Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ICA1 3382 hgsc.bcm.edu 36 7 8234806 8234806 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ABCB5 340273 hgsc.bcm.edu 36 7 20734579 20734579 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DNAH11 8701 hgsc.bcm.edu 36 7 21748300 21748300 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TARP 445347 hgsc.bcm.edu 36 7 38266225 38266225 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PLXNA4 91584 hgsc.bcm.edu 36 7 131515131 131515131 + Silent SNP T T C rs3734989 byCluster;byFrequency;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SSPO 23145 hgsc.bcm.edu 36 7 149128319 149128319 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CRNKL1 51340 hgsc.bcm.edu 36 20 19980998 19980998 + Missense_Mutation SNP T T C rs2255255 by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C20orf112 140688 hgsc.bcm.edu 36 20 30505179 30505179 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ZNF341 84905 hgsc.bcm.edu 36 20 31842924 31842924 + Silent SNP T T C rs2626551 byCluster;byFrequency;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LBP 3929 hgsc.bcm.edu 36 20 36416242 36416242 + Silent SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GNAS 2778 hgsc.bcm.edu 36 20 56917815 56917815 + Missense_Mutation SNP C C A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CHRNA4 1137 hgsc.bcm.edu 36 20 61452618 61452618 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MLC1 23209 hgsc.bcm.edu 36 22 48844618 48844618 + Missense_Mutation SNP T T C rs11568188 byFrequency TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HNRNPC 3183 hgsc.bcm.edu 36 14 20750978 20750978 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ADCY4 196883 hgsc.bcm.edu 36 14 23863171 23863171 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ACTN1 87 hgsc.bcm.edu 36 14 68457521 68457521 + Missense_Mutation SNP A A C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PAPLN 89932 hgsc.bcm.edu 36 14 72800181 72800181 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C14orf145 145508 hgsc.bcm.edu 36 14 80095377 80095377 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FLRT2 23768 hgsc.bcm.edu 36 14 85158747 85158747 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 AZU1 566 hgsc.bcm.edu 36 19 781820 781820 + Missense_Mutation SNP G G A rs28626600 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 S1PR4 8698 hgsc.bcm.edu 36 19 3130472 3130472 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MUC16 94025 hgsc.bcm.edu 36 19 8908485 8908485 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SYDE1 85360 hgsc.bcm.edu 36 19 15081577 15081577 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CPAMD8 27151 hgsc.bcm.edu 36 19 16875404 16875404 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 APLP1 333 hgsc.bcm.edu 36 19 41054413 41054413 + Silent SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DMWD 1762 hgsc.bcm.edu 36 19 50981343 50981343 + Silent SNP C C T rs8109951 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LIG1 26018 hgsc.bcm.edu 36 19 53348952 53348952 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SIGLEC10 89790 hgsc.bcm.edu 36 19 56611114 56611114 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ZNF415 55786 hgsc.bcm.edu 36 19 58304495 58304495 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KIR2DS4 3809 hgsc.bcm.edu 36 19 60036058 60036058 + Silent SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GP6 51206 hgsc.bcm.edu 36 19 60218157 60218157 + Missense_Mutation SNP T T G rs1671152 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TCEA1 6917 hgsc.bcm.edu 36 8 55085592 55085592 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 VPS13B 157680 hgsc.bcm.edu 36 8 100523950 100523950 + Missense_Mutation SNP C C A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 RAD21 5885 hgsc.bcm.edu 36 8 117933418 117933418 + Nonsense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NOV 6134 hgsc.bcm.edu 36 8 120498025 120498025 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ZC3H3 23144 hgsc.bcm.edu 36 8 144621962 144621962 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TONSL 0 hgsc.bcm.edu 36 8 145632128 145632128 + Silent SNP G G A rs2721140 by2Hit2Allele;byCluster;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 RECQL4 9401 hgsc.bcm.edu 36 8 145708624 145708624 + Silent SNP C C T rs4251691 byCluster;byFrequency TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRAMEF10 343071 hgsc.bcm.edu 36 1 12878061 12878061 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRAMEF10 343071 hgsc.bcm.edu 36 1 12878075 12878075 + Missense_Mutation SNP A A T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 WNT4 54361 hgsc.bcm.edu 36 1 22328924 22328924 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ZC3H12A 80149 hgsc.bcm.edu 36 1 37721645 37721645 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C1orf173 127254 hgsc.bcm.edu 36 1 74811727 74811727 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRRC2C 0 hgsc.bcm.edu 36 1 169793212 169793212 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 IER5 51278 hgsc.bcm.edu 36 1 179324968 179324968 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FAM129A 116496 hgsc.bcm.edu 36 1 183134949 183134949 + Missense_Mutation SNP A A T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 OBSCN 84033 hgsc.bcm.edu 36 1 226466389 226466389 + Silent SNP T T C rs55971985 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 OBSCN 84033 hgsc.bcm.edu 36 1 226546423 226546423 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ACTA1 58 hgsc.bcm.edu 36 1 227634463 227634463 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GALNT2 2590 hgsc.bcm.edu 36 1 228439086 228439086 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 B4GALNT4 338707 hgsc.bcm.edu 36 11 362700 362700 + Silent SNP G G C rs35475866 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MUC2 4583 hgsc.bcm.edu 36 11 1082954 1082954 + Silent SNP G G A rs56352686 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LSP1 390387 hgsc.bcm.edu 36 11 1830980 1830980 + Silent SNP C C T rs2089910 by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TCIRG1 10312 hgsc.bcm.edu 36 11 67573168 67573168 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KRTAP5-8 440021 hgsc.bcm.edu 36 11 70927100 70927100 + Silent SNP C C G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ATM 472 hgsc.bcm.edu 36 11 107705148 107705148 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PHIP 55023 hgsc.bcm.edu 36 6 79707296 79707296 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SYNE1 23345 hgsc.bcm.edu 36 6 152518905 152518905 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 THBS2 7058 hgsc.bcm.edu 36 6 169362280 169362280 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SGSM2 9905 hgsc.bcm.edu 36 17 2213562 2213562 + Silent SNP T T C rs2003968 by2Hit2Allele;byCluster TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KCNJ12 3768 hgsc.bcm.edu 36 17 21260461 21260461 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NF1 4763 hgsc.bcm.edu 36 17 26570262 26570262 + Silent SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NF1 4763 hgsc.bcm.edu 36 17 26708156 26708156 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PPM1E 22843 hgsc.bcm.edu 36 17 54188490 54188490 + Missense_Mutation SNP T T C rs58091258 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DNAI2 64446 hgsc.bcm.edu 36 17 69807549 69807549 + Silent SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CASKIN2 57513 hgsc.bcm.edu 36 17 71010058 71010058 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRCD 768206 hgsc.bcm.edu 36 17 72047835 72047835 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 AZI1 22994 hgsc.bcm.edu 36 17 76790688 76790688 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TIAM1 7074 hgsc.bcm.edu 36 21 31546201 31546201 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C16orf11 146325 hgsc.bcm.edu 36 16 555049 555049 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 WFIKKN1 117166 hgsc.bcm.edu 36 16 621285 621285 + Silent SNP C C T rs8062289 unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FBXL16 146330 hgsc.bcm.edu 36 16 687030 687030 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SLC6A2 6530 hgsc.bcm.edu 36 16 54276635 54276635 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SLC38A7 55238 hgsc.bcm.edu 36 16 57263633 57263633 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HYDIN 54768 hgsc.bcm.edu 36 16 69421209 69421209 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HP 10395 hgsc.bcm.edu 36 16 70650538 70650538 + Missense_Mutation SNP A A T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CMIP 80790 hgsc.bcm.edu 36 16 80036433 80036433 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LAMA1 284217 hgsc.bcm.edu 36 18 6948514 6948514 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LAMA1 284217 hgsc.bcm.edu 36 18 6975393 6975393 + Missense_Mutation SNP C C G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SMAD4 4089 hgsc.bcm.edu 36 18 46845923 46845923 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 RAF1 5894 hgsc.bcm.edu 36 3 12616307 12616307 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 RBM6 10180 hgsc.bcm.edu 36 3 50073952 50073952 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SEMA3G 56920 hgsc.bcm.edu 36 3 52450705 52450705 + Nonsense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DZIP1L 199221 hgsc.bcm.edu 36 3 139269737 139269737 + Missense_Mutation SNP C C T rs374045 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ATR 390502 hgsc.bcm.edu 36 3 143659192 143659192 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GPR149 344758 hgsc.bcm.edu 36 3 155538753 155538753 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SI 6490 hgsc.bcm.edu 36 3 166199045 166199045 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GNB4 59345 hgsc.bcm.edu 36 3 180615477 180615477 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MUC4 4585 hgsc.bcm.edu 36 3 196993440 196993440 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KRAS 3845 hgsc.bcm.edu 36 12 25289552 25289552 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRICKLE1 144165 hgsc.bcm.edu 36 12 41140168 41140168 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 RAB21 23011 hgsc.bcm.edu 36 12 70435302 70435302 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 APAF1 317 hgsc.bcm.edu 36 12 97567459 97567459 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HNF1A 6927 hgsc.bcm.edu 36 12 119911072 119911072 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DISP2 85455 hgsc.bcm.edu 36 15 38449018 38449018 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 IQGAP1 8826 hgsc.bcm.edu 36 15 88818011 88818011 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DCAF8L2 0 hgsc.bcm.edu 36 X 27675451 27675451 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TAB3 257397 hgsc.bcm.edu 36 X 30782672 30782672 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DMD 1756 hgsc.bcm.edu 36 X 32396595 32396595 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GPKOW 27238 hgsc.bcm.edu 36 X 48865750 48865750 + Missense_Mutation SNP A A T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 WNK3 65267 hgsc.bcm.edu 36 X 54345008 54345008 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 THOC2 57187 hgsc.bcm.edu 36 X 122648148 122648148 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TFDP3 51270 hgsc.bcm.edu 36 X 132179512 132179512 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FLNA 2316 hgsc.bcm.edu 36 X 153239183 153239183 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FLNA 2316 hgsc.bcm.edu 36 X 153243542 153243542 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CRIPAK 285464 hgsc.bcm.edu 36 4 1378759 1378759 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CRIPAK 285464 hgsc.bcm.edu 36 4 1378817 1378817 + Missense_Mutation SNP C C G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CRIPAK 285464 hgsc.bcm.edu 36 4 1379156 1379156 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CRIPAK 285464 hgsc.bcm.edu 36 4 1379384 1379384 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FGFR3 2261 hgsc.bcm.edu 36 4 1777628 1777628 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRKG2 5593 hgsc.bcm.edu 36 4 82284457 82284457 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DSPP 1834 hgsc.bcm.edu 36 4 88756459 88756459 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ODZ3 55714 hgsc.bcm.edu 36 4 183933099 183933099 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KCNF1 3754 hgsc.bcm.edu 36 2 10971266 10971266 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 E2F6 1876 hgsc.bcm.edu 36 2 11505264 11505264 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ITSN2 50618 hgsc.bcm.edu 36 2 24292481 24292481 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PLEKHH2 130271 hgsc.bcm.edu 36 2 43780518 43780518 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SLC1A4 6509 hgsc.bcm.edu 36 2 65097085 65097085 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ANKRD53 79998 hgsc.bcm.edu 36 2 71062627 71062627 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CTNNA2 1496 hgsc.bcm.edu 36 2 79954826 79954826 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GLI2 2736 hgsc.bcm.edu 36 2 121446010 121446010 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SMPD4 55627 hgsc.bcm.edu 36 2 130627843 130627843 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NCKAP5 0 hgsc.bcm.edu 36 2 133257896 133257896 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 FMNL2 114793 hgsc.bcm.edu 36 2 153184315 153184315 + Silent SNP C C A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TTN 7273 hgsc.bcm.edu 36 2 179206164 179206164 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 ACCN4 55515 hgsc.bcm.edu 36 2 220110641 220110641 + Missense_Mutation SNP C C G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HJURP 55355 hgsc.bcm.edu 36 2 234414470 234414470 + Silent SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MLLT3 4300 hgsc.bcm.edu 36 9 20404298 20404298 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TAF1L 138474 hgsc.bcm.edu 36 9 32620106 32620106 + Missense_Mutation SNP G G T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CDK20 0 hgsc.bcm.edu 36 9 89775945 89775945 + Missense_Mutation SNP C C G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PTCH1 5727 hgsc.bcm.edu 36 9 97287878 97287878 + Missense_Mutation SNP T T C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SLC25A25 114789 hgsc.bcm.edu 36 9 129909521 129909521 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NUP188 23511 hgsc.bcm.edu 36 9 130795763 130795763 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GFI1B 8328 hgsc.bcm.edu 36 9 134854994 134854994 + Silent SNP C C A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CACNA1B 774 hgsc.bcm.edu 36 9 139971936 139971936 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 BRCA2 675 hgsc.bcm.edu 36 13 31809252 31809252 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 BRCA2 675 hgsc.bcm.edu 36 13 31811536 31811536 + Missense_Mutation SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 DACH1 1602 hgsc.bcm.edu 36 13 71102808 71102808 + Missense_Mutation SNP G G A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CALML5 51806 hgsc.bcm.edu 36 10 5531181 5531181 + Missense_Mutation SNP T T C rs10904516 by2Hit2Allele TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CALML5 51806 hgsc.bcm.edu 36 10 5531183 5531183 + Silent SNP C C T rs10904517 by2Hit2Allele;byCluster TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C10orf140 387640 hgsc.bcm.edu 36 10 21845492 21845492 + Silent SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GPRIN2 9721 hgsc.bcm.edu 36 10 46419005 46419005 + Missense_Mutation SNP G G A rs3127818 by2Hit2Allele TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GPRIN2 9721 hgsc.bcm.edu 36 10 46419025 46419025 + Missense_Mutation SNP G G A rs3127819 by2Hit2Allele TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 HNRNPH3 3189 hgsc.bcm.edu 36 10 69771799 69771799 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C5orf38 153571 hgsc.bcm.edu 36 5 2805437 2805437 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SEMA5A 9037 hgsc.bcm.edu 36 5 9433001 9433001 + Missense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CDC20B 166979 hgsc.bcm.edu 36 5 54460120 54460120 + Missense_Mutation SNP G G C novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 APC 324 hgsc.bcm.edu 36 5 112203104 112203104 + Missense_Mutation SNP C C A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PCDHA3 56145 hgsc.bcm.edu 36 5 140162454 140162454 + Silent SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SLC36A2 153201 hgsc.bcm.edu 36 5 150702648 150702648 + Nonsense_Mutation SNP C C T novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 IMPG2 50939 hgsc.bcm.edu 36 3 102505678 102505678 + Splice_Site SNP A A G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 C2orf71 388939 hgsc.bcm.edu 36 2 29141430 29141431 + In_Frame_Ins INS - - GCT novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 MUC4 4585 hgsc.bcm.edu 36 3 196999762 196999809 + In_Frame_Del DEL GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PRKAR2B 5577 hgsc.bcm.edu 36 7 106568567 106568567 + Frame_Shift_Del DEL T T - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 GPRIN2 9721 hgsc.bcm.edu 36 10 46419597 46419598 + In_Frame_Ins INS - - ATGAGGGAG novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PABPC3 5042 hgsc.bcm.edu 36 13 24568801 24568802 + Frame_Shift_Ins INS - - A novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 PHGR1 0 hgsc.bcm.edu 36 15 38435665 38435697 + In_Frame_Del DEL CCAGGGCCCTGCGGGCCACCCCCTGGCCATGGC CCAGGGCCCTGCGGGCCACCCCCTGGCCATGGC - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 CCAGGGCCCTGCGGGCCACCCCCTGGCCATGGC CCAGGGCCCTGCGGGCCACCCCCTGGCCATGGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 TP53 7157 hgsc.bcm.edu 36 17 7520195 7520196 + Frame_Shift_Ins INS - - G novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 LSR 51599 hgsc.bcm.edu 36 19 40450115 40450116 + In_Frame_Ins INS - - GGA novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 NEFH 4744 hgsc.bcm.edu 36 22 28215567 28215568 + In_Frame_Ins INS - - AAGTCCCCTGAGAAGGCC novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 CDC42EP1 11135 hgsc.bcm.edu 36 22 36294355 36294375 + In_Frame_Del DEL CAGCGCCTGCTGCAAACCCCT CAGCGCCTGCTGCAAACCCCT - novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 CAGCGCCTGCTGCAAACCCCT CAGCGCCTGCTGCAAACCCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98 SHROOM4 57477 hgsc.bcm.edu 36 X 50367498 50367499 + In_Frame_Ins INS - - TGCTGCTGCTGT novel unknown TCGA-DC-6155-01A-11D-1657-10 TCGA-DC-6155-10A-01D-1657-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq b6fae581-493a-4b85-9d31-59fecbe1f8e0 7cdfa5f8-673c-4327-9d02-457330206a98