Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID C1orf201 90529 broad.mit.edu 36 1 24572784 24572784 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SLC1A7 6512 broad.mit.edu 36 1 53328074 53328074 + Silent SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 S1PR1 1901 broad.mit.edu 36 1 101477260 101477260 + Missense_Mutation SNP C C A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ADAM30 11085 broad.mit.edu 36 1 120239173 120239173 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 FLG2 388698 broad.mit.edu 36 1 150590300 150590300 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 FAM189B 10712 broad.mit.edu 36 1 153484651 153484651 + Silent SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GON4L 54856 broad.mit.edu 36 1 154002179 154002179 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 NTRK1 4914 broad.mit.edu 36 1 155115677 155115677 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 NUAK2 81788 broad.mit.edu 36 1 203539966 203539966 + Silent SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MIA3 375056 broad.mit.edu 36 1 220905509 220905509 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 URB2 9816 broad.mit.edu 36 1 227839846 227839846 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 LYST 1130 broad.mit.edu 36 1 234038960 234038960 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PLD5 200150 broad.mit.edu 36 1 240330665 240330665 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 OR2T12 127064 broad.mit.edu 36 1 246525061 246525061 + Missense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ZNF25 219749 broad.mit.edu 36 10 38281644 38281644 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PRKG1 5592 broad.mit.edu 36 10 53492301 53492301 + Splice_Site SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 EGR2 1959 broad.mit.edu 36 10 64243747 64243747 + Silent SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MGEA5 10724 broad.mit.edu 36 10 103540644 103540644 + Missense_Mutation SNP T T A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 DHX32 55760 broad.mit.edu 36 10 127516868 127516868 + Missense_Mutation SNP C C A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PAX6 5080 broad.mit.edu 36 11 31772909 31772909 + Missense_Mutation SNP C C A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 OR5T1 390155 broad.mit.edu 36 11 55800656 55800656 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 FAM111B 374393 broad.mit.edu 36 11 58649831 58649831 + Nonsense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MS4A5 64232 broad.mit.edu 36 11 59957856 59957856 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GANAB 23193 broad.mit.edu 36 11 62154461 62154461 + Silent SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 LGALS12 85329 broad.mit.edu 36 11 63032877 63032877 + Silent SNP C C A rs12289952 byHapMap TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SF3B2 10992 broad.mit.edu 36 11 65584674 65584674 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 DYNC2H1 79659 broad.mit.edu 36 11 102575379 102575379 + Silent SNP A A G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 NCAPD2 9918 broad.mit.edu 36 12 6505594 6505594 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 APOLD1 81575 broad.mit.edu 36 12 12831529 12831529 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PIK3C2G 5288 broad.mit.edu 36 12 18549513 18549513 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 IRAK4 51135 broad.mit.edu 36 12 42448338 42448338 + Missense_Mutation SNP A A G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TBX5 6910 broad.mit.edu 36 12 113278154 113278154 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 UBAC2 337867 broad.mit.edu 36 13 98764371 98764371 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 G2E3 55632 broad.mit.edu 36 14 30151266 30151266 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 EVL 51466 broad.mit.edu 36 14 99673694 99673694 + Missense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PLA2G4F 255189 broad.mit.edu 36 15 40229338 40229338 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 UBE2Q2 92912 broad.mit.edu 36 15 73978838 73978838 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 UNC45A 55898 broad.mit.edu 36 15 89293649 89293649 + Missense_Mutation SNP A A G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 KIFC3 3801 broad.mit.edu 36 16 56357032 56357032 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ZFP1 162239 broad.mit.edu 36 16 73761359 73761359 + Missense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TP53 7157 broad.mit.edu 36 17 7519221 7519221 + Missense_Mutation SNP A A C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A C C A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GLP2R 9340 broad.mit.edu 36 17 9731991 9731991 + Silent SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 KIAA0100 9703 broad.mit.edu 36 17 23986322 23986322 + Missense_Mutation SNP T T A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 EPB41L3 23136 broad.mit.edu 36 18 5396870 5396870 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 KIAA1012 22878 broad.mit.edu 36 18 27689653 27689653 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 HPN 3249 broad.mit.edu 36 19 40248371 40248371 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SPTBN4 57731 broad.mit.edu 36 19 45695272 45695272 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 VSNL1 7447 broad.mit.edu 36 2 17636864 17636864 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 LAPTM4A 9741 broad.mit.edu 36 2 20104232 20104232 + Missense_Mutation SNP T T G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 DPYSL5 56896 broad.mit.edu 36 2 27003805 27003805 + Splice_Site SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 USP34 9736 broad.mit.edu 36 2 61392182 61392182 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 CSRNP3 80034 broad.mit.edu 36 2 166222658 166222658 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TTN 7273 broad.mit.edu 36 2 179320783 179320783 + Silent SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 NBEAL1 65065 broad.mit.edu 36 2 203709031 203709031 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 C2orf67 151050 broad.mit.edu 36 2 210601925 210601925 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PROKR2 128674 broad.mit.edu 36 20 5242763 5242763 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PLCB1 23236 broad.mit.edu 36 20 8653336 8653336 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PRSS7 5651 broad.mit.edu 36 21 18647201 18647201 + Missense_Mutation SNP C C A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MORC3 23515 broad.mit.edu 36 21 36658405 36658405 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GAB4 128954 broad.mit.edu 36 22 15825730 15825730 + Missense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 RAB36 9609 broad.mit.edu 36 22 21822252 21822252 + Nonsense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GRAMD1C 54762 broad.mit.edu 36 3 115117258 115117258 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 CDGAP 57514 broad.mit.edu 36 3 120595050 120595050 + Silent SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 C3orf15 89876 broad.mit.edu 36 3 120917218 120917218 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 CASR 846 broad.mit.edu 36 3 123485524 123485524 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MCM2 4171 broad.mit.edu 36 3 128807766 128807766 + Silent SNP C C A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SLC9A9 285195 broad.mit.edu 36 3 144468407 144468407 + Missense_Mutation SNP T T G rs2289491 byCluster;byFrequency;bySubmitter;byHapMap TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 COL25A1 84570 broad.mit.edu 36 4 110003986 110003986 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ADAMTS12 81792 broad.mit.edu 36 5 33679330 33679330 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PCDHB2 56133 broad.mit.edu 36 5 140454591 140454591 + Silent SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 FAT2 2196 broad.mit.edu 36 5 150900507 150900507 + Silent SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SH3PXD2B 285590 broad.mit.edu 36 5 171698702 171698702 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 HIST1H3C 8352 broad.mit.edu 36 6 26153624 26153624 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ZKSCAN4 387032 broad.mit.edu 36 6 28320943 28320943 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MRPS18B 28973 broad.mit.edu 36 6 30698627 30698627 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TCTE1 202500 broad.mit.edu 36 6 44362100 44362100 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 GPR110 266977 broad.mit.edu 36 6 47085986 47085986 + Missense_Mutation SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TINAG 27283 broad.mit.edu 36 6 54320270 54320270 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ZNF292 23036 broad.mit.edu 36 6 88023857 88023857 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MDN1 23195 broad.mit.edu 36 6 90442620 90442620 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TNRC18 84629 broad.mit.edu 36 7 5383118 5383118 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ADAM22 53616 broad.mit.edu 36 7 87598675 87598675 + Silent SNP T T C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MOSPD3 64598 broad.mit.edu 36 7 100050739 100050739 + Silent SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ZAN 7455 broad.mit.edu 36 7 100215053 100215053 + Nonsense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MGAM 8972 broad.mit.edu 36 7 141368668 141368668 + Missense_Mutation SNP A A G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A G G A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 KRBA1 84626 broad.mit.edu 36 7 149049527 149049527 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SNTG1 54212 broad.mit.edu 36 8 51611798 51611798 + Nonsense_Mutation SNP T T A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 RGS20 8601 broad.mit.edu 36 8 55033562 55033562 + Silent SNP T T C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PRDM14 63978 broad.mit.edu 36 8 71141225 71141225 + Missense_Mutation SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 KCNB2 9312 broad.mit.edu 36 8 74011716 74011716 + Silent SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 RGS22 26166 broad.mit.edu 36 8 101144951 101144951 + Nonsense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 DMRT3 58524 broad.mit.edu 36 9 980347 980347 + Missense_Mutation SNP T T A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 ARID3C 138715 broad.mit.edu 36 9 34612527 34612527 + Splice_Site SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 CA9 768 broad.mit.edu 36 9 35669329 35669329 + Missense_Mutation SNP G G T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 FRMPD1 22844 broad.mit.edu 36 9 37722367 37722367 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 SVEP1 79987 broad.mit.edu 36 9 112316053 112316053 + Missense_Mutation SNP A A C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PAPPA 5069 broad.mit.edu 36 9 118179697 118179697 + Missense_Mutation SNP C C G novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PPP6C 5537 broad.mit.edu 36 9 126956018 126956018 + Silent SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 EGFL7 51162 broad.mit.edu 36 9 138686547 138686547 + Silent SNP G G A novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 MORC4 79710 broad.mit.edu 36 X 106116087 106116087 + Splice_Site SNP C C T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 PAK3 5063 broad.mit.edu 36 X 110346422 110346422 + Missense_Mutation SNP T T C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 T T C C T T Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 TKTL1 8277 broad.mit.edu 36 X 153202398 153202398 + Missense_Mutation SNP G G C novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 F8 2157 broad.mit.edu 36 X 153880954 153880954 + Missense_Mutation SNP A A T novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95 CD163L1 283316 broad.mit.edu 36 12 7418493 7418512 + Frame_Shift_Del DEL CACACCACGTGGGCATCGCT - CACACCACGTGGGCATCGCT novel none TCGA-25-1313-01A-01W-0492-08 TCGA-25-1313-10A-01W-0492-08 CACACCACGTGGGCATCGCT CACACCACGTGGGCATCGCT - - CACACCACGTGGGCATCGCT CACACCACGTGGGCATCGCT Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx 500e327c-04ed-470b-9385-5cc070030525 bd93f362-b23a-41b7-8ad4-478cf8b18c95