Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PTPRF 5792 broad.mit.edu 36 1 43858402 43858402 + Missense_Mutation SNP G G C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CEP350 9857 broad.mit.edu 36 1 178346811 178346811 + Silent SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 IGFN1 91156 broad.mit.edu 36 1 199449280 199449280 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 ANO9 338440 broad.mit.edu 36 11 423411 423411 + Missense_Mutation SNP T T C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 MRVI1 10335 broad.mit.edu 36 11 10587885 10587885 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CST6 1474 broad.mit.edu 36 11 65536897 65536897 + Silent SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CASP4 837 broad.mit.edu 36 11 104325680 104325680 + Missense_Mutation SNP C C G novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 GRIA4 2893 broad.mit.edu 36 11 104988219 104988219 + Missense_Mutation SNP T T C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CACNA1C 775 broad.mit.edu 36 12 2667995 2667995 + Missense_Mutation SNP T T C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 C12orf40 283461 broad.mit.edu 36 12 38362848 38362848 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 OBFC2B 79035 broad.mit.edu 36 12 54909127 54909127 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 PAN2 9924 broad.mit.edu 36 12 55003406 55003406 + Missense_Mutation SNP G G T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 RIMBP2 23504 broad.mit.edu 36 12 129492506 129492506 + Silent SNP G G T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 XPO4 64328 broad.mit.edu 36 13 20294414 20294414 + Missense_Mutation SNP G G C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 RB1 5925 broad.mit.edu 36 13 47839649 47839649 + Nonsense_Mutation SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 TTC5 91875 broad.mit.edu 36 14 19827741 19827741 + Missense_Mutation SNP T T A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 SALL2 6297 broad.mit.edu 36 14 21061409 21061409 + Nonsense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 PMM2 5373 broad.mit.edu 36 16 8803258 8803258 + Silent SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 PARN 5073 broad.mit.edu 36 16 14438116 14438116 + Missense_Mutation SNP T T A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 GTF3C1 2975 broad.mit.edu 36 16 27408567 27408567 + Splice_Site SNP T T A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 LPO 4025 broad.mit.edu 36 17 53684649 53684649 + Missense_Mutation SNP G G T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 DDX42 11325 broad.mit.edu 36 17 59239996 59239996 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 SRP68 6730 broad.mit.edu 36 17 71558199 71558199 + Missense_Mutation SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 RNF157 114804 broad.mit.edu 36 17 71663969 71663969 + Missense_Mutation SNP T T G novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 ABCA7 10347 broad.mit.edu 36 19 993357 993357 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 TUBB4 10382 broad.mit.edu 36 19 6446339 6446339 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CENPO 79172 broad.mit.edu 36 2 24876153 24876153 + Missense_Mutation SNP A A T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 MYLK2 85366 broad.mit.edu 36 20 29878309 29878309 + Missense_Mutation SNP T T A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 C20orf71 128861 broad.mit.edu 36 20 31269108 31269108 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 C3orf63 23272 broad.mit.edu 36 3 56642224 56642224 + Nonsense_Mutation SNP A A T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 OSBPL11 114885 broad.mit.edu 36 3 126754155 126754155 + Missense_Mutation SNP A A C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 PPP2R3A 5523 broad.mit.edu 36 3 137204717 137204717 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CC2D2A 57545 broad.mit.edu 36 4 15178202 15178202 + Missense_Mutation SNP A A C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 NEK1 4750 broad.mit.edu 36 4 170634947 170634947 + Missense_Mutation SNP T T A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 UGT3A1 133688 broad.mit.edu 36 5 36001288 36001288 + Missense_Mutation SNP T T C novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 HEATR7B2 133558 broad.mit.edu 36 5 41074650 41074650 + Missense_Mutation SNP C C G novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 KCNN2 3781 broad.mit.edu 36 5 113836687 113836687 + Missense_Mutation SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 HLA-E 3133 broad.mit.edu 36 6 30568322 30568322 + Silent SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 TUBE1 51175 broad.mit.edu 36 6 112503940 112503940 + Silent SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 CHD7 55636 broad.mit.edu 36 8 61898988 61898988 + Silent SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 STMN2 11075 broad.mit.edu 36 8 80716197 80716197 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 TSPYL5 85453 broad.mit.edu 36 8 98358556 98358556 + Silent SNP C C G novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 RIMS2 9699 broad.mit.edu 36 8 104997935 104997935 + Missense_Mutation SNP C C G novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 RNF20 56254 broad.mit.edu 36 9 103362966 103362966 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 DFNB31 25861 broad.mit.edu 36 9 116204926 116204926 + Missense_Mutation SNP C C A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 FAM47A 158724 broad.mit.edu 36 X 34060102 34060102 + Missense_Mutation SNP C C T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 H2BFWT 158983 broad.mit.edu 36 X 103154861 103154861 + Missense_Mutation SNP G G T novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8 FLJ30058 158763 broad.mit.edu 36 X 130046292 130046292 + Missense_Mutation SNP G G A novel none TCGA-23-2079-01A-01W-0722-08 TCGA-23-2079-10A-01W-0722-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 8b073aec-a2de-41e8-ba03-8cdcff477913 1378eaa0-b775-4874-82e3-b665f36d9ae8