Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ATP6V1C2 245973 hgsc.bcm.edu 36 2 10821976 10821976 + Missense_Mutation SNP G G A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca AOC2 314 hgsc.bcm.edu 36 17 38251215 38251216 + Frame_Shift_Ins INS - - G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 - - . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca C18orf1 753 hgsc.bcm.edu 36 18 13611197 13611197 + Missense_Mutation SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca CLDN11 5010 hgsc.bcm.edu 36 3 171619588 171619588 + Missense_Mutation SNP A A T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca FBXO31 79791 hgsc.bcm.edu 36 16 85951471 85951471 + Missense_Mutation SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca GOLGA4 2803 hgsc.bcm.edu 36 3 37298467 37298467 + Missense_Mutation SNP G G T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca HDAC4 9759 hgsc.bcm.edu 36 2 239750469 239750469 + Missense_Mutation SNP T T G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 T T . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca HTR2A 3356 hgsc.bcm.edu 36 13 46307727 46307727 + Missense_Mutation SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca MAD2L2 10459 hgsc.bcm.edu 36 1 11658751 11658751 + Frame_Shift_Del DEL C C - novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca SMOC2 64094 hgsc.bcm.edu 36 6 168793369 168793369 + Missense_Mutation SNP C C A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca SMTN 6525 hgsc.bcm.edu 36 22 29817798 29817799 + Frame_Shift_Ins INS - - C novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 - - . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca WNT11 7481 hgsc.bcm.edu 36 11 75575791 75575791 + Missense_Mutation SNP C C T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C . . . . Unknown Untested Somatic Phase_III WXS none SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca ADAM9 8754 hgsc.bcm.edu 36 8 39048016 39048016 + Missense_Mutation SNP C C A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C A A C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca AP1G1 164 hgsc.bcm.edu 36 16 70330380 70330380 + Missense_Mutation SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca CSRP1 1465 hgsc.bcm.edu 36 1 199725932 199725932 + Missense_Mutation SNP G G C novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca DUSP19 142679 hgsc.bcm.edu 36 2 183668515 183668515 + Missense_Mutation SNP G G C novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G C G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca GC 2638 hgsc.bcm.edu 36 4 72848029 72848029 + Missense_Mutation SNP A A T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A A T A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca GCNT2 2651 hgsc.bcm.edu 36 6 10665269 10665269 + Silent SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca KIF17 57576 hgsc.bcm.edu 36 1 20886897 20886897 + Silent SNP C C T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca MC2R 4158 hgsc.bcm.edu 36 18 13874979 13874979 + Missense_Mutation SNP G G A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca NPC1L1 29881 hgsc.bcm.edu 36 7 44526890 44526890 + Silent SNP T T C novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 T T T C T T Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca NPHS1 4868 hgsc.bcm.edu 36 19 41025145 41025145 + Missense_Mutation SNP G G A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca NR2C2AP 126382 hgsc.bcm.edu 36 19 19174199 19174199 + Missense_Mutation SNP C C T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca PDE4DIP 9659 hgsc.bcm.edu 36 1 143577954 143577954 + Missense_Mutation SNP C C G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca RALGPS1 9649 hgsc.bcm.edu 36 9 128997191 128997191 + Missense_Mutation SNP G G T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G T G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca TAS2R42 353164 hgsc.bcm.edu 36 12 11230144 11230144 + Missense_Mutation SNP C C G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C G C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca TIPRL 261726 hgsc.bcm.edu 36 1 166432504 166432504 + Silent SNP G G A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 G G G A G G Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca TP53 7157 hgsc.bcm.edu 36 17 7517845 7517845 + Missense_Mutation SNP C C T rs28934576 TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS 454_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca HS1BP3 64342 hgsc.bcm.edu 36 2 20682472 20682472 + Nonsense_Mutation SNP A A T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A A T A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca KDM5C 8242 hgsc.bcm.edu 36 X 53263171 53263171 + Missense_Mutation SNP C C T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C T T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca KHDRBS2 202559 hgsc.bcm.edu 36 6 63053769 63053769 + Missense_Mutation SNP T T G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 T T T G T T Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca PLXDC2 84898 hgsc.bcm.edu 36 10 20472311 20472311 + Missense_Mutation SNP C C T novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C T C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca STK10 6793 hgsc.bcm.edu 36 5 171424401 171424401 + Missense_Mutation SNP C C A novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 C C C A C C Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca ZNF33A 7581 hgsc.bcm.edu 36 10 38384539 38384539 + Missense_Mutation SNP A A G novel TCGA-36-1575-01A-01W-0615-10 TCGA-36-1575-10A-01W-0615-10 A A A G A A Unknown Valid Somatic Phase_III WXS Sanger_PCR_WGA SOLID d1dac91f-f98e-4271-a3aa-ce7b50ab5e3c ff9e47fa-c8b6-4005-b0ba-c9abf59752ca