Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error LOC100133915 0 genome.wustl.edu 36 8 1589302 1589302 + Missense_Mutation SNP G A A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 8 1589302 1589302 G A SNP LOC100133915 XM_001715423 human genbank 54_36p -1 model missense c.2450 p.P817L 0.000 NULL NULL - no_start_codon:pseudogene:no_stop_codon MYH2 4620 genome.wustl.edu 36 17 10372934 10372934 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 17 10372934 10372934 C T SNP MYH2 NM_001100112 human genbank 54_36p -1 validated missense c.3542 p.R1181H 1.000 HMMPfam_Myosin_tail_1 HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1 - no_errors ZNF622 90441 genome.wustl.edu 36 5 16516842 16516842 + Missense_Mutation SNP T T C novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 5 16516842 16516842 T C SNP ZNF622 NM_033414 human genbank 54_36p -1 provisional missense c.635 p.D212G 1.000 NULL HMMSmart_ZnF_U1,HMMSmart_ZnF_C2H2 - no_errors LOC728672 728672 genome.wustl.edu 36 12 19500973 19500973 + RNA SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 12 19500973 19500973 C T SNP LOC728672 XR_015580 human genbank 54_36p -1 model rna NULL NULL 1.000 - - - pseudogene SLIT2 9353 genome.wustl.edu 36 4 20164645 20164645 + Missense_Mutation SNP A A G novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 4 20164645 20164645 A G SNP SLIT2 NM_004787 human genbank 54_36p +1 provisional missense c.2681 p.D894G 1.000 HMMSmart_SM00082,HMMPfam_LRRCT superfamily_L domain-like,HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_LRRCT,HMMSmart_SM00365,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_SM00274,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00041,PatternScan_CTCK_1 - no_errors NEBL 10529 genome.wustl.edu 36 10 21225908 21225908 + Silent SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 10 21225908 21225908 C T SNP NEBL NM_006393 human genbank 54_36p -1 validated silent c.138 p.T46 0.003 HMMSmart_SM00227,HMMPfam_Nebulin HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326 - no_errors ATP12A 479 genome.wustl.edu 36 13 24174176 24174176 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 13 24174176 24174176 G A SNP ATP12A NM_001676 human genbank 54_36p +1 reviewed missense c.1985 p.R662H 1.000 superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C - no_errors PHF12 57649 genome.wustl.edu 36 17 24301338 24301338 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 17 24301338 24301338 C T SNP PHF12 NM_001033561 human genbank 54_36p -1 validated missense c.119 p.S40N 1.000 NULL superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SMAD/FHA domain - no_errors KIAA0319 9856 genome.wustl.edu 36 6 24680814 24680814 + Missense_Mutation SNP G G T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 6 24680814 24680814 G T SNP KIAA0319 NM_014809 human genbank 54_36p -1 validated missense c.1826 p.S609Y 0.993 superfamily_PKD domain,HMMSmart_SM00089,HMMSmart_SM00060 HMMSmart_SM00765,HMMSmart_SM00060,HMMSmart_SM00089,superfamily_PKD domain - no_errors C20orf112 140688 genome.wustl.edu 36 20 30503804 30503804 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 20 30503804 30503804 G A SNP C20orf112 NM_080616 human genbank 54_36p -1 validated missense c.986 p.P329L 1.000 NULL PatternScan_ILVD_EDD_1 - no_errors LOC644390 644390 genome.wustl.edu 36 15 32569804 32569804 + RNA SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 15 32569804 32569804 C T SNP LOC644390 XR_016623 human genbank 54_36p -1 model rna NULL NULL 0.994 - - - pseudogene ZNF642 339559 genome.wustl.edu 36 1 40733417 40733417 + Missense_Mutation SNP G G T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 1 40733417 40733417 G T SNP ZNF642 NM_198494 human genbank 54_36p +1 validated missense c.680 p.G227V 0.002 NULL superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1 - no_errors NPHS1 4868 genome.wustl.edu 36 19 41014089 41014089 + Silent SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 19 41014089 41014089 G A SNP NPHS1 NM_004646 human genbank 54_36p -1 validated silent c.3336 p.N1112 0.996 NULL HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3 - no_errors C6orf154 221424 genome.wustl.edu 36 6 43585418 43585418 + Silent SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 6 43585418 43585418 G A SNP C6orf154 NM_001012974 human genbank 54_36p -1 predicted silent c.84 p.N28 1.000 superfamily_SSF52047 superfamily_SSF52047 - no_errors TTLL6 284076 genome.wustl.edu 36 17 44202346 44202346 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 17 44202346 44202346 G A SNP TTLL6 NM_173623 human genbank 54_36p -1 validated missense c.1187 p.T396M 0.000 NULL HMMPfam_TTL - no_errors ABCC3 8714 genome.wustl.edu 36 17 46097573 46097573 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 17 46097573 46097573 G A SNP ABCC3 NM_003786 human genbank 54_36p +1 reviewed missense c.1399 p.G467R 0.999 superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1 - no_errors CKAP5 9793 genome.wustl.edu 36 11 46738823 46738823 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 11 46738823 46738823 C T SNP CKAP5 NM_001008938 human genbank 54_36p -1 validated missense c.4309 p.E1437K 1.000 NULL superfamily_ARM repeat,HMMPfam_HEAT - no_errors TFAP2B 7021 genome.wustl.edu 36 6 50919057 50919057 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 6 50919057 50919057 G A SNP TFAP2B NM_003221 human genbank 54_36p +1 reviewed missense c.1376 p.R459K 1.000 NULL HMMPfam_TF_AP-2 - no_errors LPCAT2 54947 genome.wustl.edu 36 16 54137215 54137215 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 16 54137215 54137215 G A SNP LPCAT2 NM_017839 human genbank 54_36p +1 reviewed missense c.920 p.R307Q 1.000 superfamily_Glycerol-3-phosphate (1)-acyltransferase superfamily_Glycerol-3-phosphate (1)-acyltransferase,HMMPfam_Acyltransferase,HMMSmart_SM00563,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1 - no_errors FAM120C 54954 genome.wustl.edu 36 X 54225731 54225731 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 X 54225731 54225731 G A SNP FAM120C NM_017848 human genbank 54_36p -1 validated missense c.626 p.P209L 1.000 NULL NULL - no_errors CLPX 10845 genome.wustl.edu 36 15 63258391 63258391 + Missense_Mutation SNP T T C novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 T T Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 15 63258391 63258391 T C SNP CLPX NM_006660 human genbank 54_36p -1 provisional missense c.292 p.K98E 1.000 NULL superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA_2,HMMSmart_SM00382,HMMPfam_ClpB_D2-small - no_errors PARP16 54956 genome.wustl.edu 36 15 63346067 63346067 + Silent SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 15 63346067 63346067 G A SNP PARP16 NM_017851 human genbank 54_36p -1 provisional silent c.405 p.N135 0.968 HMMPfam_PARP,superfamily_SSF56399 HMMPfam_PARP,superfamily_SSF56399 - no_errors LOC728807 728807 genome.wustl.edu 36 4 69175213 69175213 + RNA SNP G G C novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 4 69175213 69175213 G C SNP LOC728807 XR_042341 human genbank 54_36p -1 model rna NULL NULL 0.999 - - - pseudogene SIPA1L1 26037 genome.wustl.edu 36 14 71270197 71270197 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 14 71270197 71270197 G A SNP SIPA1L1 NM_015556 human genbank 54_36p +1 provisional missense c.4986 p.M1662I 1.000 NULL superfamily_Rap/Ran-GAP (Pfam 02145),HMMPfam_Rap_GAP,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228 - no_errors LOC646127 0 genome.wustl.edu 36 X 74464465 74464465 + RNA SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 X 74464465 74464465 C T SNP LOC646127 XR_037591 human genbank 54_36p -1 model rna NULL NULL 0.003 - - - pseudogene TMEM45A 55076 genome.wustl.edu 36 3 101756851 101756851 + Silent SNP C C A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 3 101756851 101756851 C A SNP TMEM45A NM_018004 human genbank 54_36p +1 provisional silent c.106 p.R36 0.416 NULL HMMPfam_DUF716 - no_errors PKD2L1 9033 genome.wustl.edu 36 10 102047279 102047279 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 10 102047279 102047279 C T SNP PKD2L1 NM_016112 human genbank 54_36p -1 reviewed missense c.806 p.G269D 1.000 HMMPfam_PKD_channel HMMPfam_PKD_channel,superfamily_Voltage-gated potassium channels - no_errors GUCY2F 2986 genome.wustl.edu 36 X 108534317 108534317 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 X 108534317 108534317 C T SNP GUCY2F NM_001522 human genbank 54_36p -1 reviewed missense c.2021 p.R674Q 1.000 superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220 superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1 - no_errors TBX3 6926 genome.wustl.edu 36 12 113596948 113596948 + Missense_Mutation SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 12 113596948 113596948 G A SNP TBX3 NM_016569 human genbank 54_36p -1 reviewed missense c.1175 p.A392V 0.993 NULL superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2 - no_errors CCDC62 84660 genome.wustl.edu 36 12 121842573 121842573 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 12 121842573 121842573 C T SNP CCDC62 NM_201435 human genbank 54_36p +1 validated missense c.724 p.R242C 1.000 NULL NULL - no_errors C10orf92 54777 genome.wustl.edu 36 10 134473918 134473918 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 10 134473918 134473918 C T SNP C10orf92 ENST00000263170 human ensembl 54_36p -1 known missense c.2132 p.R711Q 0.001 NULL NULL - no_errors LHX3 8022 genome.wustl.edu 36 9 138229336 138229336 + Missense_Mutation SNP C C G novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 9 138229336 138229336 C G SNP LHX3 NM_014564 human genbank 54_36p -1 reviewed missense c.865 p.G289R 1.000 NULL superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1 - no_errors PCDHA5 56143 genome.wustl.edu 36 5 140183098 140183098 + Silent SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 5 140183098 140183098 G A SNP PCDHA5 NM_018908 human genbank 54_36p +1 reviewed silent c.1554 p.A518 0.959 superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112 HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin - no_errors TIMD4 91937 genome.wustl.edu 36 5 156311135 156311135 + Silent SNP G G A novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 5 156311135 156311135 G A SNP TIMD4 NM_138379 human genbank 54_36p -1 provisional silent c.645 p.P215 0.000 NULL HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409 - no_errors BRP44 25874 genome.wustl.edu 36 1 166155909 166155909 + Silent SNP A A G novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 A A Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 1 166155909 166155909 A G SNP BRP44 NM_015415 human genbank 54_36p -1 validated silent c.279 p.N93 1.000 HMMPfam_UPF0041 HMMPfam_UPF0041 - no_errors MYOC 4653 genome.wustl.edu 36 1 169872361 169872361 + Missense_Mutation SNP G G T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 G G Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 1 169872361 169872361 G T SNP MYOC NM_000261 human genbank 54_36p -1 reviewed missense c.842 p.T281N 0.776 HMMPfam_OLF,HMMSmart_SM00284 HMMPfam_OLF,HMMSmart_SM00284 - no_errors ANKZF1 55139 genome.wustl.edu 36 2 219807893 219807893 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 2 219807893 219807893 C T SNP ANKZF1 NM_001042410 human genbank 54_36p +1 validated missense c.1306 p.R436W 0.994 NULL HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank - no_errors HHIPL2 79802 genome.wustl.edu 36 1 220783727 220783727 + Missense_Mutation SNP C C T novel unknown TCGA-42-2588-01A-01D-1526-09 TCGA-42-2588-10A-01D-1526-09 C C Unknown Unknown Somatic 4 Capture 1 dbGAP Illumina GAIIx fe72ab5e-2866-497a-b5b6-a5aad0378fcb 25fdeeac-887c-4d77-9201-06af483c7525 1 220783727 220783727 C T SNP HHIPL2 NM_024746 human genbank 54_36p -1 validated missense c.749 p.R250H 1.000 superfamily_Quino_gluc_DH superfamily_Quino_gluc_DH - no_errors