Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID PTPRF 5792 broad.mit.edu 36 1 43847746 43847746 + Nonsense_Mutation SNP C C G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SYT11 23208 broad.mit.edu 36 1 154104980 154104980 + Missense_Mutation SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a NEBL 10529 broad.mit.edu 36 10 21174197 21174197 + Missense_Mutation SNP C C T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SVIL 6840 broad.mit.edu 36 10 29861015 29861015 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a IFIT2 3433 broad.mit.edu 36 10 91056285 91056285 + Missense_Mutation SNP C C G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a OR51B6 390058 broad.mit.edu 36 11 5329645 5329645 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a OAS2 4939 broad.mit.edu 36 12 111927340 111927340 + Missense_Mutation SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a TM6SF1 53346 broad.mit.edu 36 15 81596364 81596364 + Missense_Mutation SNP C C T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a ZP2 7783 broad.mit.edu 36 16 21130366 21130366 + Missense_Mutation SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a TP53 7157 broad.mit.edu 36 17 7518933 7518933 + Missense_Mutation SNP T T C novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a NLRP12 91662 broad.mit.edu 36 19 58993342 58993342 + Missense_Mutation SNP A A T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a ALMS1 7840 broad.mit.edu 36 2 73530813 73530813 + Silent SNP A A G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 A A G G A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SLC4A10 57282 broad.mit.edu 36 2 162515553 162515553 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a TTN 7273 broad.mit.edu 36 2 179218999 179218999 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SCG2 7857 broad.mit.edu 36 2 224170895 224170895 + Silent SNP C C T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a YWHAB 7529 broad.mit.edu 36 20 42966059 42966059 + Missense_Mutation SNP C C G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a IQCF3 401067 broad.mit.edu 36 3 51839526 51839526 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SNTN 132203 broad.mit.edu 36 3 63624748 63624748 + Silent SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a GABRR3 200959 broad.mit.edu 36 3 99214060 99214060 + Silent SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a AMBN 258 broad.mit.edu 36 4 71497332 71497332 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Sequenom;Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a AGXT2L1 64850 broad.mit.edu 36 4 109888619 109888619 + Missense_Mutation SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a KIF4B 285643 broad.mit.edu 36 5 154375434 154375434 + Missense_Mutation SNP C C G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a SYNGAP1 8831 broad.mit.edu 36 6 33519423 33519423 + Missense_Mutation SNP T T C novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a KCTD20 222658 broad.mit.edu 36 6 36557492 36557492 + Silent SNP A A T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 A A T T A A Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a ZNF318 24149 broad.mit.edu 36 6 43433287 43433287 + Missense_Mutation SNP C C T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C T T C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a FAM83B 222584 broad.mit.edu 36 6 54914497 54914497 + Silent SNP T T G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T G G T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a COL12A1 1303 broad.mit.edu 36 6 75890707 75890707 + Silent SNP T T C novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T C C T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a WIPI2 26100 broad.mit.edu 36 7 5205797 5205797 + Missense_Mutation SNP G G C novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G C C G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a OGDH 4967 broad.mit.edu 36 7 44704337 44704337 + Missense_Mutation SNP C C A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C A A C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a UNC5D 137970 broad.mit.edu 36 8 35736450 35736450 + Missense_Mutation SNP G G T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a CHMP4C 92421 broad.mit.edu 36 8 82830160 82830160 + Missense_Mutation SNP G G A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G A A G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a VPS13B 157680 broad.mit.edu 36 8 100901489 100901489 + Missense_Mutation SNP T T A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a CACNA1B 774 broad.mit.edu 36 9 140074012 140074012 + Missense_Mutation SNP T T A novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 T T A A T T Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a CXorf38 159013 broad.mit.edu 36 X 40381332 40381332 + Missense_Mutation SNP C C G novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 C C G G C C Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a ZMYM3 9203 broad.mit.edu 36 X 70382597 70382597 + Nonsense_Mutation SNP G G T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a POU3F4 5456 broad.mit.edu 36 X 82650625 82650625 + Missense_Mutation SNP G G T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a ARD1A 8260 broad.mit.edu 36 X 152848718 152848718 + Missense_Mutation SNP G G T novel none TCGA-25-2404-01A-01W-0799-08 TCGA-25-2404-10A-01W-0799-08 G G T T G G Unknown Valid Somatic Phase_I Capture Capture Illumina GAIIx 3701f036-7d05-496d-ad95-a6bbf82d2495 8882dd33-ce2a-4ddb-94bc-763543e8872a