Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PPP1R9A 55607 hgsc.bcm.edu 36 7 94578512 94578512 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_IV WXS SOLID SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TPO 7173 hgsc.bcm.edu 36 2 1486754 1486754 + Missense_Mutation SNP A A T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A T A A Unknown Valid Somatic Phase_IV WXS SOLID SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ACADVL 37 hgsc.bcm.edu 36 17 7068415 7068416 + In_Frame_Ins INS - - TCC novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ACBD4 79777 hgsc.bcm.edu 36 17 40570331 40570334 + Frame_Shift_Del DEL GGCA GGCA - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 GGCA GGCA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ADAM22 53616 hgsc.bcm.edu 36 7 87401725 87401725 + Silent SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ALOXE3 59344 hgsc.bcm.edu 36 17 7961899 7961899 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a AP3S1 1176 hgsc.bcm.edu 36 5 115258697 115258699 + In_Frame_Del DEL ATT ATT - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 ATT ATT . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a AVPR2 554 hgsc.bcm.edu 36 X 152824648 152824657 + Frame_Shift_Del DEL CCTTCTCGCT CCTTCTCGCT - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 CCTTCTCGCT CCTTCTCGCT . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a B4GALNT4 338707 hgsc.bcm.edu 36 11 370167 370167 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a BOC 91653 hgsc.bcm.edu 36 3 114484983 114484983 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a C19orf44 84167 hgsc.bcm.edu 36 19 16481461 16481463 + In_Frame_Del DEL AGC AGC - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 AGC AGC . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a C19orf6 91304 hgsc.bcm.edu 36 19 962130 962130 + Frame_Shift_Del DEL T T - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a C4A 720 hgsc.bcm.edu 36 6 32104549 32104549 + Missense_Mutation SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CACNA1F 778 hgsc.bcm.edu 36 X 48971729 48971729 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CCDC87 55231 hgsc.bcm.edu 36 11 66116013 66116014 + Frame_Shift_Del DEL CC CC - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 CC CC . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CHD4 1108 hgsc.bcm.edu 36 12 6575524 6575524 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CYP11B2 1585 hgsc.bcm.edu 36 8 143993485 143993485 + Frame_Shift_Del DEL T T - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a DLEC1 9940 hgsc.bcm.edu 36 3 38114134 38114134 + Splice_Site SNP T T A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FBXO25 26260 hgsc.bcm.edu 36 8 408740 408740 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FLG2 388698 hgsc.bcm.edu 36 1 150590163 150590163 + Silent SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FLNB 2317 hgsc.bcm.edu 36 3 58083926 58083926 + Missense_Mutation SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a GGA3 23163 hgsc.bcm.edu 36 17 70747108 70747108 + Nonsense_Mutation SNP T T A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a IL17RD 54756 hgsc.bcm.edu 36 3 57110354 57110354 + Frame_Shift_Del DEL G G - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a KIAA0430 9665 hgsc.bcm.edu 36 16 15637141 15637141 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a KIAA0430 9665 hgsc.bcm.edu 36 16 15637503 15637506 + Frame_Shift_Del DEL CATT CATT - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 CATT CATT . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a KTI12 112970 hgsc.bcm.edu 36 1 52271160 52271160 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a LDOC1L 84247 hgsc.bcm.edu 36 22 43271543 43271543 + Frame_Shift_Del DEL G G - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a LRP10 26020 hgsc.bcm.edu 36 14 22414700 22414700 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MCM3AP 8888 hgsc.bcm.edu 36 21 46487232 46487233 + Frame_Shift_Ins INS - - GG novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MGA 23269 hgsc.bcm.edu 36 15 39846076 39846076 + Missense_Mutation SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PCCB 5096 hgsc.bcm.edu 36 3 137531521 137531535 + In_Frame_Del DEL AACGTCCTTGGAGAA AACGTCCTTGGAGAA - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 AACGTCCTTGGAGAA AACGTCCTTGGAGAA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PHACTR1 221692 hgsc.bcm.edu 36 6 12857973 12857973 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PKN1 5585 hgsc.bcm.edu 36 19 14441799 14441799 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PTPRT 11122 hgsc.bcm.edu 36 20 40223576 40223588 + Frame_Shift_Del DEL GCTCCCCGCGGCT GCTCCCCGCGGCT - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 GCTCCCCGCGGCT GCTCCCCGCGGCT . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a SLC29A1 2030 hgsc.bcm.edu 36 6 44305329 44305329 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a SLC5A1 6523 hgsc.bcm.edu 36 22 30825226 30825226 + Nonsense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a STAB2 55576 hgsc.bcm.edu 36 12 102677123 102677123 + Missense_Mutation SNP T T G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a THADA 63892 hgsc.bcm.edu 36 2 43657867 43657867 + Missense_Mutation SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a THADA 63892 hgsc.bcm.edu 36 2 43657870 43657870 + Missense_Mutation SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TMPRSS3 64699 hgsc.bcm.edu 36 21 42676377 42676377 + Splice_Site SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TOM1 10043 hgsc.bcm.edu 36 22 34060380 34060380 + Missense_Mutation SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TRIM42 287015 hgsc.bcm.edu 36 3 141889473 141889473 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TYK2 7297 hgsc.bcm.edu 36 19 10337311 10337311 + Missense_Mutation SNP A A T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a USP49 25862 hgsc.bcm.edu 36 6 41881358 41881358 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a USP54 159195 hgsc.bcm.edu 36 10 74947312 74947312 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ADAMTS5 11096 hgsc.bcm.edu 36 21 27227082 27227082 + Silent SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ADCY4 196883 hgsc.bcm.edu 36 14 23857808 23857808 + Silent SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ADD1 118 hgsc.bcm.edu 36 4 2898181 2898181 + Silent SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A C A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a AHNAK 79026 hgsc.bcm.edu 36 11 62057174 62057174 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ATP13A4 84239 hgsc.bcm.edu 36 3 194693626 194693626 + Silent SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a BMP2K 55589 hgsc.bcm.edu 36 4 80005744 80005744 + Silent SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a C12orf63 374467 hgsc.bcm.edu 36 12 95674375 95674375 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CCDC39 339829 hgsc.bcm.edu 36 3 181848716 181848716 + Missense_Mutation SNP T T A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T A T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CCDC57 284001 hgsc.bcm.edu 36 17 77745287 77745287 + Missense_Mutation SNP T T G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T G G T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CLEC16A 23274 hgsc.bcm.edu 36 16 10972560 10972560 + Silent SNP A A G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A G A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a DUOX2 50506 hgsc.bcm.edu 36 15 43185225 43185225 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ELFN2 114794 hgsc.bcm.edu 36 22 36100588 36100588 + Silent SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FRS3 10817 hgsc.bcm.edu 36 6 41848568 41848568 + Missense_Mutation SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a GLRA3 8001 hgsc.bcm.edu 36 4 175946608 175946608 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a INVS 27130 hgsc.bcm.edu 36 9 102055116 102055116 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a KIF5A 3798 hgsc.bcm.edu 36 12 56261522 56261522 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MEIS2 4212 hgsc.bcm.edu 36 15 35175832 35175832 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MS4A3 932 hgsc.bcm.edu 36 11 59586643 59586643 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a NBPF7 343505 hgsc.bcm.edu 36 1 120183350 120183350 + Missense_Mutation SNP T T A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T A T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PCDH24 54825 hgsc.bcm.edu 36 5 175928408 175928408 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PLD3 23646 hgsc.bcm.edu 36 19 45575839 45575839 + Silent SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PLXNB2 23654 hgsc.bcm.edu 36 22 49063285 49063285 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a SPHKAP 80309 hgsc.bcm.edu 36 2 228591546 228591546 + Silent SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a SRP72 6731 hgsc.bcm.edu 36 4 57048888 57048888 + Silent SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A C A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TMEM48 55706 hgsc.bcm.edu 36 1 54035264 54035264 + Missense_Mutation SNP A A T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A T A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a USO1 8615 hgsc.bcm.edu 36 4 76927369 76927369 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ZNF780B 163131 hgsc.bcm.edu 36 19 45233535 45233535 + Silent SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A C A A Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ZNF823 55552 hgsc.bcm.edu 36 19 11694208 11694208 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a HECW1 23072 hgsc.bcm.edu 36 7 43450726 43450726 + Missense_Mutation SNP A A G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ANK3 288 hgsc.bcm.edu 36 10 61517940 61517940 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a C1orf101 257044 hgsc.bcm.edu 36 1 242813826 242813826 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CAMSAP1L1 23271 hgsc.bcm.edu 36 1 199084781 199084781 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CDC2 983 hgsc.bcm.edu 36 10 62209967 62209967 + Splice_Site SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G A A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a CHUK 1147 hgsc.bcm.edu 36 10 101968553 101968553 + Missense_Mutation SNP T T G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T G T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a COBL 23242 hgsc.bcm.edu 36 7 51063355 51063355 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a COL6A6 131873 hgsc.bcm.edu 36 3 131823372 131823380 + In_Frame_Del DEL AGGAGAGGC AGGAGAGGC - novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 AGGAGAGGC AGGAGAGGC AGGAGAGGC - AGGAGAGGC AGGAGAGGC Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FANCA 2175 hgsc.bcm.edu 36 16 88342636 88342636 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T C T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a GRIN2A 2903 hgsc.bcm.edu 36 16 9765235 9765235 + Missense_Mutation SNP T T A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T T A T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a IRAK3 11213 hgsc.bcm.edu 36 12 64924587 64924587 + Missense_Mutation SNP G G T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ITGA2B 3674 hgsc.bcm.edu 36 17 39808546 39808546 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MCM3 4172 hgsc.bcm.edu 36 6 52246522 52246522 + Missense_Mutation SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a MYO9A 4649 hgsc.bcm.edu 36 15 69909696 69909696 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a PPP2R5B 5526 hgsc.bcm.edu 36 11 64455654 64455654 + Silent SNP G G A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a RAB2B 84932 hgsc.bcm.edu 36 14 21001674 21001674 + Missense_Mutation SNP G G C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a RAPGEF1 2889 hgsc.bcm.edu 36 9 133449611 133449611 + Missense_Mutation SNP T T C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T C T T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a RYR2 6262 hgsc.bcm.edu 36 1 236014831 236014831 + Missense_Mutation SNP A A G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A G A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a SLC7A10 56301 hgsc.bcm.edu 36 19 38394218 38394218 + Missense_Mutation SNP A A G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A A G A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TBCCD1 55171 hgsc.bcm.edu 36 3 187759049 187759049 + Missense_Mutation SNP C C A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TP53 7157 hgsc.bcm.edu 36 17 7519255 7519255 + Missense_Mutation SNP A A C novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 A A C C A A Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a TRIP12 9320 hgsc.bcm.edu 36 2 230432098 230432098 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ZEB2 9839 hgsc.bcm.edu 36 2 144872888 144872888 + Missense_Mutation SNP C C T novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a ZNF546 339327 hgsc.bcm.edu 36 19 45205058 45205058 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a FRY 10129 hgsc.bcm.edu 36 13 31733792 31733792 + Missense_Mutation SNP C C G novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 C C C G C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a UGCGL2 55757 hgsc.bcm.edu 36 13 95377328 95377328 + Nonsense_Mutation SNP T A A novel TCGA-13-0906-01A-01W-0419-10 TCGA-13-0906-10A-01W-0419-10 T T A A T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID ef5c41db-f01d-4a64-8929-dbc15bd3a69f cea04517-0560-4bde-94e9-ecac1d0de51a