Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error LRRC39 127495 genome.wustl.edu 36 1 100390656 100390656 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 100390656 100390656 G A SNP LRRC39 NM_144620 human genbank 54_36p -1 provisional silent c.825 p.F275 1 NULL - - no_errors LOC126987 126987 genome.wustl.edu 36 1 106424948 106424948 + RNA SNP A T T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A T T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 106424948 106424948 A T SNP LOC126987 XR_016153 human genbank 54_36p -1 model rna NULL NULL 0.25 - - - no_errors LOC391073 391073 genome.wustl.edu 36 1 119778664 119778664 + RNA SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 119778664 119778664 G T SNP LOC391073 XR_016552 human genbank 54_36p -1 model rna NULL NULL 1 - - - pseudogene LOC391081 391081 genome.wustl.edu 36 1 119953103 119953103 + RNA SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 119953103 119953103 T A SNP LOC391081 XR_017445 human genbank 54_36p 1 model rna NULL NULL 0.07 - - - pseudogene GJA8 2703 genome.wustl.edu 36 1 145847875 145847875 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 145847875 145847875 A G SNP GJA8 NM_005267 human genbank 54_36p 1 validated missense c.1169 p.K390R 0.44 NULL - - no_errors BOLA1 51027 genome.wustl.edu 36 1 148138293 148138293 + Missense_Mutation SNP G G C Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 148138293 148138293 G C SNP BOLA1 NM_016074 human genbank 54_36p 1 validated missense c.57 p.L19F 0.049 NULL - - no_errors SHC1 6464 genome.wustl.edu 36 1 153209367 153209367 + Missense_Mutation SNP G G A Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 153209367 153209367 G A SNP SHC1 NM_183001 human genbank 54_36p -1 validated missense c.260 p.A87V 0.1 NULL HMMPfam_SH2,HMMPfam_PID,superfamily_PH domain-like,superfamily_SH2 domain - no_errors LMNA 4000 genome.wustl.edu 36 1 154371347 154371347 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 154371347 154371347 T G SNP LMNA NM_170707 human genbank 54_36p 1 reviewed missense c.767 p.V256G 1 HMMPfam_Filament HMMPfam_IF_tail;HMMPfam_Filament;superfamily_Prefoldin;superfamily_Lamin A/C globular tail domain - no_errors SPTA1 6708 genome.wustl.edu 36 1 156850149 156850149 + Silent SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 156850149 156850149 A C SNP SPTA1 NM_003126 human genbank 54_36p -1 reviewed silent c.6975 p.A2325 0.79 NULL - - no_errors MNDA 4332 genome.wustl.edu 36 1 157085639 157085639 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 157085639 157085639 G A SNP MNDA NM_002432 human genbank 54_36p 1 reviewed missense c.1212 p.M404I NULL HMMPfam_PAAD_DAPIN;HMMPfam_HIN - no_errors PYHIN1 149628 genome.wustl.edu 36 1 157180391 157180391 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 157180391 157180391 A T SNP PYHIN1 NM_152501 human genbank 54_36p 1 validated missense c.1190 p.Q397L 0.11 NULL - - no_errors ARHGAP30 257106 genome.wustl.edu 36 1 159285106 159285106 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 159285106 159285106 G C SNP ARHGAP30 NM_001025598 human genbank 54_36p -1 validated missense c.2329 p.Q777E 0.01 NULL - - no_errors SLC9A11 284525 genome.wustl.edu 36 1 171771678 171771678 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 171771678 171771678 C G SNP SLC9A11 NM_178527 human genbank 54_36p -1 validated missense c.1689 p.M563I 0.05 NULL - - no_errors PAX7 5081 genome.wustl.edu 36 1 18833476 18833476 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 18833476 18833476 G C SNP PAX7 NM_002584 human genbank 54_36p 1 reviewed missense c.178 p.V60L 1 HMMPfam_PAX HMMPfam_Homeobox;HMMPfam_PAX;superfamily_Homeodomain-like - no_errors PPFIA4 8497 genome.wustl.edu 36 1 201304215 201304215 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 201304215 201304215 T A SNP PPFIA4 NM_015053 human genbank 54_36p 1 validated missense c.1642 p.W548R 1 HMMPfam_SAM_2 HMMPfam_SAM_1;superfamily_SAM/Pointed domain;HMMPfam_SAM_2 - no_errors KCNH1 3756 genome.wustl.edu 36 1 208924017 208924017 + Silent SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 208924017 208924017 C T SNP KCNH1 NM_172362 human genbank 54_36p -1 reviewed silent c.2199 p.P733 0.67 NULL - - no_errors USH2A 7399 genome.wustl.edu 36 1 214313107 214313107 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 214313107 214313107 C T SNP USH2A NM_206933 human genbank 54_36p -1 reviewed missense c.5731 p.G1911R 1 NULL - - no_errors HSPG2 3339 genome.wustl.edu 36 1 22078135 22078135 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 22078135 22078135 T C SNP HSPG2 NM_005529 human genbank 54_36p -1 validated missense c.2410 p.M804V 0.93 HMMPfam_Laminin_EGF superfamily_Immunoglobulin;superfamily_EGF/Laminin;superfamily_LDL receptor-like module;superfamily_TNF receptor-like;HMMPfam_Laminin_B;HMMPfam_SEA;HMMPfam_Laminin_EGF;HMMPfam_Ldl_recept_a;HMMPfam_EGF;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_G_2;HMMPfam_I-set;HMMPfam_V-set;HMMPfam_ig - no_errors RYR2 6262 genome.wustl.edu 36 1 235904746 235904746 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 235904746 235904746 C G SNP RYR2 NM_001035 human genbank 54_36p 1 reviewed missense c.8807 p.A2936G 1 NULL HMMPfam_RYDR_ITPR;HMMPfam_efhand;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815) - no_errors WDTC1 23038 genome.wustl.edu 36 1 27505417 27505417 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 27505417 27505417 G A SNP WDTC1 NM_015023 human genbank 54_36p 1 validated missense c.1987 p.D663N 1 NULL - - no_errors COL16A1 1307 genome.wustl.edu 36 1 31924299 31924299 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 31924299 31924299 C T SNP COL16A1 NM_001856 human genbank 54_36p -1 reviewed missense c.1864 p.A622T 0.59 NULL - - no_errors ZSCAN20 7579 genome.wustl.edu 36 1 33731718 33731718 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 33731718 33731718 A G SNP ZSCAN20 NM_145238 human genbank 54_36p 1 validated missense c.1789 p.T597A NULL - - no_errors SLC2A5 6518 genome.wustl.edu 36 1 9021500 9021500 + Missense_Mutation SNP C T T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 1 9021500 9021500 C T SNP SLC2A5 NM_003039 human genbank 54_36p -1 validated missense c.1072 p.V358M 0.823 HMMPfam_Sugar_tr HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter - no_errors INA 9118 genome.wustl.edu 36 10 105038213 105038213 + Missense_Mutation SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 10 105038213 105038213 A C SNP INA NM_032727 human genbank 54_36p 1 validated missense c.1297 p.S433R 0.47 NULL HMMPfam_Filament;HMMPfam_Filament_head;superfamily_alpha-catenin/vinculin - no_errors NRAP 4892 genome.wustl.edu 36 10 115358206 115358206 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 10 115358206 115358206 G T SNP NRAP NM_198060 human genbank 54_36p -1 validated missense c.3659 p.P1220H 1 HMMPfam_Nebulin HMMPfam_Nebulin;HMMPfam_LIM;superfamily_Glucocorticoid receptor-like (DNA-binding domain) - no_errors ST8SIA6 338596 genome.wustl.edu 36 10 17403280 17403280 + Missense_Mutation SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 10 17403280 17403280 A C SNP ST8SIA6 NM_001004470 human genbank 54_36p -1 validated missense c.800 p.L267R 0.14 HMMPfam_Glyco_transf_29 HMMPfam_Glyco_transf_29 - no_errors LOC399748 399748 genome.wustl.edu 36 10 43421077 43421077 + RNA SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 10 43421077 43421077 C A SNP LOC399748 XR_016318 human genbank 54_36p -1 model rna NULL NULL 0.93 - - - pseudogene LOC100128737 100128737 genome.wustl.edu 36 7 107176637 107176637 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 107176637 107176637 C T SNP LOC100128737 XM_001718329 human genbank 54_36p -1 model missense c.3 p.M1I 1 NULL - - no_errors CUL5 8065 genome.wustl.edu 36 11 107430593 107430593 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 107430593 107430593 G T SNP CUL5 NM_003478 human genbank 54_36p 1 validated missense c.563 p.C188F 1 HMMPfam_Cullin "HMMPfam_Cullin;superfamily_""Winged helix"" DNA-binding domain;superfamily_Cullin repeat;superfamily_Cullin homology domain" - no_errors NNMT 4837 genome.wustl.edu 36 11 113672574 113672574 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 113672574 113672574 C G SNP NNMT NM_006169 human genbank 54_36p 1 reviewed missense c.86 p.S29C 0.69 HMMPfam_NNMT_PNMT_TEMT HMMPfam_NNMT_PNMT_TEMT;superfamily_S-adenosyl-L-methionine-dependent methyltransferases - no_errors JAM3 83700 genome.wustl.edu 36 11 133444255 133444255 + Missense_Mutation SNP C C A Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 133444255 133444255 C A SNP JAM3 NM_032801 human genbank 54_36p 1 reviewed missense c.202 p.L68I 0.779 NULL HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin - no_errors PIK3C2A 5286 genome.wustl.edu 36 11 17128748 17128748 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 17128748 17128748 G C SNP PIK3C2A NM_002645 human genbank 54_36p -1 validated missense c.1200 p.H400Q 0.01 NULL superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_Protein kinase-like (PK-like);superfamily_ARM repeat;superfamily_Ubiquitin-like;superfamily_PX domain;C2;HMMPfam_C2;PI3K_rbd;HMMPfam_PI3K_rbd;PI3_PI4_kinase;HMMPfam_PI3_PI4_kinase;PI3Ka;HMMPfam_PI3Ka;PX;HMMPfam_PX;PI3K_C2;HMMPfam_PI3K_C2 - no_errors OR51E2 81285 genome.wustl.edu 36 11 4659616 4659616 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 4659616 4659616 C A SNP OR51E2 NM_030774 human genbank 54_36p -1 validated missense c.902 p.R301L 0.14 NULL - - no_errors CELF1 10658 genome.wustl.edu 36 11 47464899 47464899 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 47464899 47464899 C G SNP CUGBP1 NM_001025596 human genbank 54_36p -1 reviewed missense c.289 p.A97P 1 NULL - - no_errors OR5AS1 219447 genome.wustl.edu 36 11 55555307 55555307 + Silent SNP T T G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 55555307 55555307 T G SNP OR5AS1 NM_001001921 human genbank 54_36p 1 provisional silent c.837 p.T279 NULL - - no_errors OR8U1 219417 genome.wustl.edu 36 11 55899999 55899999 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 55899999 55899999 G T SNP OR8U1 NM_001005204 human genbank 54_36p 1 provisional missense c.324 p.M108I 0 NULL - - no_errors OR4D6 219983 genome.wustl.edu 36 11 58981869 58981869 + Missense_Mutation SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 58981869 58981869 A C SNP OR4D6 NM_001004708 human genbank 54_36p 1 provisional missense c.860 p.Y287S 0.99 NULL - - no_errors SCGB2A2 4250 genome.wustl.edu 36 11 61794293 61794293 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 61794293 61794293 C T SNP SCGB2A2 NM_002411 human genbank 54_36p 1 provisional missense c.29 p.A10V 0.01 HMMPfam_Uteroglobin HMMPfam_Uteroglobin;superfamily_Uteroglobin-like - no_errors C2CD3 26005 genome.wustl.edu 36 11 73521642 73521642 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 73521642 73521642 C G SNP C2CD3 NM_015531 human genbank 54_36p -1 validated missense c.1112 p.R371P NULL HMMPfam_C2;superfamily_C2 domain (Calcium/lipid-binding domain CaLB) - no_errors ODZ4 26011 genome.wustl.edu 36 11 78065017 78065017 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 78065017 78065017 C T SNP ODZ4 NM_001098816 human genbank 54_36p -1 validated missense c.3338 p.G1113D 1 NULL - - no_errors FAT3 120114 genome.wustl.edu 36 11 91725598 91725598 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 11 91725598 91725598 G T SNP FAT3 NM_001008781 human genbank 54_36p 1 validated missense c.672 p.K224N 0.98 NULL - - no_errors STAB2 55576 genome.wustl.edu 36 12 102578251 102578251 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 102578251 102578251 C T SNP STAB2 NM_017564 human genbank 54_36p 1 reviewed missense c.1747 p.L583F 1 HMMPfam_Fasciclin HMMPfam_Xlink;HMMPfam_Fasciclin;HMMPfam_EGF;HMMPfam_EGF_alliinase;superfamily_Mannose 6-phosphate receptor domain;superfamily_Growth factor receptor domain;HMMPfam_EGF_2;superfamily_C-type lectin-like;superfamily_EGF/Laminin;superfamily_FAS1 domain - no_errors TDG 6996 genome.wustl.edu 36 12 102900832 102900832 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 102900832 102900832 G T SNP TDG NM_003211 human genbank 54_36p 1 reviewed missense c.604 p.D202Y 1 HMMPfam_UDG HMMPfam_UDG;superfamily_DNA glycosylase - no_errors C12orf51 283450 genome.wustl.edu 36 12 111094866 111094866 + Missense_Mutation SNP C C T Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 111094866 111094866 C T SNP C12orf51 NM_001109662 human genbank 54_36p -1 validated missense c.10511 p.C3504Y 1 NULL - - no_errors GPR133 283383 genome.wustl.edu 36 12 130016964 130016964 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 130016964 130016964 T A SNP GPR133 NM_198827 human genbank 54_36p 1 validated missense c.107 p.F36Y 1 NULL HMMPfam_GPS;HMMPfam_7tm_2;superfamily_Concanavalin A-like lectins/glucanases;superfamily_Family A G protein-coupled receptor-like - no_errors KIAA0528 9847 genome.wustl.edu 36 12 22513988 22513988 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 22513988 22513988 C G SNP KIAA0528 NM_014802 human genbank 54_36p -1 predicted missense c.2455 p.D819H 1 NULL - - no_errors IFLTD1 160492 genome.wustl.edu 36 12 25570406 25570406 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 25570406 25570406 G A SNP IFLTD1 NM_152590 human genbank 54_36p -1 validated missense c.629 p.A210V 0.4 NULL - - no_errors SCN8A 6334 genome.wustl.edu 36 12 50401778 50401778 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 50401778 50401778 G A SNP SCN8A NM_014191 human genbank 54_36p 1 validated missense c.1817 p.R606Q 1 NULL HMMPfam_IQ;HMMPfam_Ion_trans;HMMPfam_Na_trans_assoc;superfamily_EF-hand;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Voltage-gated potassium channels - no_errors ACSM4 341392 genome.wustl.edu 36 12 7348231 7348231 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 7348231 7348231 A T SNP ACSM4 NM_001080454 human genbank 54_36p 1 inferred missense c.37 p.I13F 0.02 NULL - - no_errors CAPS2 84698 genome.wustl.edu 36 12 73962383 73962383 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 73962383 73962383 T G SNP CAPS2 NM_032606 human genbank 54_36p -1 validated missense c.888 p.K296N 1 NULL - - no_errors CSRP2 1466 genome.wustl.edu 36 12 75776877 75776877 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 75776877 75776877 C A SNP CSRP2 NM_001321 human genbank 54_36p -1 reviewed missense c.568 p.V190F 1 NULL HMMPfam_LIM;superfamily_Glucocorticoid receptor-like (DNA-binding domain) - no_errors CEP290 80184 genome.wustl.edu 36 12 86989297 86989297 + Silent SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 86989297 86989297 A G SNP CEP290 NM_025114 human genbank 54_36p -1 reviewed silent c.5916 p.D1972 1 NULL superfamily_Spectrin repeat;superfamily_Translin - no_errors PLXNC1 10154 genome.wustl.edu 36 12 93099437 93099437 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 93099437 93099437 G A SNP PLXNC1 NM_005761 human genbank 54_36p 1 provisional missense c.1288 p.V430I 0.52 NULL - - no_errors SCYL2 55681 genome.wustl.edu 36 12 99232491 99232491 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 12 99232491 99232491 G A SNP SCYL2 NM_017988 human genbank 54_36p 1 provisional missense c.1063 p.G355R 1 NULL - - no_errors SACS 26278 genome.wustl.edu 36 13 22811870 22811870 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 13 22811870 22811870 T C SNP SACS NM_014363 human genbank 54_36p -1 validated missense c.3704 p.H1235R 1 NULL - - no_errors FREM2 341640 genome.wustl.edu 36 13 38256814 38256814 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 13 38256814 38256814 T C SNP FREM2 NM_207361 human genbank 54_36p 1 reviewed missense c.5888 p.I1963T 0.07 HMMPfam_Calx-beta HMMPfam_Calx-beta;superfamily_Cadherin-like - no_errors LOC642458 642458 genome.wustl.edu 36 14 18558349 18558349 + RNA SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 14 18558349 18558349 T A SNP LOC642458 XR_016116 human genbank 54_36p -1 model rna NULL NULL 1 - - - pseudogene OR4N2 390429 genome.wustl.edu 36 14 19366355 19366355 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 14 19366355 19366355 A T SNP OR4N2 NM_001004723 human genbank 54_36p 1 provisional missense c.908 p.N303I NULL - - no_errors HEATR5A 25938 genome.wustl.edu 36 14 30926116 30926116 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 14 30926116 30926116 C G SNP HEATR5A NM_015473 human genbank 54_36p -1 validated missense c.271 p.D91H 1 NULL - - no_errors AKAP6 9472 genome.wustl.edu 36 14 32363306 32363306 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 14 32363306 32363306 C G SNP AKAP6 NM_004274 human genbank 54_36p 1 reviewed missense c.6536 p.S2179C NULL superfamily_Spectrin repeat - no_errors CCDC88C 440193 genome.wustl.edu 36 14 90841994 90841994 + Silent SNP C G G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C G G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 14 90841994 90841994 C G SNP CCDC88C NM_001080414 human genbank 54_36p -1 validated silent c.3225 p.L1075 1 NULL - - no_errors uc003vzj.1 0 genome.wustl.edu 36 7 141952571 141952571 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 141952571 141952571 A G SNP uc003vzj.1 ENST00000390387 human ensembl 54_36p 1 known missense c.74 p.Q25R 0.75 NULL - - no_stop_codon:bad_bp_length_for_coding_region FSIP1 161835 genome.wustl.edu 36 15 37843406 37843406 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 37843406 37843406 G T SNP FSIP1 NM_152597 human genbank 54_36p -1 validated missense c.467 p.S156Y 0.14 NULL - - no_errors GLDN 342035 genome.wustl.edu 36 15 49474451 49474451 + Silent SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 49474451 49474451 C T SNP GLDN NM_181789 human genbank 54_36p 1 validated silent c.669 p.S223 1 NULL - - no_errors RNF111 54778 genome.wustl.edu 36 15 57172032 57172032 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 57172032 57172032 A T SNP RNF111 NM_017610 human genbank 54_36p 1 reviewed missense c.2744 p.K915I 1 NULL HMMPfam_zf-C3HC4;superfamily_RING/U-box - no_errors TRIP4 56238 genome.wustl.edu 36 15 62477071 62477071 + Splice_Site SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 62477071 62477071 G T SNP TRIP4 NM_016213 human genbank 54_36p 1 validated splice_site c.618+1 e4+1 1 - - - no_errors PIAS1 8554 genome.wustl.edu 36 15 66221345 66221345 + Silent SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 66221345 66221345 C T SNP PIAS1 NM_016166 human genbank 54_36p 1 reviewed silent c.477 p.D159 1 NULL HMMPfam_SAP;HMMPfam_zf-MIZ;superfamily_RING/U-box - no_errors HEXA 3073 genome.wustl.edu 36 15 70425947 70425947 + Silent SNP G A A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 70425947 70425947 G A SNP HEXA NM_000520 human genbank 54_36p -1 reviewed silent c.1305 p.Y435 0.95 HMMPfam_Glyco_hydro_20 HMMPfam_Glyco_hydro_20b;HMMPfam_Glyco_hydro_20;superfamily_(Trans)glycosidases;superfamily_beta-N-acetylhexosaminidase-like domain - no_errors HCN4 10021 genome.wustl.edu 36 15 71423026 71423026 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 71423026 71423026 T A SNP HCN4 NM_005477 human genbank 54_36p -1 reviewed missense c.962 p.E321V 1 NULL - - no_errors ALPK3 57538 genome.wustl.edu 36 15 83201845 83201845 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 15 83201845 83201845 G C SNP ALPK3 NM_020778 human genbank 54_36p 1 validated missense c.3478 p.D1160H 0.09 NULL HMMPfam_Alpha_kinase;superfamily_Protein kinase-like (PK-like);HMMPfam_I-set;superfamily_Immunoglobulin - no_errors UMOD 7369 genome.wustl.edu 36 16 20256187 20256187 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 16 20256187 20256187 G C SNP UMOD NM_001008389 human genbank 54_36p -1 reviewed missense c.1667 p.A556G 1 HMMPfam_Zona_pellucida HMMPfam_Zona_pellucida;HMMPfam_EGF;HMMPfam_EGF_CA;superfamily_EGF/Laminin - no_errors XPO6 23214 genome.wustl.edu 36 16 28099853 28099853 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 16 28099853 28099853 C G SNP XPO6 NM_015171 human genbank 54_36p -1 provisional missense c.4 p.A2P 1 NULL - - no_errors DOC2A 8448 genome.wustl.edu 36 16 29928851 29928851 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 16 29928851 29928851 G A SNP DOC2A NM_003586 human genbank 54_36p -1 reviewed missense c.194 p.A65V 0.2 NULL HMMPfam_C2;superfamily_C2 domain (Calcium/lipid-binding domain CaLB) - no_errors HYDIN 54768 genome.wustl.edu 36 16 69535298 69535298 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 16 69535298 69535298 G C SNP HYDIN NM_032821 human genbank 54_36p -1 validated missense c.6584 p.P2195R 0.49 NULL - - no_errors GAN 8139 genome.wustl.edu 36 16 79948921 79948921 + Missense_Mutation SNP G A A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G A A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 16 79948921 79948921 G A SNP GAN NM_022041 human genbank 54_36p 1 reviewed missense c.857 p.R286Q 1 NULL - - no_errors ADORA2B 136 genome.wustl.edu 36 17 15819310 15819310 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 15819310 15819310 C T SNP ADORA2B NM_000676 human genbank 54_36p 1 reviewed missense c.928 p.L310F 1 NULL - - no_errors RNF112 7732 genome.wustl.edu 36 17 19258027 19258027 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 19258027 19258027 G A SNP RNF112 ENST00000299604 human ensembl 54_36p 1 known missense c.853 p.D285N 1 NULL - - no_errors LOC646021 646021 genome.wustl.edu 36 17 26373157 26373157 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 26373157 26373157 G T SNP LOC646021 XM_933339 human genbank 54_36p 1 model missense c.810 p.Q270H 1 NULL - - no_errors PSMD3 5709 genome.wustl.edu 36 17 35405006 35405006 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 35405006 35405006 G T SNP PSMD3 NM_002809 human genbank 54_36p 1 reviewed missense c.1148 p.G383V 1 HMMPfam_PCI "HMMPfam_PCI;HMMPfam_Rpn3_C;superfamily_""Winged helix"" DNA-binding domain;superfamily_TPR-like" - no_errors LOC644397 644397 genome.wustl.edu 36 17 42450591 42450591 + RNA SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 42450591 42450591 A T SNP LOC644397 XR_042323 human genbank 54_36p 1 model rna NULL NULL - - - pseudogene NXN 64359 genome.wustl.edu 36 17 672422 672422 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 672422 672422 C T SNP NXN NM_022463 human genbank 54_36p -1 validated missense c.638 p.R213Q 1 HMMPfam_AhpC-TSA HMMPfam_AhpC-TSA;superfamily_Thioredoxin-like - no_errors SLC16A11 162515 genome.wustl.edu 36 17 6885879 6885879 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 6885879 6885879 C A SNP SLC16A11 NM_153357 human genbank 54_36p -1 provisional missense c.1259 p.S420I 1 NULL - - no_errors C1QTNF1 114897 genome.wustl.edu 36 17 74555347 74555347 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 74555347 74555347 G A SNP C1QTNF1 NM_030968 human genbank 54_36p 1 validated missense c.428 p.S143N 0.96 NULL HMMPfam_C1q;HMMPfam_Collagen;superfamily_TNF-like - no_errors TP53 7157 genome.wustl.edu 36 17 7519165 7519165 + Missense_Mutation SNP T C C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T C C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 17 7519165 7519165 T C SNP TP53 NM_000546 human genbank 54_36p -1 reviewed missense c.490 p.K164E 1 HMMPfam_P53 superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD - no_errors LOC728211 728211 genome.wustl.edu 36 18 12066319 12066319 + RNA SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 18 12066319 12066319 A T SNP LOC728211 XR_015403 human genbank 54_36p -1 model rna NULL NULL 0.98 - - - pseudogene CHST9 83539 genome.wustl.edu 36 18 22750360 22750360 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 18 22750360 22750360 C T SNP CHST9 NM_031422 human genbank 54_36p -1 validated missense c.1193 p.R398K 1 NULL - - no_errors ACAA2 10449 genome.wustl.edu 36 18 45564297 45564297 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 18 45564297 45564297 C G SNP ACAA2 NM_006111 human genbank 54_36p -1 reviewed missense c.1112 p.R371P 1 HMMPfam_Thiolase_C HMMPfam_Thiolase_N;HMMPfam_Thiolase_C;superfamily_Thiolase-like - no_errors KIAA0802 23255 genome.wustl.edu 36 18 8774735 8774735 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 18 8774735 8774735 C A SNP KIAA0802 NM_015210 human genbank 54_36p 1 predicted missense c.1625 p.P542H 1 NULL - - no_errors CYP4F12 66002 genome.wustl.edu 36 19 15654204 15654204 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 15654204 15654204 G T SNP CYP4F12 NM_023944 human genbank 54_36p 1 reviewed missense c.531 p.K177N 1 HMMPfam_p450 HMMPfam_p450;superfamily_Cytochrome P450 - no_errors ZNF90 7643 genome.wustl.edu 36 19 20077091 20077091 + Silent SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 20077091 20077091 T A SNP ZNF90 ENST00000300996 human ensembl 54_36p 1 known silent c.192 p.T64 NULL - - no_stop_codon ZNF724P 440519 genome.wustl.edu 36 19 23197718 23197718 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 23197718 23197718 C G SNP ZNF724P ENST00000397097 human ensembl 54_36p -1 known missense c.833 p.G278A 1 NULL - - no_start_codon:no_stop_codon ZNF91 7644 genome.wustl.edu 36 19 23334796 23334796 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 23334796 23334796 T G SNP ZNF91 NM_003430 human genbank 54_36p -1 validated missense c.2825 p.E942A 0.04 HMMPfam_zf-C2H2 HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers - no_errors FAM187B 148109 genome.wustl.edu 36 19 40411150 40411150 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 40411150 40411150 G A SNP FAM187B NM_152481 human genbank 54_36p -1 provisional missense c.274 p.L92F NULL - - no_errors RYR1 6261 genome.wustl.edu 36 19 43690218 43690218 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 43690218 43690218 C G SNP RYR1 NM_000540 human genbank 54_36p 1 reviewed missense c.8843 p.S2948W 1 NULL HMMPfam_RYDR_ITPR;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815) - no_errors NUMBL 9253 genome.wustl.edu 36 19 45880683 45880683 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 45880683 45880683 G A SNP NUMBL NM_004756 human genbank 54_36p -1 validated missense c.280 p.R94W 1 HMMPfam_PID HMMPfam_PID;HMMPfam_NumbF;superfamily_PH domain-like - no_errors B9D2 80776 genome.wustl.edu 36 19 46555746 46555746 + Nonsense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 46555746 46555746 G T SNP B9D2 NM_030578 human genbank 54_36p -1 provisional nonsense c.110 p.S37* 0.98 NULL - - no_errors MYH14 79784 genome.wustl.edu 36 19 55496777 55496777 + Silent SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 55496777 55496777 C G SNP MYH14 NM_001077186 human genbank 54_36p 1 reviewed silent c.5418 p.A1806 1 NULL - - no_errors KLK3 354 genome.wustl.edu 36 19 56053124 56053124 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 56053124 56053124 C A SNP KLK3 NM_001648 human genbank 54_36p 1 reviewed missense c.234 p.H78Q 0.21 HMMPfam_Trypsin HMMPfam_Trypsin;superfamily_Trypsin-like serine proteases - no_errors SIGLEC8 27181 genome.wustl.edu 36 19 56649775 56649775 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 56649775 56649775 G T SNP SIGLEC8 NM_014442 human genbank 54_36p -1 validated missense c.1123 p.L375M 0.11 NULL - - no_errors ZNF613 79898 genome.wustl.edu 36 19 57140701 57140701 + Silent SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 57140701 57140701 T C SNP ZNF613 NM_001031721 human genbank 54_36p 1 provisional silent c.1753 p.L585 NULL - - no_errors NLRP12 91662 genome.wustl.edu 36 19 59006346 59006346 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 59006346 59006346 C T SNP NLRP12 NM_144687 human genbank 54_36p -1 reviewed missense c.379 p.E127K 0.28 NULL - - no_errors BRSK1 84446 genome.wustl.edu 36 19 60497400 60497400 + Silent SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 60497400 60497400 C A SNP BRSK1 NM_032430 human genbank 54_36p 1 validated silent c.582 p.P194 1 HMMPfam_Pkinase HMMPfam_Pkinase;superfamily_Protein kinase-like (PK-like) - no_errors NLRP13 126204 genome.wustl.edu 36 19 61115783 61115783 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 61115783 61115783 T A SNP NLRP13 NM_176810 human genbank 54_36p -1 validated missense c.1212 p.E404D NULL HMMPfam_LRR_1;HMMPfam_PAAD_DAPIN;HMMPfam_NACHT;superfamily_DEATH domain;superfamily_RNI-like;superfamily_P-loop containing nucleoside triphosphate hydrolases - no_errors ZNF583 147949 genome.wustl.edu 36 19 61617528 61617528 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 61617528 61617528 G T SNP ZNF583 NM_152478 human genbank 54_36p 1 provisional missense c.139 p.V47F NULL HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers;HMMPfam_KRAB - no_errors ZNF324B 388569 genome.wustl.edu 36 19 63659017 63659017 + Silent SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 63659017 63659017 G C SNP ZNF324B NM_207395 human genbank 54_36p 1 validated silent c.894 p.S298 HMMPfam_zf-C2H2 HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers;HMMPfam_KRAB - no_errors OR7D2 162998 genome.wustl.edu 36 19 9157785 9157785 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 9157785 9157785 C G SNP OR7D2 NM_175883 human genbank 54_36p 1 provisional missense c.328 p.L110V NULL - - no_errors NPAS2 4862 genome.wustl.edu 36 2 100931172 100931172 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 100931172 100931172 A G SNP NPAS2 NM_002518 human genbank 54_36p 1 reviewed missense c.407 p.Q136R 1 HMMPfam_PAS HMMPfam_HLH;superfamily_HLH helix-loop-helix DNA-binding domain;HMMPfam_PAS_3;HMMPfam_PAS;superfamily_PYP-like sensor domain (PAS domain) - no_errors PSD4 23550 genome.wustl.edu 36 2 113660286 113660286 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 113660286 113660286 C G SNP PSD4 NM_012455 human genbank 54_36p 1 validated missense c.1611 p.H537Q NULL - - no_errors UGGT1 56886 genome.wustl.edu 36 2 128603092 128603092 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 128603092 128603092 A G SNP UGCGL1 NM_020120 human genbank 54_36p 1 validated missense c.1246 p.N416D 1 NULL HMMPfam_UDP-g_GGTase;superfamily_Nucleotide-diphospho-sugar transferases - no_errors TTN 7273 genome.wustl.edu 36 2 179174109 179174109 + Silent SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 179174109 179174109 G T SNP TTN NM_133378 human genbank 54_36p -1 reviewed silent c.48063 p.G16021 1 NULL - - pseudogene:no_stop_codon:bad_bp_length_for_coding_region ASNSD1 54529 genome.wustl.edu 36 2 190239831 190239831 + Missense_Mutation SNP C C A Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 190239831 190239831 C A SNP ASNSD1 NM_019048 human genbank 54_36p 1 validated missense c.728 p.P243H 0.997 NULL - - no_errors HECW2 57520 genome.wustl.edu 36 2 197006214 197006214 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 197006214 197006214 C T SNP HECW2 NM_020760 human genbank 54_36p -1 provisional missense c.179 p.S60N 1 NULL HMMPfam_C2;HMMPfam_HECT;HMMPfam_WW;superfamily_WW domain;superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_Hect E3 ligase catalytic domain - no_errors PTPRN 5798 genome.wustl.edu 36 2 219871007 219871007 + Silent SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 219871007 219871007 C G SNP PTPRN NM_002846 human genbank 54_36p -1 reviewed silent c.1731 p.V577 1 NULL HMMPfam_Y_phosphatase;superfamily_(Phosphotyrosine protein) phosphatases II - no_errors GPR55 9290 genome.wustl.edu 36 2 231483234 231483234 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 231483234 231483234 C G SNP GPR55 NM_005683 human genbank 54_36p -1 validated missense c.688 p.A230P NULL - - no_errors SCLY 51540 genome.wustl.edu 36 2 238656632 238656632 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 238656632 238656632 A T SNP SCLY NM_016510 human genbank 54_36p 1 validated missense c.782 p.Y261F 1 HMMPfam_Aminotran_5 HMMPfam_Aminotran_5;superfamily_PLP-dependent transferases - no_errors ADCY3 109 genome.wustl.edu 36 2 24904517 24904517 + Nonsense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 24904517 24904517 G T SNP ADCY3 NM_004036 human genbank 54_36p -1 reviewed nonsense c.2190 p.Y730* 1 NULL HMMPfam_Guanylate_cyc;superfamily_Adenylyl and guanylyl cyclase catalytic domain - no_errors LTBP1 4052 genome.wustl.edu 36 2 33393840 33393840 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 33393840 33393840 G A SNP LTBP1 NM_206943 human genbank 54_36p 1 reviewed missense c.3733 p.D1245N 1 HMMPfam_EGF_CA HMMPfam_EGF_CA;superfamily_EGF/Laminin;superfamily_TB module/8-cys domain;HMMPfam_TB;HMMPfam_EGF - no_errors MTA3 57504 genome.wustl.edu 36 2 42789748 42789748 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 42789748 42789748 G T SNP MTA3 NM_020744 human genbank 54_36p 1 provisional missense c.1533 p.M511I 1 NULL - - no_errors LOC729317 729317 genome.wustl.edu 36 2 65286552 65286552 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 65286552 65286552 T A SNP LOC729317 XM_001133585 human genbank 54_36p 1 model missense c.806 p.L269H 0.86 NULL - - no_errors HK2 3099 genome.wustl.edu 36 2 74935084 74935084 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 74935084 74935084 G T SNP HK2 NM_000189 human genbank 54_36p 1 reviewed missense c.220 p.G74W 1 HMMPfam_Hexokinase_1 superfamily_Actin-like ATPase domain;HMMPfam_Hexokinase_1;HMMPfam_Hexokinase_2 - no_errors RIMS4 140730 genome.wustl.edu 36 20 42818332 42818332 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 20 42818332 42818332 G A SNP RIMS4 NM_182970 human genbank 54_36p -1 validated silent c.667 p.L223 1 NULL - - no_errors RIMS4 140730 genome.wustl.edu 36 20 42818333 42818333 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 20 42818333 42818333 C G SNP RIMS4 NM_182970 human genbank 54_36p -1 validated missense c.666 p.E222D 1 NULL - - no_errors PTGIS 5740 genome.wustl.edu 36 20 47564276 47564276 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 20 47564276 47564276 C A SNP PTGIS NM_000961 human genbank 54_36p -1 reviewed missense c.919 p.A307S 0.98 HMMPfam_p450 HMMPfam_p450;superfamily_Cytochrome P450 - no_errors TIAM1 7074 genome.wustl.edu 36 21 31560651 31560651 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 21 31560651 31560651 G A SNP TIAM1 NM_003253 human genbank 54_36p -1 validated missense c.509 p.S170F 1 NULL HMMPfam_RhoGEF;HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_PH;HMMPfam_RBD;superfamily_DBL homology domain (DH-domain);superfamily_PH domain-like;superfamily_Ubiquitin-like - no_errors C21orf63 59271 genome.wustl.edu 36 21 32809077 32809077 + Silent SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 21 32809077 32809077 A G SNP C21orf63 NM_058187 human genbank 54_36p 1 validated silent c.1032 p.R344 0.13 NULL HMMPfam_Gal_Lectin - no_errors XKR3 150165 genome.wustl.edu 36 22 15645233 15645233 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 22 15645233 15645233 A G SNP XKR3 NM_175878 human genbank 54_36p -1 validated missense c.656 p.I219T 1 NULL - - no_errors RGL4 266747 genome.wustl.edu 36 22 22368801 22368801 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 22 22368801 22368801 G T SNP RGL4 NM_153615 human genbank 54_36p 1 provisional missense c.1087 p.A363S 0.59 NULL - - no_errors PLA2G6 8398 genome.wustl.edu 36 22 36839528 36839528 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 22 36839528 36839528 C T SNP PLA2G6 NM_003560 human genbank 54_36p -1 reviewed missense c.2114 p.C705Y 1 NULL HMMPfam_Ank;superfamily_Ankyrin repeat;HMMPfam_Patatin;superfamily_FabD/lysophospholipase-like - no_errors WBP2NL 164684 genome.wustl.edu 36 22 40745687 40745687 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 22 40745687 40745687 C G SNP WBP2NL NM_152613 human genbank 54_36p 1 validated missense c.247 p.L83V 0.95 NULL - - no_errors ENSG00000223116 0 genome.wustl.edu 36 13 22450013 22450013 + RNA SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 13 22450013 22450013 C T SNP ENSG00000223116 ENST00000411184 human ensembl 54_36p -1 novel rna NULL NULL - - - no_errors GPR128 84873 genome.wustl.edu 36 3 101896480 101896480 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 101896480 101896480 C T SNP GPR128 NM_032787 human genbank 54_36p 1 provisional missense c.2339 p.P780L NULL - - no_errors LOC285359 285359 genome.wustl.edu 36 3 102914651 102914651 + RNA SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 102914651 102914651 A G SNP LOC285359 NR_002941 human genbank 54_36p 1 validated rna NULL NULL 1 - - - pseudogene ZBTB20 26137 genome.wustl.edu 36 3 115540682 115540682 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 115540682 115540682 G T SNP ZBTB20 NM_015642 human genbank 54_36p -1 provisional missense c.1867 p.P623T 0.98 NULL - - no_errors ZXDC 79364 genome.wustl.edu 36 3 127673755 127673755 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 127673755 127673755 A G SNP ZXDC NM_025112 human genbank 54_36p -1 validated missense c.991 p.S331P 1 NULL - - no_errors C3orf25 90288 genome.wustl.edu 36 3 130623314 130623314 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 130623314 130623314 G A SNP C3orf25 NM_207307 human genbank 54_36p -1 predicted silent c.72 p.P24 NULL - - no_errors COPB2 9276 genome.wustl.edu 36 3 140559794 140559794 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 140559794 140559794 C T SNP COPB2 NM_004766 human genbank 54_36p -1 validated missense c.2563 p.G855R 0.9 NULL - - no_errors KLHL6 89857 genome.wustl.edu 36 3 184692984 184692984 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 184692984 184692984 T C SNP KLHL6 NM_130446 human genbank 54_36p -1 validated missense c.1556 p.Y519C 1 NULL - - no_errors EIF4G1 1981 genome.wustl.edu 36 3 185525419 185525419 + Silent SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 185525419 185525419 G T SNP EIF4G1 NM_182917 human genbank 54_36p 1 reviewed silent c.2679 p.R893 1 HMMPfam_MIF4G HMMPfam_W2;HMMPfam_MIF4G;HMMPfam_MA3;superfamily_ARM repeat - no_errors CELSR3 1951 genome.wustl.edu 36 3 48664427 48664427 + Missense_Mutation SNP C G G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C G G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 48664427 48664427 C G SNP CELSR3 NM_001407 human genbank 54_36p -1 reviewed missense c.5810 p.R1937P 0.09 NULL HMMPfam_GPS,HMMPfam_7tm_2,HMMPfam_HRM,HMMPfam_Laminin_EGF,HMMPfam_Cadherin,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,superfamily_Cadherin-like,superfamily_EGF/Laminin - no_errors ENSG00000217332 0 genome.wustl.edu 36 10 31018437 31018437 + Splice_Site SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 10 31018437 31018437 A C SNP ENSG00000217332 ENST00000404846 human ensembl 54_36p 1 known splice_site c.NULL NULL 1 - - - no_coding_region:pseudogene FAT1 2195 genome.wustl.edu 36 4 187777672 187777672 + Silent SNP C T T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C T T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 187777672 187777672 C T SNP FAT1 NM_005245 human genbank 54_36p -1 reviewed silent c.7062 p.R2354 0.94 NULL - - no_errors LPHN3 23284 genome.wustl.edu 36 4 62281453 62281453 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 62281453 62281453 T A SNP LPHN3 NM_015236 human genbank 54_36p 1 reviewed missense c.781 p.S261T 1 NULL - - no_errors LOC644556 644556 genome.wustl.edu 36 4 63366880 63366880 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 63366880 63366880 G A SNP LOC644556 XM_001719457 human genbank 54_36p 1 model missense c.814 p.D272N 1 NULL - - no_errors PPBP 5473 genome.wustl.edu 36 4 75072542 75072542 + Missense_Mutation SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 75072542 75072542 C A SNP PPBP NM_002704 human genbank 54_36p -1 reviewed missense c.143 p.G48V NULL HMMPfam_IL8;superfamily_Interleukin 8-like chemokines - no_errors BMP3 651 genome.wustl.edu 36 4 82186049 82186049 + Silent SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 82186049 82186049 A G SNP BMP3 NM_001201 human genbank 54_36p 1 reviewed silent c.450 p.G150 0.01 NULL HMMPfam_TGF_beta;superfamily_Cystine-knot cytokines - no_errors HELQ 113510 genome.wustl.edu 36 4 84556968 84556968 + Silent SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 84556968 84556968 G C SNP HELQ NM_133636 human genbank 54_36p -1 validated silent c.3138 p.L1046 0.93 NULL HMMPfam_Helicase_C;superfamily_Rad51 N-terminal domain-like;HMMPfam_DEAD;superfamily_P-loop containing nucleoside triphosphate hydrolases - no_errors PTPN13 5783 genome.wustl.edu 36 4 87874919 87874919 + Missense_Mutation SNP C C T Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 87874919 87874919 C T SNP PTPN13 NM_080685 human genbank 54_36p 1 reviewed missense c.2018 p.T673I 0.815 HMMPfam_Band_41 HMMPfam_Y_phosphatase,HMMPfam_Band_41,HMMPfam_PDZ,superfamily_PDZ domain-like,superfamily_PAZ domain,superfamily_Second domain of FERM,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_Ubiquitin-like - no_errors HPGDS 27306 genome.wustl.edu 36 4 95458112 95458112 + Frame_Shift_Del DEL A A - Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A - A A Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 4 95458112 95458112 A - DEL PGDS NM_014485 human genbank 54_36p -1 reviewed frame_shift_del c.161 p.L54fs 1 HMMPfam_GST_N HMMPfam_GST_N,HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain,superfamily_Thioredoxin-like (deletion:cds_exon[95458047,95458139]) no_errors APC 324 genome.wustl.edu 36 5 112202549 112202549 + Missense_Mutation SNP G G A rs28933379 Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 112202549 112202549 G A SNP APC NM_000038 human genbank 54_36p 1 reviewed missense c.3359 p.G1120E 1 NULL Arm;HMMPfam_Arm;APC_crr;HMMPfam_APC_crr;SAMP;HMMPfam_SAMP;EB1_binding;HMMPfam_EB1_binding;APC_basic;HMMPfam_APC_basic;APC_15aa;HMMPfam_APC_15aa - no_errors APC 324 genome.wustl.edu 36 5 112205204 112205204 + Nonsense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 112205204 112205204 C G SNP APC NM_000038 human genbank 54_36p 1 reviewed nonsense c.6014 p.S2005* 0.66 NULL Arm;HMMPfam_Arm;APC_crr;HMMPfam_APC_crr;SAMP;HMMPfam_SAMP;EB1_binding;HMMPfam_EB1_binding;APC_basic;HMMPfam_APC_basic;APC_15aa;HMMPfam_APC_15aa - no_errors ADAMTS19 171019 genome.wustl.edu 36 5 129065169 129065169 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 129065169 129065169 G A SNP ADAMTS19 NM_133638 human genbank 54_36p 1 reviewed silent c.3126 p.A1042 0.62 NULL - - no_errors PCDHB7 56129 genome.wustl.edu 36 5 140534337 140534337 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 140534337 140534337 G A SNP PCDHB7 NM_018940 human genbank 54_36p 1 reviewed silent c.1737 p.A579 0.01 NULL - - no_errors PCDHB15 56121 genome.wustl.edu 36 5 140606896 140606896 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 140606896 140606896 G C SNP PCDHB15 NM_018935 human genbank 54_36p 1 reviewed missense c.1566 p.E522D 0.26 HMMPfam_Cadherin HMMPfam_Cadherin;HMMPfam_Cadherin_2;superfamily_Cadherin-like - no_errors PCDH1 5097 genome.wustl.edu 36 5 141223560 141223560 + Silent SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 141223560 141223560 C G SNP PCDH1 NM_032420 human genbank 54_36p -1 reviewed silent c.2520 p.G840 1 NULL - - no_errors ADRB2 154 genome.wustl.edu 36 5 148187638 148187638 + Frame_Shift_Del DEL G G - novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G - G G Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 148187638 148187638 G - DEL ADRB2 NM_000024 human genbank 54_36p 1 validated frame_shift_del c.1051 p.N352fs 0.17 NULL HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like (deletion:cds_exon[148186588;148187829]) no_errors SH3TC2 79628 genome.wustl.edu 36 5 148372410 148372410 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 148372410 148372410 T A SNP SH3TC2 NM_024577 human genbank 54_36p -1 reviewed missense c.3134 p.E1045V 1 NULL - - no_errors ITK 3702 genome.wustl.edu 36 5 156582560 156582560 + Missense_Mutation SNP A A C Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 156582560 156582560 A C SNP ITK NM_005546 human genbank 54_36p 1 reviewed missense c.605 p.D202A 1 HMMPfam_SH3_1 SH2,HMMPfam_SH2,Pkinase_Tyr,HMMPfam_Pkinase_Tyr,SH3_1,HMMPfam_SH3_1,BTK,HMMPfam_BTK,PH,HMMPfam_PH - no_errors GABRG2 2566 genome.wustl.edu 36 5 161457389 161457389 + Silent SNP C C A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C A C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 161457389 161457389 C A SNP GABRG2 NM_198904 human genbank 54_36p 1 reviewed silent c.495 p.T165 0.96 HMMPfam_Neur_chan_LBD HMMPfam_Neur_chan_memb;HMMPfam_Neur_chan_LBD;superfamily_Nicotinic receptor ligand binding domain-like;superfamily_Neurotransmitter-gated ion-channel transmembrane pore - no_errors RASGEF1C 255426 genome.wustl.edu 36 5 179478982 179478982 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 179478982 179478982 C T SNP RASGEF1C NM_175062 human genbank 54_36p -1 validated missense c.877 p.G293S 1 NULL - - no_errors ENC1 8507 genome.wustl.edu 36 5 73967028 73967028 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 5 73967028 73967028 C G SNP ENC1 NM_003633 human genbank 54_36p -1 validated missense c.1039 p.G347R 1 HMMPfam_Kelch_1 HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain,HMMPfam_BACK,HMMPfam_BTB,superfamily_POZ domain - no_errors MIR518A2 574491 genome.wustl.edu 36 19 58934421 58934421 + RNA SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 19 58934421 58934421 G T SNP MIRN518A2 ENST00000384966 human ensembl 54_36p 1 known rna NULL NULL - - - no_errors PDSS2 57107 genome.wustl.edu 36 6 107673480 107673480 + Missense_Mutation SNP C C G Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 107673480 107673480 C G SNP PDSS2 NM_020381 human genbank 54_36p -1 validated missense c.667 p.V223L 1 NULL - - no_errors ENPP1 5167 genome.wustl.edu 36 6 132212840 132212840 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 132212840 132212840 C T SNP ENPP1 NM_006208 human genbank 54_36p 1 reviewed missense c.175 p.R59C 1 HMMPfam_Somatomedin_B HMMPfam_Somatomedin_B;HMMPfam_Phosphodiest;superfamily_Alkaline phosphatase-like;superfamily_His-Me finger endonucleases;superfamily_Somatomedin B domain - no_errors PEX3 8504 genome.wustl.edu 36 6 143834393 143834393 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 143834393 143834393 C G SNP PEX3 NM_003630 human genbank 54_36p 1 reviewed missense c.530 p.T177R 0.996 NULL - - no_errors UST 10090 genome.wustl.edu 36 6 149384304 149384304 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 149384304 149384304 G C SNP UST NM_005715 human genbank 54_36p 1 validated missense c.931 p.D311H 1 HMMPfam_HS2ST HMMPfam_HS2ST;superfamily_P-loop containing nucleoside triphosphate hydrolases - no_errors FAM120B 84498 genome.wustl.edu 36 6 170555583 170555584 + Frame_Shift_Ins INS - - T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 - - - T - - Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 170555583 170555584 - T INS FAM120B NM_032448 human genbank 54_36p 1 provisional frame_shift_ins c.2713_2714 p.D905fs 0.913:0.942 NULL - - no_errors TNF 7124 genome.wustl.edu 36 6 31653042 31653042 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 31653042 31653042 C T SNP TNF NM_000594 human genbank 54_36p 1 reviewed missense c.451 p.L151F 0.96 HMMPfam_TNF HMMPfam_TNF;superfamily_TNF-like - no_errors COL11A2 1302 genome.wustl.edu 36 6 33262425 33262425 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 33262425 33262425 G T SNP COL11A2 NM_080680 human genbank 54_36p -1 reviewed missense c.755 p.P252Q 0.77 NULL - - no_errors RXRB 6257 genome.wustl.edu 36 6 33271352 33271352 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 33271352 33271352 G A SNP RXRB NM_021976 human genbank 54_36p -1 reviewed missense c.1229 p.S410L 0.966 HMMPfam_Hormone_recep HMMPfam_Hormone_recep,HMMPfam_zf-C4,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain) - no_errors ABCC10 89845 genome.wustl.edu 36 6 43508756 43508756 + Nonsense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 43508756 43508756 C T SNP ABCC10 NM_033450 human genbank 54_36p 1 reviewed nonsense c.931 p.Q311* 0.97 HMMPfam_ABC_membrane HMMPfam_ABC_membrane;HMMPfam_ABC_tran;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain - no_errors DEFB114 245928 genome.wustl.edu 36 6 50036110 50036110 + Missense_Mutation SNP T T A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T A T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 50036110 50036110 T A SNP DEFB114 NM_001037499 human genbank 54_36p -1 provisional missense c.64 p.T22S NULL - - no_errors COL9A1 1297 genome.wustl.edu 36 6 71068485 71068485 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 71068485 71068485 A T SNP COL9A1 NM_001851 human genbank 54_36p -1 reviewed missense c.28 p.F10I 1 NULL - - no_errors RRAGD 58528 genome.wustl.edu 36 6 90145745 90145745 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 90145745 90145745 T C SNP RRAGD NM_021244 human genbank 54_36p -1 validated missense c.676 p.I226V 1 NULL - - no_errors MANEA 79694 genome.wustl.edu 36 6 96141209 96141209 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 6 96141209 96141209 A T SNP MANEA NM_024641 human genbank 54_36p 1 validated missense c.173 p.N58I NULL - - no_errors LRCH4 4034 genome.wustl.edu 36 7 100011832 100011832 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 100011832 100011832 G T SNP LRCH4 NM_002319 human genbank 54_36p -1 reviewed missense c.1603 p.P535T HMMPfam_CH HMMPfam_LRR_1;HMMPfam_CH;superfamily_Calponin-homology domain CH-domain;superfamily_L domain-like - no_errors FBXO24 26261 genome.wustl.edu 36 7 100025873 100025873 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 100025873 100025873 G C SNP FBXO24 NM_033506 human genbank 54_36p 1 reviewed missense c.279 p.Q93H 1 NULL HMMPfam_F-box;superfamily_RCC1/BLIP-II;superfamily_F-box domain - no_errors MUC17 140453 genome.wustl.edu 36 7 100470712 100470712 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 100470712 100470712 A T SNP MUC17 NM_001040105 human genbank 54_36p 1 provisional missense c.9295 p.T3099S 0.06 NULL HMMPfam_SEA;superfamily_EGF/Laminin;superfamily_SEA domain - no_errors WNT2 7472 genome.wustl.edu 36 7 116724987 116724987 + Silent SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 116724987 116724987 A T SNP WNT2 NM_003391 human genbank 54_36p -1 reviewed silent c.768 p.A256 0.98 HMMPfam_wnt wnt;HMMPfam_wnt - no_errors PAX4 5078 genome.wustl.edu 36 7 127040334 127040334 + Silent SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 127040334 127040334 G C SNP PAX4 NM_006193 human genbank 54_36p -1 reviewed silent c.669 p.L223 1 NULL - - no_errors CHRM2 1129 genome.wustl.edu 36 7 136350436 136350436 + Missense_Mutation SNP T T G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 136350436 136350436 T G SNP CHRM2 NM_000739 human genbank 54_36p 1 reviewed missense c.284 p.V95G 1 NULL - - no_errors DENND2A 27147 genome.wustl.edu 36 7 139947739 139947739 + Missense_Mutation SNP A A C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A C A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 139947739 139947739 A C SNP DENND2A NM_015689 human genbank 54_36p -1 validated missense c.928 p.S310A 1 NULL HMMPfam_DENN;HMMPfam_dDENN;HMMPfam_uDENN - no_errors GIMAP5 55340 genome.wustl.edu 36 7 150070313 150070313 + Silent SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 150070313 150070313 C G SNP GIMAP5 NM_018384 human genbank 54_36p 1 reviewed silent c.153 p.P51 NULL - - no_errors ABP1 26 genome.wustl.edu 36 7 150188644 150188644 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 150188644 150188644 T C SNP ABP1 NM_001091 human genbank 54_36p 1 reviewed missense c.1979 p.I660T 1 HMMPfam_Cu_amine_oxid HMMPfam_Cu_amine_oxid;superfamily_Amine oxidase catalytic domain;HMMPfam_Cu_amine_oxidN2;HMMPfam_Cu_amine_oxidN3;superfamily_Amine oxidase N-terminal region - no_errors C7orf16 10842 genome.wustl.edu 36 7 31713361 31713361 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 31713361 31713361 A G SNP C7orf16 NM_006658 human genbank 54_36p 1 validated missense c.407 p.D136G 0.91 NULL - - no_errors BMPER 168667 genome.wustl.edu 36 7 33943483 33943483 + Missense_Mutation SNP C C G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C G C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 33943483 33943483 C G SNP BMPER NM_133468 human genbank 54_36p 1 validated missense c.277 p.L93V 1 NULL - - no_errors C7orf62 219557 genome.wustl.edu 36 7 88261851 88261851 + Silent SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 88261851 88261851 A G SNP MGC26647 NM_152706 human genbank 54_36p -1 predicted silent c.342 p.Y114 NULL - - no_errors COL1A2 1278 genome.wustl.edu 36 7 93892885 93892885 + Missense_Mutation SNP G G A Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 93892885 93892885 G A SNP COL1A2 NM_000089 human genbank 54_36p 1 reviewed missense c.2809 p.G937S 1 HMMPfam_Collagen HMMPfam_Collagen,Fibrinogen C-terminal domain-like,superfamily_Fibrinogen C-terminal domain-like,COLFI,HMMPfam_COLFI,Collagen - no_errors ASNS 440 genome.wustl.edu 36 7 97320320 97320320 + Nonsense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 97320320 97320320 G C SNP ASNS NM_001673 human genbank 54_36p -1 reviewed nonsense c.1464 p.Y488* 0.86 NULL HMMPfam_GATase_2;HMMPfam_Asn_synthase;superfamily_Adenine nucleotide alpha hydrolases-like;superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases) - no_errors LMTK2 22853 genome.wustl.edu 36 7 97671325 97671325 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 97671325 97671325 G A SNP LMTK2 NM_014916 human genbank 54_36p 1 validated silent c.4374 p.T1458 0.01 NULL Pkinase_Tyr;HMMPfam_Pkinase_Tyr - no_errors TAF6 6878 genome.wustl.edu 36 7 99547786 99547786 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 7 99547786 99547786 G T SNP TAF6 NM_005641 human genbank 54_36p -1 reviewed missense c.601 p.L201M 0.84 NULL superfamily_Seven-hairpin glycosidases;HMMPfam_TAF;superfamily_Histone-fold;HMMPfam_DUF1546 - no_errors ABRA 137735 genome.wustl.edu 36 8 107851408 107851408 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 8 107851408 107851408 G T SNP ABRA NM_139166 human genbank 54_36p -1 validated missense c.187 p.P63T NULL - - no_errors PKHD1L1 93035 genome.wustl.edu 36 8 110599579 110599579 + Frame_Shift_Del DEL C C - novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C - C C Unknown Valid Somatic 4 Capture Sanger_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 8 110599579 110599579 C - DEL PKHD1L1 NM_177531 human genbank 54_36p 1 validated frame_shift_del c.11697 p.L3900fs 0.53 NULL HMMPfam_TIG;superfamily_Cupredoxins;superfamily_Pectin lyase-like;superfamily_Composite domain of metallo-dependent hydrolases;superfamily_E set domains;superfamily_Anthrax protective antigen (deletion:cds_exon[110599572;110599913]) no_errors FAM135B 51059 genome.wustl.edu 36 8 139214064 139214064 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 8 139214064 139214064 A G SNP FAM135B NM_015912 human genbank 54_36p -1 validated missense c.4175 p.F1392S 1 NULL - - no_errors SHARPIN 81858 genome.wustl.edu 36 8 145225847 145225847 + Missense_Mutation SNP G G A Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 8 145225847 145225847 G A SNP SHARPIN ENST00000321205 human ensembl 54_36p -1 known missense c.1082 p.P361L 0.018 NULL - - no_errors MATN2 4147 genome.wustl.edu 36 8 99023205 99023205 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 8 99023205 99023205 A T SNP MATN2 NM_002380 human genbank 54_36p 1 reviewed missense c.737 p.E246V 0.979 HMMPfam_EGF HMMPfam_VWA,HMMPfam_EGF,superfamily_vWA-like,superfamily_EGF/Laminin - no_errors ZFP37 7539 genome.wustl.edu 36 9 114858731 114858731 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 114858731 114858731 C T SNP ZFP37 NM_003408 human genbank 54_36p -1 provisional missense c.59 p.R20K 0.02 NULL HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers - no_errors ODF2 4957 genome.wustl.edu 36 9 130296789 130296789 + Silent SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 130296789 130296789 G T SNP ODF2 NM_153437 human genbank 54_36p 1 reviewed silent c.1875 p.G625 1 NULL - - no_errors KIAA1797 54914 genome.wustl.edu 36 9 20871926 20871926 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 20871926 20871926 G T SNP KIAA1797 NM_017794 human genbank 54_36p 1 validated missense c.2374 p.G792W 1 NULL HMMPfam_HEAT;superfamily_ARM repeat - no_errors KIF24 347240 genome.wustl.edu 36 9 34245784 34245784 + Missense_Mutation SNP C C T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 C C C T C C Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 34245784 34245784 C T SNP KIF24 NM_194313 human genbank 54_36p -1 validated missense c.3821 p.C1274Y 0.9 NULL - - no_errors RANBP6 26953 genome.wustl.edu 36 9 6005291 6005291 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 6005291 6005291 T C SNP RANBP6 NM_012416 human genbank 54_36p -1 validated missense c.317 p.K106R 1 NULL - - no_errors RORB 6096 genome.wustl.edu 36 9 76447315 76447315 + Missense_Mutation SNP A A G novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A G A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 76447315 76447315 A G SNP RORB NM_006914 human genbank 54_36p 1 reviewed missense c.401 p.N134S 1 NULL HMMPfam_Hormone_recep;HMMPfam_zf-C4;superfamily_Nuclear receptor ligand-binding domain;superfamily_Glucocorticoid receptor-like (DNA-binding domain) - no_errors S1PR3 1903 genome.wustl.edu 36 9 90806867 90806867 + Missense_Mutation SNP G G T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G T G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 9 90806867 90806867 G T SNP S1PR3 NM_005226 human genbank 54_36p 1 reviewed missense c.932 p.R311L 1 NULL - - no_errors ENSG00000187900 0 genome.wustl.edu 36 3 99440079 99440079 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 3 99440079 99440079 G C SNP ENSG00000187900 ENST00000341450 human ensembl 54_36p 1 known missense c.77 p.S26T 0.01 NULL - - no_errors ZCCHC18 644353 genome.wustl.edu 36 X 103245659 103245659 + Missense_Mutation SNP A A T novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 A A A T A A Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 103245659 103245659 A T SNP ZCCHC18 ENST00000299903 human ensembl 54_36p 1 known missense c.201 p.Q67H 1 NULL - - no_errors FRMPD4 9758 genome.wustl.edu 36 X 12648667 12648667 + Missense_Mutation SNP T T C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T C T T Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 12648667 12648667 T C SNP FRMPD4 ENST00000304087 human ensembl 54_36p 1 known missense c.4037 p.I1346T 1 NULL superfamily_WW domain;HMMPfam_PDZ;superfamily_PDZ domain-like;superfamily_Second domain of FERM - no_start_codon KLHL34 257240 genome.wustl.edu 36 X 21584090 21584090 + Missense_Mutation SNP T T G Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 T T T G T T Unknown Valid Somatic Phase_III Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 21584090 21584090 T G SNP KLHL34 NM_153270 human genbank 54_36p -1 provisional missense c.1738 p.K580Q 0.998 NULL - - no_errors ACOT9 23597 genome.wustl.edu 36 X 23641194 23641194 + Missense_Mutation SNP G G C novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G C G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 23641194 23641194 G C SNP ACOT9 NM_001037171 human genbank 54_36p -1 validated missense c.641 p.A214G 1 NULL - - no_errors BCOR 54880 genome.wustl.edu 36 X 39807015 39807015 + Silent SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 39807015 39807015 G A SNP BCOR NM_017745 human genbank 54_36p -1 reviewed silent c.3999 p.H1333 1 NULL HMMPfam_Ank;superfamily_Ankyrin repeat - no_errors LPAR4 2846 genome.wustl.edu 36 X 77897606 77897606 + Missense_Mutation SNP G G A novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 G G G A G G Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a X 77897606 77897606 G A SNP LPAR4 NM_005296 human genbank 54_36p 1 reviewed missense c.584 p.R195H 1 NULL - - no_errors LIMS1 3987 genome.wustl.edu 36 2 108642556 108642557 + Nonsense_Mutation DNP TG TG CT novel Unknown TCGA-23-1022-01A-02W-0488-09 TCGA-23-1022-10A-01W-0488-09 TG TG TG CT TG TG Unknown Valid Somatic 4 Capture 454_PCR_WGA 1 dbGAP Illumina GAIIx 160a0e7d-315e-4de3-a7d4-928412fd909c 6bd506d5-4f1a-4f51-a71f-e453196b245a 2 108642556 108642557 TG CT DNP LIMS1 NM_004987 human genbank 54_36p 1 reviewed nonsense c.60_61 p.EK21* 0.773:1.000 superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM - no_errors