Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COMP 1311 hgsc.bcm.edu 36 19 18757323 18757324 + Frame_Shift_Ins INS - - GA novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 CSPP1 79848 hgsc.bcm.edu 36 8 68268328 68268329 + Frame_Shift_Ins INS - - G novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 IL16 3603 hgsc.bcm.edu 36 15 79359025 79359025 + Missense_Mutation SNP C C A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 KIAA1841 84542 hgsc.bcm.edu 36 2 61168827 61168828 + Frame_Shift_Del DEL TG TG - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 TG TG . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 KRT27 342574 hgsc.bcm.edu 36 17 36189533 36189534 + Frame_Shift_Ins INS - - A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 MYST4 23522 hgsc.bcm.edu 36 10 76451776 76451776 + Silent SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 MYST4 23522 hgsc.bcm.edu 36 10 76451912 76451914 + In_Frame_Del DEL GAA GAA - rs3217598 TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 GAA GAA . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 NF1 4763 hgsc.bcm.edu 36 17 26678704 26678707 + Frame_Shift_Del DEL TCTT TCTT - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 TCTT TCTT . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 NSUN5C 260294 hgsc.bcm.edu 36 7 72058325 72058329 + Frame_Shift_Del DEL GGTTC GGTTC - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 GGTTC GGTTC . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 OAS3 4940 hgsc.bcm.edu 36 12 111863798 111863798 + Missense_Mutation SNP G G T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PION 54103 hgsc.bcm.edu 36 7 76788041 76788041 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 RAD51 5888 hgsc.bcm.edu 36 15 38788604 38788604 + Nonsense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 RASAL1 8437 hgsc.bcm.edu 36 12 112050052 112050054 + In_Frame_Del DEL GTC GTC - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 GTC GTC . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 RNF25 64320 hgsc.bcm.edu 36 2 219237067 219237067 + Missense_Mutation SNP T T C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 RP1-199H16.1 646851 hgsc.bcm.edu 36 22 37325838 37325838 + Frame_Shift_Del DEL G G - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 TAF1B 9014 hgsc.bcm.edu 36 2 9962475 9962475 + Frame_Shift_Del DEL G G - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 TOB1 10140 hgsc.bcm.edu 36 17 46296048 46296049 + Frame_Shift_Ins INS - - A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 TOP2A 7153 hgsc.bcm.edu 36 17 35822744 35822745 + Frame_Shift_Ins INS - - CATGT novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 - - . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 TRNAU1AP 54952 hgsc.bcm.edu 36 1 28770319 28770319 + Missense_Mutation SNP G G C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 ZDBF2 57683 hgsc.bcm.edu 36 2 206883093 206883093 + Frame_Shift_Del DEL A A - novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 A A . . . . Unknown Untested Somatic Phase_IV WXS none SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 ABCC1 4363 hgsc.bcm.edu 36 16 16037833 16037833 + Silent SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 ACCSL 390110 hgsc.bcm.edu 36 11 44026255 44026255 + Silent SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 BBX 56987 hgsc.bcm.edu 36 3 108918169 108918169 + Missense_Mutation SNP T T C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T T C T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 CAMK1 8536 hgsc.bcm.edu 36 3 9778325 9778325 + Silent SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 CCL17 6361 hgsc.bcm.edu 36 16 56006603 56006603 + Missense_Mutation SNP T T A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T T A T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 CCRL2 9034 hgsc.bcm.edu 36 3 46424640 46424640 + Silent SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 COMMD5 28991 hgsc.bcm.edu 36 8 146047509 146047509 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 CYFIP1 23191 hgsc.bcm.edu 36 15 20515284 20515284 + Missense_Mutation SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 GPR113 165082 hgsc.bcm.edu 36 2 26389455 26389455 + Missense_Mutation SNP G G C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 IL6R 3570 hgsc.bcm.edu 36 1 152687256 152687256 + Silent SNP G G T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 IQGAP3 128239 hgsc.bcm.edu 36 1 154762923 154762923 + Silent SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 MFSD6 54842 hgsc.bcm.edu 36 2 191009562 191009562 + Missense_Mutation SNP T T G novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T T G T T Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 NCR2 9436 hgsc.bcm.edu 36 6 41412012 41412012 + Missense_Mutation SNP G G C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G C G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 OR6T1 219874 hgsc.bcm.edu 36 11 123319595 123319595 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PLXNC1 10154 hgsc.bcm.edu 36 12 93165974 93165974 + Silent SNP G G T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G T G G Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PRTN3 5657 hgsc.bcm.edu 36 19 798909 798909 + Silent SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 UBL7 84993 hgsc.bcm.edu 36 15 72530914 72530914 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PIGN 23556 hgsc.bcm.edu 36 18 57976014 57976014 + Missense_Mutation SNP T T C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 DNAH5 1767 hgsc.bcm.edu 36 5 13816005 13816005 + Missense_Mutation SNP G G T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 DNAH5 1767 hgsc.bcm.edu 36 5 13921012 13921012 + Missense_Mutation SNP C C A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 FRY 10129 hgsc.bcm.edu 36 13 31629510 31629510 + Missense_Mutation SNP G G C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G C G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 HAS2 3037 hgsc.bcm.edu 36 8 122710201 122710201 + Missense_Mutation SNP C C A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 ITGA8 8516 hgsc.bcm.edu 36 10 15760749 15760749 + Missense_Mutation SNP C C A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 LRP1 4035 hgsc.bcm.edu 36 12 55838612 55838612 + Nonsense_Mutation SNP C C A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C A C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 MAP3K10 4294 hgsc.bcm.edu 36 19 45412744 45412744 + Missense_Mutation SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 MCCC2 64087 hgsc.bcm.edu 36 5 70936053 70936053 + Splice_Site SNP T T C novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 T T T C T T Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PAFAH2 5051 hgsc.bcm.edu 36 1 26171773 26171773 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 PHKG2 5261 hgsc.bcm.edu 36 16 30675919 30675919 + Silent SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G G A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 SLCO6A1 133482 hgsc.bcm.edu 36 5 101737011 101737011 + Missense_Mutation SNP G G T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G T T G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 TP53 7157 hgsc.bcm.edu 36 17 7518257 7518257 + Missense_Mutation SNP G G A novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 G G A A G G Unknown Valid Somatic Phase_IV WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013 L1CAM 3897 hgsc.bcm.edu 36 X 152783770 152783770 + Missense_Mutation SNP C C T novel TCGA-23-1028-01A-01W-0484-10 TCGA-23-1028-10B-01W-0484-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 9ec6775e-5110-4a80-bae9-bc9833d88a84 9b11f1f4-ce72-4f8c-8d42-cd40fea4f013