Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID MTOR 2475 broad.mit.edu 36 1 11241933 11241933 + Missense_Mutation SNP C C A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C A A C C Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 ZRANB2 9406 broad.mit.edu 36 1 71305075 71305075 + Nonsense_Mutation SNP T T A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 WDR63 126820 broad.mit.edu 36 1 85311356 85311356 + Missense_Mutation SNP G G C novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 PHGDH 26227 broad.mit.edu 36 1 120086007 120086007 + Silent SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 ITGB1 3688 broad.mit.edu 36 10 33249239 33249239 + Silent SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 MRGPRE 116534 broad.mit.edu 36 11 3206566 3206566 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 C11orf65 160140 broad.mit.edu 36 11 107783049 107783049 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 GRIK4 2900 broad.mit.edu 36 11 120281358 120281358 + Silent SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 NINJ2 4815 broad.mit.edu 36 12 544825 544825 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 CD163L1 283316 broad.mit.edu 36 12 7422901 7422901 + Nonsense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 GLIPR1L2 144321 broad.mit.edu 36 12 74102998 74102998 + Missense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 TMEM132D 121256 broad.mit.edu 36 12 128125002 128125002 + Nonsense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 C13orf23 80209 broad.mit.edu 36 13 38485390 38485390 + Missense_Mutation SNP T T C novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 ANGEL1 23357 broad.mit.edu 36 14 76345445 76345445 + Missense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 DIO3 1735 broad.mit.edu 36 14 101098050 101098050 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 SRL 6345 broad.mit.edu 36 16 4194548 4194548 + Silent SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 MIB1 57534 broad.mit.edu 36 18 17649662 17649662 + Missense_Mutation SNP T T G novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 KCNS3 3790 broad.mit.edu 36 2 17976259 17976259 + Missense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 TTN 7273 broad.mit.edu 36 2 179349789 179349789 + Nonsense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture;Sequenom Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 ATP9A 10079 broad.mit.edu 36 20 49657506 49657506 + Missense_Mutation SNP A A C novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 A A C C A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 EPHB1 2047 broad.mit.edu 36 3 136334264 136334264 + Missense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 MFAP3L 9848 broad.mit.edu 36 4 171149977 171149977 + Missense_Mutation SNP G G T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 SLC6A18 348932 broad.mit.edu 36 5 1285360 1285360 + Missense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 PRDM9 56979 broad.mit.edu 36 5 23562102 23562102 + Missense_Mutation SNP C C G novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C G G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 ZFP57 346171 broad.mit.edu 36 6 29748583 29748583 + Silent SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 C6orf27 80737 broad.mit.edu 36 6 31842069 31842069 + Silent SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 CENPQ 55166 broad.mit.edu 36 6 49556675 49556675 + Missense_Mutation SNP T T G novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 CHN2 1124 broad.mit.edu 36 7 29513396 29513396 + Missense_Mutation SNP A A T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 RSBN1L 222194 broad.mit.edu 36 7 77163736 77163736 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 TNFRSF10A 8797 broad.mit.edu 36 8 23116183 23116183 + Missense_Mutation SNP C C T novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 MCART1 92014 broad.mit.edu 36 9 37878379 37878379 + Nonsense_Mutation SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 PRPF4 9128 broad.mit.edu 36 9 115093655 115093655 + Missense_Mutation SNP T T A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture;Sequenom Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 COL5A1 1289 broad.mit.edu 36 9 136856317 136856317 + Silent SNP G G A novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 TP53 7157 broad.mit.edu 36 17 7520272 7520272 + Frame_Shift_Del DEL G G - novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 G G - - G G Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40 CEACAM18 729767 broad.mit.edu 36 19 56675630 56675631 + Frame_Shift_Del DEL AC - AC novel none TCGA-25-1329-01A-01W-0492-08 TCGA-25-1329-10A-01W-0492-08 AC AC - - AC AC Unknown Valid Somatic Phase_I Capture Illumina_Capture Illumina GAIIx f73b35f8-ecc3-4203-a79c-d5dfa657c29a acebe8bf-8bb2-4a42-8a1a-5e3859e3aa40