A1 1 A A C 5 ITPKB 3707 genome.wustl.edu 36 1 224990219 224990219 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 224990219 224990219 ITPKB 1 G G A 38 NLRP3 114548 genome.wustl.edu 36 1 245648896 245648896 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 245648896 245648896 NLRP3 1 C C G 31 TP53 7157 genome.wustl.edu 36 17 7518226 7518226 + Frame_Shift_Del DEL G G - novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G - G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 7518226 7518226 TP53 17 G G - 47 NF1 4763 genome.wustl.edu 36 17 26686014 26686032 + Frame_Shift_Del DEL ATGACTCCATGGCTGTCAA ATGACTCCATGGCTGTCAA - novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 ATGACTCCATGGCTGTCAA ATGACTCCATGGCTGTCAA ATGACTCCATGGCTGTCAA - ATGACTCCATGGCTGTCAA ATGACTCCATGGCTGTCAA Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 26686014 26686032 NF1 17 ATGACTCCATGGCTGTCAA ATGACTCCATGGCTGTCAA - 8 DLG5 9231 genome.wustl.edu 36 10 79271717 79271731 + In_Frame_Del DEL CAGCTCCACTTCGGT CAGCTCCACTTCGGT - novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 CAGCTCCACTTCGGT CAGCTCCACTTCGGT CAGCTCCACTTCGGT - CAGCTCCACTTCGGT CAGCTCCACTTCGGT Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU In_Frame_Del DEL 79271717 79271731 DLG5 10 CAGCTCCACTTCGGT CAGCTCCACTTCGGT - 21 BRCA1 672 genome.wustl.edu 36 17 38473195 38473198 + Frame_Shift_Del DEL GTTA GTTA - novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 GTTA - GTTA - GTTA - Unknown Valid Germline Phase_III Capture 454_PCR_WGA;Sanger_PCR_WGA dbGAP Illumina GAIIx WashU Frame_Shift_Del DEL 38473195 38473198 BRCA1 17 GTTA GTTA - 36 BAI2 576 genome.wustl.edu 36 1 31994579 31994579 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 31994579 31994579 BAI2 1 G G T 44 OR8H2 390151 genome.wustl.edu 36 11 55629539 55629539 + Missense_Mutation SNP T T G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 55629539 55629539 OR8H2 11 T T G 61 FGF23 8074 genome.wustl.edu 36 12 4349937 4349937 + Missense_Mutation SNP C C T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 4349937 4349937 FGF23 12 C C T 26 HEATR3 55027 genome.wustl.edu 36 16 48666996 48666996 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 48666996 48666996 HEATR3 16 G G T 33 ZNF91 7644 genome.wustl.edu 36 19 23337109 23337109 + Missense_Mutation SNP C C G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 23337109 23337109 ZNF91 19 C C G 32 TRANK1 9881 genome.wustl.edu 36 3 36872216 36872216 + Missense_Mutation SNP A A G novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 36872216 36872216 TRANK1 3 A A G 8 NBEAL2 23218 genome.wustl.edu 36 3 47025493 47025493 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 47025493 47025493 NBEAL2 3 G G A 42 DNAH5 1767 genome.wustl.edu 36 5 13860741 13860741 + Missense_Mutation SNP T C C novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 T T C C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 13860741 13860741 DNAH5 5 T C C 54 HIVEP1 3096 genome.wustl.edu 36 6 12230760 12230760 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 12230760 12230760 HIVEP1 6 G G A 47 MXRA5 25878 genome.wustl.edu 36 X 3251268 3251268 + Missense_Mutation SNP G G A novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 3251268 3251268 MXRA5 23 G G A 44 UBQLN2 29978 genome.wustl.edu 36 X 56607897 56607897 + Missense_Mutation SNP G G T novel Unknown TCGA-24-1470-01 TCGA-24-1470-10 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx WashU Missense_Mutation SNP 56607897 56607897 UBQLN2 23 G G T 44