Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PINK1 65018 broad.mit.edu 36 1 20848267 20848267 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TNN 63923 broad.mit.edu 36 1 173333294 173333294 + Silent SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 CACNA1C 775 broad.mit.edu 36 12 2492406 2492406 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 CACNA1C 775 broad.mit.edu 36 12 2644415 2644415 + Missense_Mutation SNP C C G novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 FGF23 8074 broad.mit.edu 36 12 4350108 4350108 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 AKAP3 10566 broad.mit.edu 36 12 4607565 4607565 + Missense_Mutation SNP C C A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TEP1 7011 broad.mit.edu 36 14 19906445 19906445 + Silent SNP A A G novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 ZFYVE26 23503 broad.mit.edu 36 14 67330180 67330180 + Silent SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 ZNF839 55778 broad.mit.edu 36 14 101875210 101875210 + Silent SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 MAP1A 4130 broad.mit.edu 36 15 41606018 41606018 + Silent SNP C C A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 GLDN 342035 broad.mit.edu 36 15 49483974 49483974 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 NARG2 79664 broad.mit.edu 36 15 58521964 58521964 + Missense_Mutation SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 SLC12A4 6560 broad.mit.edu 36 16 66553081 66553081 + Silent SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TP53 7157 broad.mit.edu 36 17 7519095 7519095 + Splice_Site SNP C C A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 KCNF1 3754 broad.mit.edu 36 2 10970756 10970756 + Silent SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 STAMBP 10617 broad.mit.edu 36 2 73930019 73930019 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 NEB 4703 broad.mit.edu 36 2 152101951 152101951 + Missense_Mutation SNP A A C novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 ANKRD5 63926 broad.mit.edu 36 20 9978770 9978770 + Missense_Mutation SNP T T A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 DIP2A 23181 broad.mit.edu 36 21 46784257 46784257 + Missense_Mutation SNP A A G novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TUBGCP6 85378 broad.mit.edu 36 22 49000210 49000210 + Silent SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 MLH1 4292 broad.mit.edu 36 3 37017540 37017540 + Nonsense_Mutation SNP C C T rs63751221 unknown TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 CYP8B1 1582 broad.mit.edu 36 3 42892237 42892237 + Nonsense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TTC14 151613 broad.mit.edu 36 3 181810643 181810643 + Silent SNP T T C novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 KIT 3815 broad.mit.edu 36 4 55299416 55299416 + Missense_Mutation SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 NUP155 9631 broad.mit.edu 36 5 37353868 37353868 + Nonsense_Mutation SNP C C A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 UBR2 23304 broad.mit.edu 36 6 42731385 42731385 + Missense_Mutation SNP G G C novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 CUL7 9820 broad.mit.edu 36 6 43121332 43121332 + Missense_Mutation SNP T T C novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 PRSS35 167681 broad.mit.edu 36 6 84290040 84290040 + Missense_Mutation SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 ABCA13 154664 broad.mit.edu 36 7 48289036 48289036 + Nonsense_Mutation SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TFR2 7036 broad.mit.edu 36 7 100056646 100056646 + Missense_Mutation SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 CUX1 1523 broad.mit.edu 36 7 101628828 101628828 + Missense_Mutation SNP C C G novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 GRM8 2918 broad.mit.edu 36 7 126533856 126533856 + Silent SNP C C T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 FAM135B 51059 broad.mit.edu 36 8 139232705 139232705 + Silent SNP G G A novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 FAM166A 401565 broad.mit.edu 36 9 139258058 139258058 + Missense_Mutation SNP A A T novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 PTEN 5728 broad.mit.edu 36 10 89707652 89707652 + Frame_Shift_Del DEL C - - novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 C C - - C C Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 DAD1 1603 broad.mit.edu 36 14 22127883 22127884 + Frame_Shift_Del DEL AG - AG novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 AG AG - - AG AG Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 REST 5978 broad.mit.edu 36 4 57472321 57472324 + Frame_Shift_Del DEL ACAT - - novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 ACAT ACAT - - ACAT ACAT Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 TNXB 7148 broad.mit.edu 36 6 32137896 32137925 + Splice_Site DEL CCCATCGTCCACTCACCTGTCACCCCGATG - CCCATCGTCCACTCACCTGTCACCCCGATG novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 CCCATCGTCCACTCACCTGTCACCCCGATG CCCATCGTCCACTCACCTGTCACCCCGATG - - CCCATCGTCCACTCACCTGTCACCCCGATG CCCATCGTCCACTCACCTGTCACCCCGATG Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931 SLC37A3 84255 broad.mit.edu 36 7 139694985 139694987 + In_Frame_Del DEL AGA - AGA novel none TCGA-13-1492-01A-01D-0472-08 TCGA-13-1492-10A-01W-0545-08 AGA AGA - - AGA AGA Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx bb917fd2-fe7b-4675-8af4-d986e3f4cdaf 85153653-fa5d-43da-bcee-6c3ae8ffc931