Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID C1orf43 25912 hgsc.bcm.edu 36 1 152451668 152451668 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NOMO2 283820 hgsc.bcm.edu 36 16 18427994 18427994 + Silent SNP A A G rs8921 TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NOMO2 283820 hgsc.bcm.edu 36 16 18436033 18436033 + Silent SNP G G T rs393246 TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NOMO2 283820 hgsc.bcm.edu 36 16 18457472 18457472 + Missense_Mutation SNP C C T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NUP210 23225 hgsc.bcm.edu 36 3 13339842 13339842 + Missense_Mutation SNP C C A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c SLC4A7 9497 hgsc.bcm.edu 36 3 27465245 27465245 + Missense_Mutation SNP T T A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c TDG 6996 hgsc.bcm.edu 36 12 102897858 102897859 + Frame_Shift_Ins INS - - A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 - - . . . . Unknown Untested Somatic Phase_III WXS none SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c ADAMTSL3 57188 hgsc.bcm.edu 36 15 82442585 82442585 + Silent SNP A A T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 A A A T A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c HIST1H4E 8367 hgsc.bcm.edu 36 6 26313049 26313049 + Silent SNP G G C novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c IL19 29949 hgsc.bcm.edu 36 1 205082537 205082537 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c LRRC27 80313 hgsc.bcm.edu 36 10 134025046 134025046 + Silent SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c MUC15 143662 hgsc.bcm.edu 36 11 26541255 26541255 + Silent SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NDST2 8509 hgsc.bcm.edu 36 10 75233701 75233701 + Missense_Mutation SNP C C A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c OR5B2 390190 hgsc.bcm.edu 36 11 57946569 57946569 + Missense_Mutation SNP C C T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c PRRX1 5396 hgsc.bcm.edu 36 1 168962105 168962105 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c SLCO1C1 53919 hgsc.bcm.edu 36 12 20759467 20759467 + Missense_Mutation SNP C C A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c TKT 7086 hgsc.bcm.edu 36 3 53238390 53238390 + Missense_Mutation SNP C C T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c TP53 7157 hgsc.bcm.edu 36 17 7517845 7517845 + Missense_Mutation SNP C C T rs28934576 TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c GABBR2 9568 hgsc.bcm.edu 36 9 100256286 100256288 + In_Frame_Del DEL TTG TTG - novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 TTG TTG TTG - TTG TTG Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c GLI3 2737 hgsc.bcm.edu 36 7 42031491 42031491 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c MYH4 4622 hgsc.bcm.edu 36 17 10298821 10298821 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G A A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c MYO1A 4640 hgsc.bcm.edu 36 12 55717073 55717073 + Nonsense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NOTCH2 4853 hgsc.bcm.edu 36 1 120262689 120262689 + Missense_Mutation SNP C C T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NTRK1 4914 hgsc.bcm.edu 36 1 155118005 155118005 + Missense_Mutation SNP C C G novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c NTRK3 4916 hgsc.bcm.edu 36 15 86224606 86224606 + Missense_Mutation SNP G G A novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c SMARCA2 6595 hgsc.bcm.edu 36 9 2044620 2044620 + Missense_Mutation SNP G G T novel TCGA-24-1558-01A-01W-0615-10 TCGA-24-1558-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID 2e06de96-fd7c-4630-b8f8-a77bf08b624e 6eb8ac17-31b7-4902-9ef5-9f4da477856c