Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
HCN3	57657	genome.wustl.edu	36	1	153520961	153520961	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	1	153520961	153520961	C	T	SNP	HCN3	NM_020897	human	genbank	54_36p	1	validated	missense	c.878	p.S293L	1	NULL	-	-	no_errors
PADI4	23569	genome.wustl.edu	36	1	17558442	17558442	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	1	17558442	17558442	C	T	SNP	PADI4	NM_012387	human	genbank	54_36p	1	reviewed	silent	c.1710	p.L570	1	NULL	-	-	no_errors
C1orf107	27042	genome.wustl.edu	36	1	208082350	208082351	+	Missense_Mutation	DNP	GG	GG	CT	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	GG	GG	GG	CT	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	1	208082350	208082351	GG	CT	DNP	C1orf107	NM_014388	human	genbank	54_36p	1	validated	missense	c.1603_1604	p.G535L	1.000:1.000	NULL	-	-	no_errors
EXO1	9156	genome.wustl.edu	36	1	240083293	240083293	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	1	240083293	240083293	G	A	SNP	EXO1	NM_006027	human	genbank	54_36p	1	reviewed	missense	c.292	p.A98T	0.98	HMMPfam_XPG_N	HMMPfam_XPG_N;HMMPfam_XPG_I;superfamily_5' to 3' exonuclease C-terminal subdomain;superfamily_PIN domain-like	-	no_errors
GRID1	2894	genome.wustl.edu	36	10	87956304	87956304	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	10	87956304	87956304	G	A	SNP	GRID1	NM_017551	human	genbank	54_36p	-1	reviewed	missense	c.317	p.T106M	1	HMMPfam_ANF_receptor	HMMPfam_Lig_chan;HMMPfam_SBP_bac_3;HMMPfam_ANF_receptor;superfamily_MFS general substrate transporter;superfamily_Periplasmic binding protein-like I;superfamily_Periplasmic binding protein-like II	-	no_errors
SLC22A25	387601	genome.wustl.edu	36	11	62688035	62688035	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	11	62688035	62688035	C	T	SNP	SLC22A25	NM_199352	human	genbank	54_36p	-1	validated	missense	c.1481	p.R494Q		NULL	HMMPfam_MFS_1;superfamily_MFS general substrate transporter	-	no_errors
NARS2	79731	genome.wustl.edu	36	11	77957396	77957396	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	11	77957396	77957396	C	G	SNP	NARS2	NM_024678	human	genbank	54_36p	-1	provisional	missense	c.302	p.S101T	1	HMMPfam_tRNA_anti	HMMPfam_tRNA-synt_2;HMMPfam_tRNA_anti;superfamily_Nucleic acid-binding proteins;superfamily_Class II aaRS and biotin synthetases	-	no_errors
RHOF	54509	genome.wustl.edu	36	12	120701841	120701841	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	12	120701841	120701841	G	C	SNP	RHOF	NM_019034	human	genbank	54_36p	-1	validated	missense	c.582	p.S194R	0.94	HMMPfam_Ras	HMMPfam_Ras;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CACNA2D4	93589	genome.wustl.edu	36	12	1866479	1866479	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	12	1866479	1866479	C	A	SNP	CACNA2D4	NM_172364	human	genbank	54_36p	-1	reviewed	missense	c.799	p.D267Y	1	NULL	HMMPfam_VWA,HMMPfam_Cache_1,HMMPfam_VWA_N,superfamily_vWA-like	-	no_errors
PPM1H	57460	genome.wustl.edu	36	12	61374034	61374034	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	12	61374034	61374034	G	A	SNP	PPM1H	NM_020700	human	genbank	54_36p	-1	validated	silent	c.1086	p.T362	1	NULL	-	-	no_errors
BAZ1A	11177	genome.wustl.edu	36	14	34401181	34401181	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	14	34401181	34401181	T	A	SNP	BAZ1A	NM_013448	human	genbank	54_36p	-1	validated	missense	c.212	p.E71V	1	NULL	HMMPfam_Bromodomain;HMMPfam_PHD;HMMPfam_DDT;superfamily_FYVE/PHD zinc finger;superfamily_Bromodomain	-	no_errors
GPHB5	122876	genome.wustl.edu	36	14	62849570	62849570	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	14	62849570	62849570	T	C	SNP	GPHB5	NM_145171	human	genbank	54_36p	-1	validated	missense	c.217	p.N73D	1	NULL	-	-	no_errors
OR4N4	283694	genome.wustl.edu	36	15	19884684	19884684	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	15	19884684	19884684	A	T	SNP	OR4N4	NM_001005241	human	genbank	54_36p	1	provisional	missense	c.848	p.N283I	1	NULL	-	-	no_errors
TCF12	6938	genome.wustl.edu	36	15	55362041	55362041	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	15	55362041	55362041	G	C	SNP	TCF12	NM_207036	human	genbank	54_36p	1	reviewed	silent	c.2085	p.G695	1	NULL	HLH;HMMPfam_HLH;HLH helix-loop-helix DNA-binding domain;superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
MKL2	57496	genome.wustl.edu	36	16	14247013	14247013	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	16	14247013	14247013	T	G	SNP	MKL2	NM_014048	human	genbank	54_36p	1	validated	missense	c.1207	p.L403V	0.99	HMMPfam_SAP	HMMPfam_SAP;superfamily_SAP domain	-	no_errors
ATAD5	79915	genome.wustl.edu	36	17	26186388	26186388	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	17	26186388	26186388	C	T	SNP	ATAD5	NM_024857	human	genbank	54_36p	1	provisional	missense	c.1163	p.S388F	0.98	NULL	HMMPfam_AAA;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518982	7518982	+	Nonsense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	17	7518982	7518982	C	A	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	nonsense	c.592	p.E198*	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
MYH10	4628	genome.wustl.edu	36	17	8362699	8362699	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	17	8362699	8362699	C	T	SNP	MYH10	NM_005964	human	genbank	54_36p	-1	validated	missense	c.2386	p.V796I	1	HMMPfam_IQ	HMMPfam_IQ;HMMPfam_Myosin_head;HMMPfam_Myosin_tail_1;HMMPfam_Myosin_N;superfamily_Myosin S1 fragment N-terminal domain;superfamily_Prefoldin;superfamily_UBA-like;superfamily_HR1 repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF446	55663	genome.wustl.edu	36	19	63680403	63680403	+	Silent	SNP	A	G	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	19	63680403	63680403	A	G	SNP	ZNF446	NM_017908	human	genbank	54_36p	1	provisional	silent	c.6	p.P2	1	NULL	HMMPfam_KRAB;HMMPfam_SCAN;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ILKAP	80895	genome.wustl.edu	36	2	238767691	238767691	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	2	238767691	238767691	A	G	SNP	ILKAP	NM_030768	human	genbank	54_36p	-1	reviewed	missense	c.142	p.F48L	1	NULL	HMMPfam_PP2C;superfamily_Protein serine/threonine phosphatase 2C catalytic domain	-	no_errors
TPTE	7179	genome.wustl.edu	36	21	9963816	9963816	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	21	9963816	9963816	G	T	SNP	TPTE	NM_199261	human	genbank	54_36p	-1	validated	missense	c.758	p.S253Y	1	NULL	-	-	no_errors
LOC100130746	100130746	genome.wustl.edu	36	5	24207131	24207131	+	RNA	SNP	T	T	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	5	24207131	24207131	T	G	SNP	LOC100130746	XR_038810	human	genbank	54_36p	1	model	rna	NULL	NULL	0.93	-	-	-	pseudogene
ACPP	55	genome.wustl.edu	36	3	133558366	133558366	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	133558366	133558366	G	T	SNP	ACPP	NM_001099	human	genbank	54_36p	1	reviewed	missense	c.1115	p.C372F	0.98	NULL	HMMPfam_Acid_phosphat_A;superfamily_Phosphoglycerate mutase-like	-	no_errors
ADIPOQ	9370	genome.wustl.edu	36	3	188054895	188054895	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	188054895	188054895	G	T	SNP	ADIPOQ	NM_004797	human	genbank	54_36p	1	reviewed	missense	c.443	p.G148V	1	NULL	-	-	no_errors
CNTN4	152330	genome.wustl.edu	36	3	3053974	3053974	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	3053974	3053974	C	A	SNP	CNTN4	NM_175607	human	genbank	54_36p	1	reviewed	missense	c.2054	p.P685H	1	HMMPfam_fn3	fn3;HMMPfam_fn3;I-set;HMMPfam_I-set;ig;HMMPfam_ig	-	no_errors
CCR9	10803	genome.wustl.edu	36	3	45918252	45918252	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	45918252	45918252	G	T	SNP	CCR9	NM_031200	human	genbank	54_36p	1	reviewed	missense	c.968	p.R323I	0.93	NULL	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
KBTBD8	84541	genome.wustl.edu	36	3	67141284	67141284	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	67141284	67141284	C	G	SNP	KBTBD8	NM_032505	human	genbank	54_36p	1	provisional	missense	c.1513	p.Q505E	1	NULL	-	-	no_errors
EPHA3	2042	genome.wustl.edu	36	3	89582187	89582187	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	89582187	89582187	G	A	SNP	EPHA3	NM_005233	human	genbank	54_36p	1	reviewed	silent	c.2667	p.K889	1	NULL	Ephrin_lbd;HMMPfam_Ephrin_lbd;Pkinase_Tyr;HMMPfam_Pkinase_Tyr;fn3;HMMPfam_fn3;SAM_2;HMMPfam_SAM_2	-	no_errors
ADH1C	126	genome.wustl.edu	36	4	100476955	100476955	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	4	100476955	100476955	T	C	SNP	ADH1C	NM_000669	human	genbank	54_36p	-1	reviewed	missense	c.1105	p.I369V	0.95	NULL	superfamily_GroES-like;HMMPfam_ADH_zinc_N;HMMPfam_ADH_N;superfamily_NAD(P)-binding Rossmann-fold domains	-	pseudogene
UGT2A1	10941	genome.wustl.edu	36	4	70499620	70499620	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	4	70499620	70499620	C	T	SNP	UGT2A1	NM_006798	human	genbank	54_36p	-1	validated	missense	c.797	p.R266H	1	HMMPfam_UDPGT	HMMPfam_UDPGT;superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
DNAH5	1767	genome.wustl.edu	36	5	13917743	13917743	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	5	13917743	13917743	A	T	SNP	DNAH5	NM_001369	human	genbank	54_36p	-1	validated	nonsense	c.4359	p.C1453*	1	NULL	-	-	no_errors
DNAH5	1767	genome.wustl.edu	36	5	13947789	13947789	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	5	13947789	13947789	C	T	SNP	DNAH5	NM_001369	human	genbank	54_36p	-1	validated	missense	c.2401	p.A801T		NULL	-	-	no_errors
PKHD1	5314	genome.wustl.edu	36	6	51998297	51998297	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	6	51998297	51998297	C	G	SNP	PKHD1	NM_138694	human	genbank	54_36p	-1	reviewed	missense	c.4270	p.D1424H		HMMPfam_TIG	HMMPfam_TIG;superfamily_Pectin lyase-like;superfamily_E set domains;superfamily_Anthrax protective antigen	-	no_errors
LOC441442	441442	genome.wustl.edu	36	9	67848175	67848175	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	9	67848175	67848175	G	T	SNP	LOC441442	XR_037084	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.994	-	-	-	pseudogene
SSBP1	6742	genome.wustl.edu	36	7	141089911	141089911	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	7	141089911	141089911	T	G	SNP	SSBP1	NM_003143	human	genbank	54_36p	1	validated	missense	c.167	p.I56R	1	NULL	-	-	no_errors
TRIM4	89122	genome.wustl.edu	36	7	99327849	99327849	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	7	99327849	99327849	A	G	SNP	TRIM4	NM_033017	human	genbank	54_36p	-1	reviewed	missense	c.1376	p.F459S	1	NULL	-	-	no_errors
LOC100131257	100131257	genome.wustl.edu	36	7	7085167	7085167	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	7	7085167	7085167	C	A	SNP	LOC100131257	XM_001716696	human	genbank	54_36p	-1	model	nonsense	c.562	p.E188*	0.09	NULL	-	-	no_errors
ENSG00000179799	0	genome.wustl.edu	36	3	75489141	75489141	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	3	75489141	75489141	C	G	SNP	ENSG00000179799	ENST00000331736	human	ensembl	54_36p	-1	known	missense	c.139	p.D47H	0.19	NULL	-	-	no_errors
ADHFE1	137872	genome.wustl.edu	36	8	67520078	67520078	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	8	67520078	67520078	C	A	SNP	ADHFE1	NM_144650	human	genbank	54_36p	1	validated	missense	c.425	p.T142N	1	NULL	-	-	no_errors
TRPA1	8989	genome.wustl.edu	36	8	73112841	73112841	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	8	73112841	73112841	A	G	SNP	TRPA1	NM_007332	human	genbank	54_36p	-1	reviewed	silent	c.2316	p.T772	0.81	NULL	-	-	no_errors
IGKV4-1	28908	genome.wustl.edu	36	2	88966564	88966564	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	2	88966564	88966564	G	T	SNP	IGKV4-1	ENST00000390243	human	ensembl	54_36p	1	known	missense	c.143	p.S48I		NULL	-	-	no_stop_codon:bad_bp_length_for_coding_region
ENSG00000204456	0	genome.wustl.edu	36	11	89139788	89139788	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	11	89139788	89139788	A	G	SNP	ENSG00000204456	ENST00000375974	human	ensembl	54_36p	-1	known	missense	c.139	p.S47P		NULL	-	-	no_start_codon:no_stop_codon
IFNA1	3439	genome.wustl.edu	36	9	21430580	21430580	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1413-01A-01W-0494-09	TCGA-24-1413-10A-01W-0495-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	1b2d2cde-4553-472e-82f1-8224745ac1eb	906d4b39-24b4-4bd1-b186-bd92dcfab23e	9	21430580	21430580	A	G	SNP	IFNA1	NM_024013	human	genbank	54_36p	1	provisional	missense	c.74	p.D25G		NULL	-	-	no_errors