Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
PCDHA8	0	broad.mit.edu	37	5	140222517	140222517	+	Silent	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr5:140222517G>A	ENST00000531613.1	+	1	1611	c.1611G>A	c.(1609-1611)gcG>gcA	p.A537A	PCDHA1_ENST00000394633.3_Intron|PCDHA8_ENST00000378123.3_Silent_p.A537A|PCDHA1_ENST00000504120.2_Intron|PCDHA4_ENST00000530339.1_Intron|PCDHA5_ENST00000529859.1_Intron|PCDHA5_ENST00000529619.1_Intron|PCDHA6_ENST00000529310.1_Intron|PCDHA6_ENST00000527624.1_Intron|PCDHA2_ENST00000526136.1_Intron|PCDHA7_ENST00000525929.1_Intron|PCDHA3_ENST00000522353.2_Intron|PCDHA4_ENST00000512229.2_Intron	NM_018911.2	NP_061734.1														NS(2)|breast(3)|endometrium(11)|haematopoietic_and_lymphoid_tissue(2)|kidney(3)|large_intestine(10)|lung(31)|ovary(2)|prostate(2)|skin(4)|stomach(2)|upper_aerodigestive_tract(6)	78			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			AGGTGAGCGCGCGCGACGCGG	0.667000													12	128					0	0	1	0	0
OR8H1	219469	broad.mit.edu	37	11	56058345	56058345	+	Missense_Mutation	SNP	T	T	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:56058345T>G	ENST00000313022.2	-	1	221	c.194A>C	c.(193-195)cAc>cCc	p.H65P		NM_001005199.1	NP_001005199.1	Q8NGG4	OR8H1_HUMAN	olfactory receptor, family 8, subfamily H, member 1	65					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			NS(2)|breast(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(9)|lung(18)|ovary(1)|pancreas(1)|prostate(3)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	43	Esophageal squamous(21;0.00448)					AAATGACAAGTGAGTAAGGAA	0.423000													21	328					0	0	1	0	0
ACTN3	89	broad.mit.edu	37	11	66321555	66321555	+	RNA	SNP	T	T	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:66321555T>A	ENST00000513398.1	+	0	519				ACTN3_ENST00000502692.1_RNA	NM_001104.2	NP_001095.1	Q08043	ACTN3_HUMAN	actinin, alpha 3 (gene/pseudogene)						focal adhesion assembly|muscle filament sliding|regulation of apoptosis	actin filament|cytosol|focal adhesion|pseudopodium	actin binding|calcium ion binding|integrin binding|protein homodimerization activity|structural constituent of muscle			breast(1)|endometrium(4)|kidney(1)|large_intestine(2)|lung(2)	10						CTGGGCATGATCTGGACCATC	0.567000													5	43					0	0	1	0	0
CLPB	81570	broad.mit.edu	37	11	72040797	72040797	+	Missense_Mutation	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:72040797G>A	ENST00000294053.3	-	7	1090	c.917C>T	c.(916-918)gCc>gTc	p.A306V	CLPB_ENST00000340729.5_Missense_Mutation_p.A247V|CLPB_ENST00000437826.2_Missense_Mutation_p.A261V|CLPB_ENST00000543042.1_Missense_Mutation_p.A105V|CLPB_ENST00000538039.1_Missense_Mutation_p.A276V	NM_001258394.1|NM_030813.4	NP_001245323.1|NP_110440.1	Q9H078	CLPB_HUMAN	ClpB caseinolytic peptidase B homolog (E. coli)	306					cellular response to heat		ATP binding|nucleoside-triphosphatase activity|protein binding			endometrium(3)|kidney(3)|large_intestine(2)|lung(7)|ovary(1)|pancreas(1)|skin(1)|urinary_tract(1)	19						CCCTTCTCGGGCATAATCCAA	0.512000													3	49					0	0	1	0	0
ASPHD1	253982	broad.mit.edu	37	16	29913067	29913067	+	Missense_Mutation	SNP	C	C	T			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr16:29913067C>T	ENST00000308748.5	+	1	1027	c.775C>T	c.(775-777)Cgg>Tgg	p.R259W	ASPHD1_ENST00000483405.1_5'UTR	NM_181718.3	NP_859069.2	Q5U4P2	ASPH1_HUMAN	aspartate beta-hydroxylase domain containing 1	259					peptidyl-amino acid modification	integral to endoplasmic reticulum membrane	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen|peptide-aspartate beta-dioxygenase activity			endometrium(4)|large_intestine(2)|lung(1)|prostate(1)	8						CCAAGCAGGCCGGTGCCAACC	0.672000													4	18					0	0	1	0	0
PPL	5493	broad.mit.edu	37	16	4933905	4933905	+	Missense_Mutation	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr16:4933905G>A	ENST00000345988.2	-	22	4840	c.4751C>T	c.(4750-4752)tCg>tTg	p.S1584L	PPL_ENST00000590782.2_Missense_Mutation_p.S1582L	NM_002705.4	NP_002696.3	O60437	PEPL_HUMAN	periplakin	1584					keratinization	cytoskeleton|desmosome|mitochondrion|nucleus	protein binding|structural constituent of cytoskeleton			breast(6)|central_nervous_system(1)|endometrium(11)|kidney(5)|large_intestine(12)|lung(12)|ovary(4)|prostate(5)|skin(3)|stomach(1)|urinary_tract(2)	62						GTTGATTTCCGATTGGAGCCT	0.542000													11	110					0	0	1	0	0
FOSB	2354	broad.mit.edu	37	19	45974106	45974106	+	Missense_Mutation	SNP	G	G	A	rs143780767		TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr19:45974106G>A	ENST00000353609.3	+	2	938	c.346G>A	c.(346-348)Gga>Aga	p.G116R	FOSB_ENST00000586615.1_Missense_Mutation_p.G67R|FOSB_ENST00000585836.1_Missense_Mutation_p.G77R|FOSB_ENST00000443841.2_Intron|ERCC1_ENST00000423698.2_Intron|FOSB_ENST00000592436.1_Missense_Mutation_p.G116R|FOSB_ENST00000592811.1_Missense_Mutation_p.G67R|FOSB_ENST00000590335.1_Missense_Mutation_p.G116R|FOSB_ENST00000417353.2_Missense_Mutation_p.G116R|FOSB_ENST00000591858.1_Missense_Mutation_p.G77R	NM_006732.2	NP_006723.2	P53539	FOSB_HUMAN	FBJ murine osteosarcoma viral oncogene homolog B	116					behavior|multicellular organismal development|negative regulation of transcription from RNA polymerase II promoter	nucleus	protein dimerization activity|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|transcription factor binding			NS(1)|endometrium(1)|kidney(1)|large_intestine(2)|lung(5)|ovary(2)|pancreas(1)	13		Ovarian(192;0.051)|all_neural(266;0.112)		OV - Ovarian serous cystadenocarcinoma(262;0.00814)|Epithelial(262;0.18)|GBM - Glioblastoma multiforme(486;0.242)		CAGCAGTGGCGGAGCGAGTGG	0.701000													9	100					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145367739	145367739	+	Silent	SNP	A	A	G	rs146714035	by1000genomes	TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:145367739A>G	ENST00000342960.5	+	83	10370	c.10335A>G	c.(10333-10335)aaA>aaG	p.K3445K	NBPF10_ENST00000369338.1_Intron|NBPF10_ENST00000369339.2_Intron	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	3445								p.K3445K(4)		NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		ggaaggggaaaaaaagaaggg	0.413000													3	74					0	0	1	0	0
ANGPTL7	10218	broad.mit.edu	37	1	11254545	11254545	+	Missense_Mutation	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:11254545G>A	ENST00000376819.3	+	4	939	c.700G>A	c.(700-702)Gag>Aag	p.E234K	ANGPTL7_ENST00000476934.1_Intron|MTOR_ENST00000361445.4_Intron	NM_021146.2	NP_066969.1	O43827	ANGL7_HUMAN	angiopoietin-like 7	234	Fibrinogen C-terminal.				response to oxidative stress|signal transduction	extracellular region	receptor binding			endometrium(2)|kidney(1)|large_intestine(1)|lung(3)|skin(2)|stomach(1)	10	Ovarian(185;0.249)	Renal(390;0.000469)|Lung NSC(185;0.000818)|all_lung(284;0.00105)|Colorectal(325;0.0062)|Breast(348;0.0139)|Hepatocellular(190;0.0305)|Myeloproliferative disorder(586;0.0393)|Ovarian(437;0.0731)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0228)|Colorectal(212;1.39e-06)|COAD - Colon adenocarcinoma(227;0.000244)|BRCA - Breast invasive adenocarcinoma(304;0.000294)|Kidney(185;0.000728)|KIRC - Kidney renal clear cell carcinoma(229;0.00258)|STAD - Stomach adenocarcinoma(313;0.0072)|READ - Rectum adenocarcinoma(331;0.0487)		GCGCTACGCTGAGTATAGCCA	0.522000													7	143					0	0	1	0	0
KIAA2026	158358	broad.mit.edu	37	9	5968436	5968436	+	Missense_Mutation	SNP	T	T	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr9:5968436T>A	ENST00000399933.3	-	3	1794	c.1795A>T	c.(1795-1797)Act>Tct	p.T599S	KIAA2026_ENST00000381461.2_Missense_Mutation_p.T599S	NM_001017969.2	NP_001017969.2	Q5HYC2	K2026_HUMAN	KIAA2026	599										breast(6)|central_nervous_system(1)|cervix(1)|endometrium(6)|kidney(1)|large_intestine(11)|lung(15)|ovary(2)|prostate(2)|skin(1)	46		Acute lymphoblastic leukemia(23;0.158)		GBM - Glioblastoma multiforme(50;0.00155)|Lung(218;0.124)		CCAAAGCCAGTAACTTCCCCT	0.363000													7	130					0	0	1	0	0
CROCC	9696	broad.mit.edu	37	1	17272075	17272075	+	Missense_Mutation	SNP	G	G	A	rs2781608	by1000genomes	TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:17272075G>A	ENST00000375541.5	+	15	2179	c.2110G>A	c.(2110-2112)Gcc>Acc	p.A704T	CROCC_ENST00000467938.1_3'UTR	NM_014675.3	NP_055490.3	Q5TZA2	CROCC_HUMAN	ciliary rootlet coiled-coil, rootletin	704					cell cycle|cell projection organization|centrosome organization|protein localization	actin cytoskeleton|centriole|ciliary rootlet|plasma membrane	kinesin binding|structural molecule activity	p.A704T(11)		breast(3)|central_nervous_system(2)|cervix(3)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(12)|large_intestine(1)|lung(20)|ovary(3)|prostate(9)|skin(3)|urinary_tract(1)	62		Colorectal(325;3.46e-05)|Breast(348;0.000162)|Lung NSC(340;0.000174)|all_lung(284;0.000234)|Renal(390;0.000518)|Ovarian(437;0.00669)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00459)|BRCA - Breast invasive adenocarcinoma(304;7.63e-06)|COAD - Colon adenocarcinoma(227;1.07e-05)|Kidney(64;0.000163)|KIRC - Kidney renal clear cell carcinoma(64;0.00258)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.181)		GGCCGAGAAGGCCGAGGTGGC	0.657000													3	27					0	0	1	0	0
ATF7IP2	80063	broad.mit.edu	37	16	10532037	10532037	+	Missense_Mutation	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr16:10532037G>A	ENST00000396560.2	+	5	1267	c.1040G>A	c.(1039-1041)cGc>cAc	p.R347H	ATF7IP2_ENST00000324570.5_Missense_Mutation_p.R347H|ATF7IP2_ENST00000396559.1_Missense_Mutation_p.R347H|ATF7IP2_ENST00000543967.1_Intron|ATF7IP2_ENST00000356427.2_Missense_Mutation_p.R347H	NM_024997.3	NP_079273.2	Q5U623	MCAF2_HUMAN	activating transcription factor 7 interacting protein 2	347					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus				large_intestine(3)	3						TTGAACCAACGCATTGGGAAG	0.333000													10	106					0	0	1	0	0
SYNPO2L	79933	broad.mit.edu	37	10	75406859	75406859	+	Missense_Mutation	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr10:75406859G>A	ENST00000394810.2	-	4	2700	c.2551C>T	c.(2551-2553)Cgg>Tgg	p.R851W	SYNPO2L_ENST00000372872.4_Intron|SYNPO2L_ENST00000372873.4_Missense_Mutation_p.R627W	NM_001114133.1	NP_001107605.1	Q9H987	SYP2L_HUMAN	synaptopodin 2-like	851	Pro-rich.					cytoplasm|cytoskeleton	actin binding	p.R627W(2)|p.R851W(1)		breast(2)|endometrium(3)|kidney(3)|large_intestine(5)|lung(6)|ovary(1)|prostate(4)|upper_aerodigestive_tract(1)|urinary_tract(1)	26	Prostate(51;0.0112)					GGCTGATGCCGCATAAAATCT	0.577000													5	113					0	0	1	0	0
DDX43	55510	broad.mit.edu	37	6	74115421	74115421	+	Nonstop_Mutation	SNP	A	A	T			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr6:74115421A>T	ENST00000539829.1	+	5	641	c.588A>T	c.(586-588)taA>taT	p.*196Y	DDX43_ENST00000370336.4_Missense_Mutation_p.T224S			Q9NXZ2	DDX43_HUMAN	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	0						intracellular	ATP binding|ATP-dependent RNA helicase activity|RNA binding			NS(1)|breast(2)|central_nervous_system(1)|large_intestine(4)|lung(8)|ovary(2)|prostate(1)|skin(3)|upper_aerodigestive_tract(2)	24						TTTTAATATAACGTGGGATGA	0.398000													5	56					0	0	1	0	0
VWA3B	200403	broad.mit.edu	37	2	98736173	98736173	+	Silent	SNP	A	A	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr2:98736173A>G	ENST00000477737.1	+	4	693	c.489A>G	c.(487-489)ctA>ctG	p.L163L	VWA3B_ENST00000451075.2_Intron|VWA3B_ENST00000435344.1_Silent_p.L163L	NM_144992.4	NP_659429.4	Q502W6	VWA3B_HUMAN	von Willebrand factor A domain containing 3B	163										NS(3)|breast(3)|endometrium(5)|haematopoietic_and_lymphoid_tissue(2)|kidney(3)|large_intestine(10)|lung(33)|ovary(3)|prostate(1)|skin(3)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	70						GAGAGGCTCTAACAATGGTTC	0.483000													12	176					0	0	1	0	0
RP11-156P1.3	0	broad.mit.edu	37	17	45126660	45126660	+	RNA	SNP	C	C	T			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr17:45126660C>T	ENST00000575173.1	-	0	418																											GACTGTTGAGCCGGAGGAGCC	0.488000													15	165					0	0	1	0	0
ACOT12	134526	broad.mit.edu	37	5	80638492	80638492	+	Splice_Site	SNP	T	T	C			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr5:80638492T>C	ENST00000307624.3	-	11	1155	c.1128_splice	c.e11+1	p.K376_splice	ACOT12_ENST00000508234.1_Intron	NM_130767.2	NP_570123.1	Q8WYK0	ACO12_HUMAN	acyl-CoA thioesterase 12	376	START.				acyl-CoA metabolic process|fatty acid metabolic process	cytosol	acetyl-CoA hydrolase activity|carboxylesterase activity			cervix(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(10)|lung(7)|ovary(2)	23		Lung NSC(167;0.0176)|all_lung(232;0.0205)|Ovarian(174;0.135)		OV - Ovarian serous cystadenocarcinoma(54;1.37e-45)|Epithelial(54;1.25e-39)|all cancers(79;5.01e-34)		GTGTCCTACCTTTTCCACAGT	0.468000													10	115					0	0	1	0	0
PCNT	5116	broad.mit.edu	37	21	47754580	47754580	+	Silent	SNP	G	G	A	rs140511264		TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr21:47754580G>A	ENST00000359568.5	+	3	644	c.537G>A	c.(535-537)ccG>ccA	p.P179P	PCNT_ENST00000480896.1_3'UTR	NM_006031.5	NP_006022.3	O95613	PCNT_HUMAN	pericentrin	179					cilium assembly|G2/M transition of mitotic cell cycle	cytosol|microtubule	calmodulin binding	p.P179P(1)		NS(1)|breast(5)|central_nervous_system(2)|cervix(1)|endometrium(11)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(15)|liver(2)|lung(41)|ovary(5)|pancreas(3)|prostate(3)|skin(5)|upper_aerodigestive_tract(2)|urinary_tract(2)	104	Breast(49;0.112)					ACCACCAACCGGAACAGCGTG	0.537000													4	65					0	0	1	0	0
GATC	283459	broad.mit.edu	37	12	120897761	120897761	+	Nonstop_Mutation	SNP	G	G	C			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr12:120897761G>C	ENST00000551765.1	+	4	453	c.410G>C	c.(409-411)tGa>tCa	p.*137S	AL021546.6_ENST00000551806.1_Nonstop_Mutation_p.*168L	NM_176818.2	NP_789788.1	O43716	GATCL_HUMAN	glutamyl-tRNA(Gln) amidotransferase, subunit C	0					regulation of translational fidelity					breast(1)|lung(2)|upper_aerodigestive_tract(1)|urinary_tract(2)	6	all_neural(191;0.0804)|Medulloblastoma(191;0.0922)					CCACACAGCTGAGTAGCTCAT	0.368000													5	58					0	0	1	0	0
C11orf74	119710	broad.mit.edu	37	11	36680674	36680674	+	Missense_Mutation	SNP	G	G	C			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:36680674G>C	ENST00000334307.5	+	6	719	c.604G>C	c.(604-606)Gag>Cag	p.E202Q	C11orf74_ENST00000534635.1_Missense_Mutation_p.E128Q|C11orf74_ENST00000347206.4_Missense_Mutation_p.E128Q|C11orf74_ENST00000446510.2_Intron	NM_138787.2	NP_620142.2	Q86VG3	CK074_HUMAN	chromosome 11 open reading frame 74	202										breast(1)|kidney(1)|large_intestine(1)|lung(5)	8	all_lung(20;0.226)	all_hematologic(20;0.0118)				GAACATCAAAGAGCTATGCAA	0.393000													4	75					0	0	1	0	0
LAT	0	broad.mit.edu	37	16	28997053	28997053	+	Silent	SNP	C	C	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr16:28997053C>G	ENST00000395456.2	+	2	442	c.120C>G	c.(118-120)tcC>tcG	p.S40S	LAT_ENST00000395461.3_Silent_p.S76S|LAT_ENST00000360872.5_Silent_p.S40S|LAT_ENST00000354453.4_Silent_p.S40S|LAT_ENST00000563964.1_3'UTR|LAT_ENST00000454369.2_Silent_p.S40S|LAT_ENST00000564277.1_Silent_p.S40S|LAT_ENST00000566177.1_Silent_p.S40S|RP11-264B17.3_ENST00000569969.1_RNA	NM_001014987.1|NM_001014988.1|NM_014387.3	NP_001014987.1|NP_001014988.1|NP_055202.1	O43561	LAT_HUMAN	linker for activation of T cells	40					calcium-mediated signaling|integrin-mediated signaling pathway|mast cell degranulation|platelet activation|Ras protein signal transduction|regulation of T cell activation|T cell receptor signaling pathway	immunological synapse|integral to membrane|intracellular|membrane raft	SH3/SH2 adaptor activity			large_intestine(2)|lung(3)|urinary_tract(1)	6		Hepatocellular(780;0.244)				ACAGCACATCCTCAGATAGGT	0.657000													12	212					0	0	1	0	0
PDGFRB	5159	broad.mit.edu	37	5	149502718	149502718	+	Silent	SNP	C	C	T			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr5:149502718C>T	ENST00000261799.4	-	15	2539	c.2070G>A	c.(2068-2070)gtG>gtA	p.V690V		NM_002609.3	NP_002600.1	P09619	PGFRB_HUMAN	platelet-derived growth factor receptor, beta polypeptide	690	Protein kinase.				aorta morphogenesis|cardiac myofibril assembly|hemopoiesis|metanephric glomerular capillary formation|metanephric glomerular mesangial cell proliferation involved in metanephros development|peptidyl-tyrosine phosphorylation|positive regulation of calcium ion import|positive regulation of chemotaxis|positive regulation of DNA biosynthetic process|positive regulation of ERK1 and ERK2 cascade|positive regulation of MAP kinase activity|positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway|positive regulation of mitosis|positive regulation of phosphatidylinositol 3-kinase cascade|positive regulation of reactive oxygen species metabolic process|positive regulation of smooth muscle cell migration|positive regulation of smooth muscle cell proliferation|protein autophosphorylation|regulation of actin cytoskeleton organization|retina vasculature development in camera-type eye|smooth muscle cell chemotaxis	apical plasma membrane|cytoplasm|integral to plasma membrane|nucleus	ATP binding|platelet activating factor receptor activity|platelet-derived growth factor beta-receptor activity|platelet-derived growth factor binding|platelet-derived growth factor receptor binding|vascular endothelial growth factor receptor activity			breast(3)|central_nervous_system(5)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(9)|kidney(3)|large_intestine(12)|lung(20)|ovary(3)|prostate(3)|skin(3)|stomach(6)|urinary_tract(1)	75		all_hematologic(541;0.224)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)		Becaplermin(DB00102)|Dasatinib(DB01254)|Imatinib(DB00619)|Sorafenib(DB00398)|Sunitinib(DB01268)	GCAGGTAGTCCACCAGGTCTC	0.622000			T	"""ETV6, TRIP11, HIP1, RAB5EP, H4, NIN, HCMOGT-1, PDE4DIP"""	"""MPD, AML, CMML, CML"""								5	71					0	0	1	0	0
ETS1	2113	broad.mit.edu	37	11	128426243	128426243	+	Missense_Mutation	SNP	A	A	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:128426243A>G	ENST00000392668.3	-	3	225	c.157T>C	c.(157-159)Ttt>Ctt	p.F53L	ETS1_ENST00000525404.1_5'UTR	NM_001143820.1	NP_001137292.1	P14921	ETS1_HUMAN	v-ets avian erythroblastosis virus E26 oncogene homolog 1	151	PNT.				cell motility|immune response|induction of apoptosis|negative regulation of cell cycle|negative regulation of cell proliferation|PML body organization|positive regulation of cellular component movement|positive regulation of erythrocyte differentiation|positive regulation of transcription from RNA polymerase II promoter|positive regulation of transcription, DNA-dependent|response to antibiotic|transcription from RNA polymerase II promoter	nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|transcription factor binding			breast(1)|central_nervous_system(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(5)|kidney(1)|large_intestine(3)|lung(15)|ovary(1)|pleura(1)|prostate(1)|upper_aerodigestive_tract(3)	35	all_hematologic(175;0.0537)	Lung NSC(97;0.000542)|all_lung(97;0.000665)|Breast(109;0.00765)|all_neural(223;0.0351)|Medulloblastoma(222;0.0425)		BRCA - Breast invasive adenocarcinoma(274;1.47e-05)|OV - Ovarian serous cystadenocarcinoma(99;0.0174)|LUSC - Lung squamous cell carcinoma(976;0.0815)|Lung(307;0.0833)		TCATCCCAAAAGGGGTAGCAA	0.448000													3	64					0	0	1	0	0
OR2B11	127623	broad.mit.edu	37	1	247614554	247614554	+	Missense_Mutation	SNP	G	G	A	rs141064927	by1000genomes	TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:247614554G>A	ENST00000318749.6	-	1	754	c.731C>T	c.(730-732)aCg>aTg	p.T244M		NM_001004492.1	NP_001004492.1	Q5JQS5	OR2BB_HUMAN	olfactory receptor, family 2, subfamily B, member 11	244					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			endometrium(3)|kidney(13)|large_intestine(7)|lung(31)|ovary(2)|prostate(3)|upper_aerodigestive_tract(1)	60	all_cancers(71;4.51e-05)|all_epithelial(71;1.3e-05)|Breast(184;0.0149)|Ovarian(71;0.0377)|all_lung(81;0.0662)|Lung NSC(105;0.0724)	all_cancers(173;0.241)	OV - Ovarian serous cystadenocarcinoma(106;0.0188)			GGAGGAACACGTCCCAAAGGC	0.552000													8	85					0	0	1	0	0
PGS1	9489	broad.mit.edu	37	17	76394348	76394348	+	Missense_Mutation	SNP	A	A	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr17:76394348A>G	ENST00000262764.6	+	4	453	c.427A>G	c.(427-429)Agt>Ggt	p.S143G	PGS1_ENST00000329897.7_Missense_Mutation_p.S8G	NM_024419.3	NP_077733.3	Q32NB8	PGPS1_HUMAN	phosphatidylglycerophosphate synthase 1	143					phospholipid biosynthetic process	endoplasmic reticulum|mitochondrion	ATP binding|CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity			cervix(2)|endometrium(1)|large_intestine(1)|lung(3)|prostate(1)|skin(1)|urinary_tract(1)	10			BRCA - Breast invasive adenocarcinoma(99;0.00144)|OV - Ovarian serous cystadenocarcinoma(97;0.031)			CTGCCTGGAAAGTACTCTAGA	0.448000													14	205					0	0	1	0	0
SLC35C1	55343	broad.mit.edu	37	11	45827881	45827881	+	Missense_Mutation	SNP	A	A	G			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr11:45827881A>G	ENST00000314134.3	+	1	1925	c.529A>G	c.(529-531)Atc>Gtc	p.I177V	SLC35C1_ENST00000456334.1_Missense_Mutation_p.I164V|SLC35C1_ENST00000442528.2_Missense_Mutation_p.I164V	NM_018389.4	NP_060859.4	Q96A29	FUCT1_HUMAN	solute carrier family 35 (GDP-fucose transporter), member C1	177						Golgi membrane|integral to membrane	GDP-fucose transmembrane transporter activity			endometrium(3)|kidney(1)|lung(4)|ovary(1)|upper_aerodigestive_tract(1)	10				GBM - Glioblastoma multiforme(35;0.227)		CTGCGGTATCATCATCGGTGA	0.567000													4	26					0	0	1	0	0
SI	6476	broad.mit.edu	37	3	164724640	164724640	+	Missense_Mutation	SNP	T	T	C			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr3:164724640T>C	ENST00000264382.3	-	37	4432	c.4370A>G	c.(4369-4371)aAt>aGt	p.N1457S		NM_001041.3	NP_001032.2	P14410	SUIS_HUMAN	sucrase-isomaltase (alpha-glucosidase)	1457	Sucrase.				carbohydrate metabolic process|polysaccharide digestion	apical plasma membrane|brush border|Golgi apparatus|integral to membrane	carbohydrate binding|oligo-1,6-glucosidase activity|sucrose alpha-glucosidase activity			NS(4)|breast(1)|central_nervous_system(2)|cervix(1)|endometrium(13)|haematopoietic_and_lymphoid_tissue(6)|kidney(10)|large_intestine(18)|lung(124)|ovary(9)|pancreas(1)|prostate(6)|skin(6)|upper_aerodigestive_tract(16)|urinary_tract(1)	218		Prostate(884;0.00314)|Melanoma(1037;0.0153)|all_neural(597;0.0199)			Acarbose(DB00284)	TCCATAGAGATTGTGAACATC	0.353000										HNSCC(35;0.089)			3	49					0	0	1	0	0
ADAMTS17	170691	broad.mit.edu	37	15	100537662	100537662	+	Silent	SNP	G	G	A			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr15:100537662G>A	ENST00000268070.4	-	19	2829	c.2724C>T	c.(2722-2724)ccC>ccT	p.P908P		NM_139057.2	NP_620688.2	Q8TE56	ATS17_HUMAN	ADAM metallopeptidase with thrombospondin type 1 motif, 17	908	TSP type-1 3.				proteolysis	intracellular|proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding			NS(1)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(3)|kidney(1)|large_intestine(11)|lung(24)|ovary(3)|prostate(2)	50	Lung NSC(78;0.00299)|all_lung(78;0.00457)|Melanoma(26;0.00571)		OV - Ovarian serous cystadenocarcinoma(32;0.0013)|LUSC - Lung squamous cell carcinoma(107;0.132)|Lung(145;0.161)	COAD - Colon adenocarcinoma(1;0.111)|all cancers(203;0.219)		ccgccggccgggggcccgggc	0.672000													3	27					0	0	1	0	0
MGAM	8972	broad.mit.edu	37	7	141767225	141767225	+	Splice_Site	SNP	C	C	T	rs7778384	by1000genomes	TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr7:141767225C>T	ENST00000475668.2	+	42	5058	c.5004_splice	c.e42+1	p.R1668_splice	MGAM_ENST00000549489.2_Intron			O43451	MGA_HUMAN	maltase-glucoamylase (alpha-glucosidase)	1668	Glucoamylase.				polysaccharide digestion|starch catabolic process	apical plasma membrane|integral to membrane	carbohydrate binding|glucan 1,4-alpha-glucosidase activity|maltose alpha-glucosidase activity			cervix(1)|endometrium(1)|large_intestine(4)|lung(3)|ovary(2)|skin(2)	13	Melanoma(164;0.0272)				Acarbose(DB00284)|Miglitol(DB00491)|Voglibose(DB04878)	TCCTGGAGCGCGTGAGTATGG	0.592000													3	41					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145367767	145367767	+	Missense_Mutation	SNP	G	G	A	rs77484671		TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:145367767G>A	ENST00000342960.5	+	83	10398	c.10363G>A	c.(10363-10365)Gaa>Aaa	p.E3455K	NBPF10_ENST00000369338.1_Intron|NBPF10_ENST00000369339.2_Intron	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	3455								p.E3455K(5)		NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		atcaaagaaggaaagaagaag	0.423000													4	50					0	0	1	0	0
PHF13	148479	broad.mit.edu	37	1	6680069	6680071	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:6680069_6680071delGAA	ENST00000377648.4	+	3	730_732	c.348_350delGAA	c.(346-351)ctg>ct	p.LK116del	PHF13_ENST00000495385.1_Intron	NM_153812.2	NP_722519.2	Q86YI8	PHF13_HUMAN	PHD finger protein 13	116					cell division|chromatin modification|mitotic chromosome condensation	nucleoplasm	chromatin binding|methylated histone residue binding|zinc ion binding			endometrium(3)|large_intestine(1)|lung(3)	7	Ovarian(185;0.0212)|all_lung(157;0.154)	all_cancers(23;1.46e-33)|all_epithelial(116;9.26e-22)|all_lung(118;7.57e-07)|Lung NSC(185;4.26e-06)|Breast(487;0.000353)|Renal(390;0.0007)|Colorectal(325;0.00104)|Hepatocellular(190;0.00308)|Myeloproliferative disorder(586;0.0255)|Ovarian(437;0.0443)		Colorectal(212;1.19e-07)|COAD - Colon adenocarcinoma(227;1.3e-05)|Kidney(185;4.88e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000501)|KIRC - Kidney renal clear cell carcinoma(229;0.000871)|STAD - Stomach adenocarcinoma(132;0.0165)|READ - Rectum adenocarcinoma(331;0.0642)		cggacaagctgaagaagaagaag	0.576													7	95	---	---	---	---					
HAX1	10456	broad.mit.edu	37	1	154245864	154245866	+	In_Frame_Del	DEL	GAA	GAA	-	rs11556342		TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr1:154245864_154245866delGAA	ENST00000328703.7	+	2	319_321	c.106_108delGAA	c.(106-108)del	p.E40del	HAX1_ENST00000532105.1_Intron|HAX1_ENST00000483970.2_In_Frame_Del_p.E40del|HAX1_ENST00000457918.2_Intron	NM_006118.3	NP_006109.2	O00165	HAX1_HUMAN	HCLS1 associated protein X-1	40	Asp/Glu-rich (highly acidic).|Required for localization in mitochondria (By similarity).					actin cytoskeleton|cytoplasmic membrane-bounded vesicle|lamellipodium|mitochondrion|nuclear membrane|sarcoplasmic reticulum|soluble fraction	interleukin-1 binding|protein N-terminus binding			cervix(1)|endometrium(2)|large_intestine(2)|lung(8)|prostate(1)|upper_aerodigestive_tract(1)	15	all_lung(78;2.62e-30)|Lung NSC(65;3.94e-28)|Hepatocellular(266;0.0877)		LUSC - Lung squamous cell carcinoma(543;0.185)			TGATGATGAGGAAGAAGAAGAAG	0.522									Kostmann syndrome				8	86	---	---	---	---					
RP11-556I14.1	0	broad.mit.edu	37	4	105918245	105918246	+	RNA	DEL	CC	CC	-	rs145057012	by1000genomes	TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr4:105918245_105918246delCC	ENST00000506386.1	+	0	71																											ctttttttttcctttttttttt	0.312													4	4	---	---	---	---					
BOD1	91272	broad.mit.edu	37	5	173043417	173043419	+	In_Frame_Del	DEL	CCG	CCG	-			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chr5:173043417_173043419delCCG	ENST00000311086.4	-	1	244_246	c.21_23delCGG	c.(19-24)ggg>gg	p.GG7del	BOD1_ENST00000480951.1_In_Frame_Del_p.GG7del|BOD1_ENST00000471339.1_5'UTR|BOD1_ENST00000285908.5_In_Frame_Del_p.GG7del	NM_138369.2	NP_612378.1	Q96IK1	BOD1_HUMAN	biorientation of chromosomes in cell division 1	7	Gly-rich.				cell division|mitosis	condensed chromosome kinetochore|microtubule organizing center				endometrium(1)|large_intestine(2)|lung(2)|ovary(2)	7						GCCAGTTCCCCCGCCGCCGCCGC	0.714													2	4	---	---	---	---					
ZMYM3	9203	broad.mit.edu	37	X	70465642	70465642	+	Frame_Shift_Del	DEL	A	A	-			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chrX:70465642delA	ENST00000373998.1	-	17	3397	c.2700delT	c.(2698-2700)atfs	p.I900fs	ZMYM3_ENST00000314425.5_Frame_Shift_Del_p.I912fs|ZMYM3_ENST00000373988.1_Frame_Shift_Del_p.I914fs|ZMYM3_ENST00000489332.1_5'UTR|ZMYM3_ENST00000373984.3_Frame_Shift_Del_p.I914fs|ZMYM3_ENST00000353904.2_Frame_Shift_Del_p.I912fs	NM_001171162.1	NP_001164633.1	Q14202	ZMYM3_HUMAN	zinc finger, MYM-type 3	912					multicellular organismal development	nucleus	DNA binding|zinc ion binding			breast(1)|central_nervous_system(7)|endometrium(11)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(12)|lung(17)|ovary(1)|prostate(9)|upper_aerodigestive_tract(1)|urinary_tract(1)	64	Renal(35;0.156)					TGGTCTCTACAATCTTGTCTG	0.532													8	26	---	---	---	---					
AMOT	154796	broad.mit.edu	37	X	112022477	112022479	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-KK-A7B2-01A-12D-A32B-08	TCGA-KK-A7B2-11A-11D-A329-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	323679ff-5644-4826-9486-a60ba6b0431f	cf3e0850-c21c-4739-8085-7e278dded3cc	g.chrX:112022477_112022479delCAG	ENST00000371959.3	-	10	2902_2904	c.2903_2905delCTG	c.(2902-2907)gtt>g	p.AV968del	AMOT_ENST00000524145.1_In_Frame_Del_p.AV968del|AMOT_ENST00000304758.1_In_Frame_Del_p.AV559del|AMOT_ENST00000371962.1_In_Frame_Del_p.AV736del	NM_001113490.1	NP_001106962.1	Q4VCS5	AMOT_HUMAN	angiomotin	968					actin cytoskeleton organization|cell-cell junction assembly|negative regulation of angiogenesis|negative regulation of vascular permeability|positive regulation of blood vessel endothelial cell migration|positive regulation of cell size|positive regulation of stress fiber assembly|regulation of cell migration	actin filament|cell surface|cytoplasm|endocytic vesicle|external side of plasma membrane|integral to membrane|lamellipodium|ruffle|stress fiber|tight junction	angiostatin binding|protein binding|receptor activity			breast(1)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(5)|lung(25)|ovary(2)|skin(2)|upper_aerodigestive_tract(1)	43						GCAACCTGAAcagcagcagcagc	0.616													2	4	---	---	---	---