Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
SYCP2L	0	genome.wustl.edu	37	6	10961632	10961632	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	6	10961632	10961632	G	T	SNP	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	missense	c.2350	p.V784F	0.001	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157	tier1	-	-	106	1	0.93	17	35	67.31	139	0	0.00	36	41	53.25
CNR1	0	genome.wustl.edu	37	6	88853662	88853662	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	6	88853662	88853662	C	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.1332	p.R444S	1.000	pirsf_Canbinoid_rcpt_1,prints_Canbinoid_rcpt_1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432	tier1	-	-	48	0	0.00	21	14	40.00	93	0	0.00	53	26	32.91
SLC25A3P1	0	genome.wustl.edu	37	1	53904702	53904702	+	R	SNP	A	A	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	53904702	53904702	A	T	SNP	SLC25A3P1	ENST00000562700	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC25A3P1	HGNC	ENSG00000236253	tier1	-	-	22	0	0.00	14	11	44.00	51	0	0.00	42	17	28.33
C1orf106	0	genome.wustl.edu	37	1	200883099	200883099	+	R	SNP	T	T	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	200883099	200883099	T	C	SNP	C1orf106	ENST00000465162	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	C1orf106	HGNC	ENSG00000163362	tier1	-	-	28	0	0.00	18	9	33.33	62	0	0.00	68	39	36.11
CXCR1	0	genome.wustl.edu	37	2	219029327	219029327	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	219029327	219029327	C	T	SNP	CXCR1	ENST00000295683	human	ensembl	74_37	-1	known	missense	c.608	p.R203Q	0.997	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR1,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CXCR1	HGNC	ENSG00000163464	tier1	-	-	50	0	0.00	48	12	20.00	119	0	0.00	81	23	22.12
PITPNC1	0	genome.wustl.edu	37	17	65683225	65683225	+	Missense_Mutation	SNP	T	T	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	65683225	65683225	T	A	SNP	PITPNC1	ENST00000299954	human	ensembl	74_37	+1	known	missense	c.726	p.H242Q	1.000	pfam_PI_transfer	pfam_PI_transfer,prints_PI_transfer	-	no_errors	PITPNC1	HGNC	ENSG00000154217	tier1	-	-	67	0	0.00	61	25	29.07	108	0	0.00	68	50	42.37
ZNF521	0	genome.wustl.edu	37	18	22932142	22932142	+	R	SNP	G	G	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	18	22932142	22932142	G	C	SNP	ZNF521	ENST00000579111	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	65	0	0.00	39	18	31.03	33	0	0.00	33	13	28.26
SGOL2	0	genome.wustl.edu	37	2	201437697	201437697	+	Nonsense_Mutation	SNP	T	T	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	201437697	201437697	T	A	SNP	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	nonsense	c.2628	p.C876*	0.012	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	tier1	-	-	42	0	0.00	39	13	25.00	63	0	0.00	66	24	26.67
KRT23	0	genome.wustl.edu	37	17	39081634	39081634	+	Nonsense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	39081634	39081634	G	A	SNP	KRT23	ENST00000209718	human	ensembl	74_37	-1	known	nonsense	c.1114	p.R372*	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244	tier1	-	-	48	0	0.00	21	9	30.00	71	0	0.00	79	31	28.18
TLR4	0	genome.wustl.edu	37	9	120466787	120466787	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	120466787	120466787	C	A	SNP	TLR4	ENST00000355622	human	ensembl	74_37	+1	known	missense	c.37	p.P13T	0.720	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR4	HGNC	ENSG00000136869	tier1	-	-	19	0	0.00	20	5	20.00	28	0	0.00	21	13	38.24
OR6C2	0	genome.wustl.edu	37	12	55846256	55846256	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	12	55846256	55846256	G	T	SNP	OR6C2	ENST00000322678	human	ensembl	74_37	+1	known	missense	c.259	p.D87Y	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C2	HGNC	ENSG00000179695	tier1	-	-	74	0	0.00	45	22	32.84	87	0	0.00	70	33	32.04
CXorf57	0	genome.wustl.edu	37	X	105905498	105905498	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	X	105905498	105905498	C	T	SNP	CXorf57	ENST00000372548	human	ensembl	74_37	+1	known	silent	c.2232	p.S744	0.525	NULL	superfamily_-bd_OB-fold	-	no_errors	CXorf57	HGNC	ENSG00000147231	tier1	rs140805762	-	83	0	0.00	40	26	39.39	116	0	0.00	88	42	32.31
CDRT15L2	0	genome.wustl.edu	37	17	20483823	20483823	+	Silent	SNP	C	C	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	20483823	20483823	C	A	SNP	CDRT15L2	ENST00000399044	human	ensembl	74_37	+1	known	silent	c.627	p.T209	0.031	NULL	NULL	-	no_errors	CDRT15L2	HGNC	ENSG00000214819	tier1	-	-	54	0	0.00	68	20	22.73	58	0	0.00	95	12	11.21
RGAG4	0	genome.wustl.edu	37	X	71349949	71349949	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	X	71349949	71349949	G	A	SNP	RGAG4	ENST00000479991	human	ensembl	74_37	-1	known	missense	c.1442	p.T481I	0.206	NULL	pfam_Retrotrans_gag_dom	-	no_errors	RGAG4	HGNC	ENSG00000242732	tier1	-	-	89	0	0.00	41	32	43.84	109	0	0.00	78	61	43.88
PPP1R9B	0	genome.wustl.edu	37	17	48211791	48211791	+	R	SNP	T	T	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	48211791	48211791	T	C	SNP	PPP1R9B	ENST00000501501	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.464	-	-	-	no_errors	PPP1R9B	HGNC	ENSG00000108819	tier1	-	-	27	0	0.00	17	11	39.29	79	0	0.00	53	12	18.46
MKRN3	0	genome.wustl.edu	37	15	23811311	23811311	+	Missense_Mutation	SNP	A	A	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	15	23811311	23811311	A	T	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.382	p.T128S	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	tier1	-	-	53	0	0.00	39	12	23.53	23	0	0.00	19	8	29.63
CCDC87	0	genome.wustl.edu	37	11	66358959	66358959	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	11	66358959	66358959	C	G	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	missense	c.1528	p.D510H	0.358	NULL	pfam_MAP65_Ase1_PRC1	-	no_errors	CCDC87	HGNC	ENSG00000182791	tier1	-	-	96	0	0.00	46	27	36.99	94	0	0.00	74	46	38.33
ADAMTS20	0	genome.wustl.edu	37	12	43826172	43826172	+	Nonsense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	12	43826172	43826172	G	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	nonsense	c.3031	p.R1011*	0.669	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	rs200767698	-	50	0	0.00	43	16	27.12	93	0	0.00	76	24	23.76
UBQLNL	0	genome.wustl.edu	37	11	5537632	5537632	+	Missense_Mutation	SNP	T	T	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	11	5537632	5537632	T	C	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.40	p.S14G	0.138	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	49	0	0.00	32	9	21.95	41	0	0.00	38	18	32.14
KBTBD8	0	genome.wustl.edu	37	3	67049586	67049586	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	3	67049586	67049586	C	A	SNP	KBTBD8	ENST00000417314	human	ensembl	74_37	+1	known	missense	c.198	p.N66K	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD8	HGNC	ENSG00000163376	tier1	-	-	131	0	0.00	58	35	37.63	113	1	0.88	77	50	39.37
DAF1	0	genome.wustl.edu	37	16	84203706	84203706	+	Silent	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	16	84203706	84203706	G	A	SNP	DAF1	ENST00000378553	human	ensembl	74_37	+1	known	silent	c.1272	p.S424	0.000	NULL	NULL	-	no_errors	DAF1	HGNC	ENSG00000154099	tier1	-	-	111	1	0.89	59	11	15.71	73	0	0.00	54	8	12.70
PTGER2	0	genome.wustl.edu	37	14	52794155	52794155	+	Missense_Mutation	SNP	A	A	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	14	52794155	52794155	A	C	SNP	PTGER2	ENST00000245457	human	ensembl	74_37	+1	known	missense	c.1060	p.K354Q	0.956	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP2_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	PTGER2	HGNC	ENSG00000125384	tier1	-	-	50	0	0.00	12	9	42.86	104	0	0.00	14	24	63.16
NOBOX	0	genome.wustl.edu	37	7	144101737	144101737	+	Missense_Mutation	SNP	C	C	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	7	144101737	144101737	C	A	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	missense	c.122	p.G41V	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410	tier1	-	-	74	0	0.00	60	31	34.07	102	0	0.00	72	39	35.14
PLK4	0	genome.wustl.edu	37	4	128812805	128812805	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	4	128812805	128812805	C	T	SNP	PLK4	ENST00000270861	human	ensembl	74_37	+1	known	silent	c.2007	p.N669	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK4	HGNC	ENSG00000142731	tier1	-	-	260	0	0.00	155	106	40.61	99	1	1.00	58	28	32.18
FLJ36000	0	genome.wustl.edu	37	17	21911294	21911294	+	R	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	21911294	21911294	C	G	SNP	FLJ36000	ENST00000581223	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.089	-	-	-	no_errors	RP11-744K17.9	Clone_based_vega_gene	ENSG00000266795	tier1	-	-	11	0	0.00	4	5	55.56	55	0	0.00	93	32	25.20
A60	0	genome.wustl.edu	37	16	3434294	3434294	+	R	SNP	A	A	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	16	3434294	3434294	A	C	SNP	A60	ENST00000576906	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	A60	Uniprot_gn	ENSG00000262621	tier1	-	-	18	0	0.00	18	11	37.93	115	0	0.00	99	45	31.25
SUPT20H	0	genome.wustl.edu	37	13	37614582	37614582	+	Missense_Mutation	SNP	T	T	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	13	37614582	37614582	T	C	SNP	SUPT20H	ENST00000350612	human	ensembl	74_37	-1	known	missense	c.527	p.D176G	1.000	pfam_Spt20	pfam_Spt20	-	no_errors	SUPT20H	HGNC	ENSG00000102710	tier1	-	-	132	0	0.00	58	18	23.68	65	0	0.00	30	21	41.18
SPTAN1	0	genome.wustl.edu	37	9	131378035	131378035	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	131378035	131378035	C	T	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	missense	c.5273	p.A1758V	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694	tier1	-	-	49	0	0.00	42	21	33.33	94	0	0.00	51	40	43.96
METTL13	0	genome.wustl.edu	37	1	171755160	171755160	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	171755160	171755160	C	G	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1055	p.A352G	0.986	NULL	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165	tier1	-	-	58	0	0.00	26	15	36.59	64	0	0.00	34	23	40.35
ATP1A2	0	genome.wustl.edu	37	1	160100061	160100061	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	160100061	160100061	G	C	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.1631	p.G544A	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625	tier1	-	-	91	0	0.00	63	44	40.74	37	0	0.00	35	17	32.69
LONRF3	0	genome.wustl.edu	37	X	118124458	118124458	+	Missense_Mutation	SNP	A	A	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	X	118124458	118124458	A	T	SNP	LONRF3	ENST00000371628	human	ensembl	74_37	+1	known	missense	c.1350	p.K450N	0.000	NULL	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_TPR_repeat,smart_Znf_RING,smart_Pept_S16_N,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF3	HGNC	ENSG00000175556	tier1	-	-	38	0	0.00	56	7	11.11	77	0	0.00	102	13	11.30
NBPF22P	0	genome.wustl.edu	37	5	85581534	85581534	+	R	SNP	T	T	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	5	85581534	85581534	T	A	SNP	NBPF22P	ENST00000590707	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NBPF22P	HGNC	ENSG00000205449	tier1	-	-	237	0	0.00	190	39	17.03	13	0	0.00	19	4	17.39
NOBOX	0	genome.wustl.edu	37	7	144101743	144101743	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	7	144101743	144101743	A	G	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	missense	c.116	p.V39A	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410	tier1	-	-	71	0	0.00	64	31	32.63	104	0	0.00	71	40	36.04
DH7	0	genome.wustl.edu	37	2	196642547	196642547	+	Missense_Mutation	SNP	A	A	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	196642547	196642547	A	T	SNP	DH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.11041	p.Y3681N	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DH7	HGNC	ENSG00000118997	tier1	-	-	44	0	0.00	29	34	53.97	76	0	0.00	53	52	49.52
MUC12	0	genome.wustl.edu	37	7	100655696	100655696	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	7	100655696	100655696	G	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.15371	p.R5124K	0.000	pfam_SEA_dom	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	78	0	0.00	52	19	26.76	108	0	0.00	55	50	47.62
ABCA4	0	genome.wustl.edu	37	1	94544976	94544976	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	94544976	94544976	G	A	SNP	ABCA4	ENST00000370225	human	ensembl	74_37	-1	known	missense	c.1141	p.P381S	1.000	tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691	tier1	-	-	86	0	0.00	56	38	40.43	93	0	0.00	67	32	32.32
CRMP1	0	genome.wustl.edu	37	4	5857892	5857892	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	4	5857892	5857892	C	T	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	silent	c.798	p.L266	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1	-	-	62	0	0.00	37	19	33.93	105	0	0.00	74	27	26.73
MYO5B	0	genome.wustl.edu	37	18	47463703	47463703	+	Missense_Mutation	SNP	T	T	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	18	47463703	47463703	T	A	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	missense	c.1817	p.K606M	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306	tier1	-	-	76	0	0.00	54	32	37.21	85	0	0.00	69	30	30.30
PIGN	0	genome.wustl.edu	37	18	59739931	59739931	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	18	59739931	59739931	C	T	SNP	PIGN	ENST00000357637	human	ensembl	74_37	-1	known	missense	c.2647	p.G883S	1.000	pfam_GPI_EtnP_transferase_1_C	pfam_GPI_EtnP_transferase_1_C,pfam_Phosphodiest/P_Trfase,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	PIGN	HGNC	ENSG00000197563	tier1	-	-	112	0	0.00	58	29	33.33	50	0	0.00	47	9	16.07
PDE5A	0	genome.wustl.edu	37	4	120549677	120549677	+	Silent	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	4	120549677	120549677	G	A	SNP	PDE5A	ENST00000354960	human	ensembl	74_37	-1	known	silent	c.150	p.T50	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE5A	HGNC	ENSG00000138735	tier1	-	-	116	1	0.85	48	35	42.17	97	0	0.00	79	46	36.80
C1orf213	0	genome.wustl.edu	37	1	23695985	23695985	+	Silent	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	23695985	23695985	C	G	SNP	C1orf213	ENST00000335648	human	ensembl	74_37	+1	known	silent	c.195	p.V65	0.009	NULL	NULL	-	no_errors	C1orf213	HGNC	ENSG00000249087	tier1	-	-	72	0	0.00	47	27	36.49	65	0	0.00	42	27	39.13
MEDAG	0	genome.wustl.edu	37	13	31491582	31491582	+	Missense_Mutation	SNP	G	G	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	13	31491582	31491582	G	T	SNP	MEDAG	ENST00000380482	human	ensembl	74_37	+1	known	missense	c.321	p.R107S	1.000	NULL	NULL	-	no_errors	MEDAG	HGNC	ENSG00000102802	tier1	-	-	89	0	0.00	30	18	37.50	121	0	0.00	37	44	54.32
CRMP1	0	genome.wustl.edu	37	4	5857870	5857870	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	4	5857870	5857870	C	G	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	missense	c.820	p.G274R	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1	-	-	57	0	0.00	34	19	35.85	103	0	0.00	79	32	28.83
TP53	0	genome.wustl.edu	37	17	7577568	7577568	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	7577568	7577568	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.713	p.C238Y	1.000	pfam_p53_D-bd,superfamily_p53-like_TF_D-bd,prints_p53_tumour_suppressor	pfam_p53_D-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_D-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	52	0	0.00	15	11	42.31	83	0	0.00	14	18	56.25
C9orf3	0	genome.wustl.edu	37	9	97522564	97522564	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	97522564	97522564	C	T	SNP	C9orf3	ENST00000375315	human	ensembl	74_37	+1	known	silent	c.499	p.L167	0.998	NULL	pfam_Peptidase_M1_N,pfam_Peptidase_M1_C,superfamily_ARM-type_fold	-	no_errors	C9orf3	HGNC	ENSG00000148120	tier1	-	-	73	0	0.00	32	25	43.86	113	0	0.00	78	57	42.22
LOC100652824	0	genome.wustl.edu	37	2	202965106	202965106	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	202965106	202965106	C	T	SNP	LOC100652824	ENST00000541917	human	ensembl	74_37	+1	known	silent	c.1089	p.L363	0.516	NULL	NULL	-	no_errors	AC079354.1	Clone_based_vega_gene	ENSG00000182329	tier1	-	-	24	0	0.00	13	16	55.17	60	0	0.00	40	43	51.81
NRXN1	0	genome.wustl.edu	37	2	50280726	50280726	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	50280726	50280726	G	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.3787	p.R1263C	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	50	0	0.00	20	14	41.18	55	0	0.00	30	23	43.40
POLE	0	genome.wustl.edu	37	12	133252732	133252732	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	12	133252732	133252732	G	C	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.968	p.T323S	1.000	pfam_D-dir_D_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_D-dir_D_pol_B	pfam_D_pol_e_suA_C,pfam_D-dir_D_pol_B_exonuc,pfam_D-dir_D_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_D-dir_D_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1	-	-	67	0	0.00	36	20	35.71	152	0	0.00	96	39	28.26
PTPRQ	0	genome.wustl.edu	37	12	81015850	81015850	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	12	81015850	81015850	A	G	SNP	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	missense	c.5611	p.R1871G	1.000	NULL	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304	tier1	-	-	81	0	0.00	44	12	21.43	56	0	0.00	43	32	42.67
STK10	0	genome.wustl.edu	37	5	171583763	171583763	+	Silent	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	5	171583763	171583763	A	G	SNP	STK10	ENST00000176763	human	ensembl	74_37	-1	known	silent	c.186	p.A62	0.024	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_PKK,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK10	HGNC	ENSG00000072786	tier1	-	-	33	0	0.00	4	10	71.43	54	0	0.00	20	33	62.26
FNBP4	0	genome.wustl.edu	37	11	47776104	47776104	+	Silent	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	11	47776104	47776104	A	G	SNP	FNBP4	ENST00000263773	human	ensembl	74_37	-1	known	silent	c.426	p.D142	0.998	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	FNBP4	HGNC	ENSG00000109920	tier1	-	-	87	0	0.00	36	26	41.94	132	0	0.00	98	60	37.97
CTN2	0	genome.wustl.edu	37	2	80101392	80101392	+	Missense_Mutation	SNP	A	A	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	2	80101392	80101392	A	C	SNP	CTN2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.878	p.Q293P	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTN2	HGNC	ENSG00000066032	tier1	-	-	74	0	0.00	28	29	50.88	45	0	0.00	28	24	46.15
EFTUD1	0	genome.wustl.edu	37	15	82450161	82450161	+	Silent	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	15	82450161	82450161	G	A	SNP	EFTUD1	ENST00000268206	human	ensembl	74_37	-1	known	silent	c.1923	p.N641	1.000	superfamily_EFG_III-V	pfam_EF_GTP-bd_dom,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_EFG_III-V,superfamily_Transl_B-barrel,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFTUD1	HGNC	ENSG00000140598	tier1	-	-	81	0	0.00	94	28	22.95	109	0	0.00	76	33	30.28
IFNL1	0	genome.wustl.edu	37	19	39789057	39789057	+	Silent	SNP	T	T	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	19	39789057	39789057	T	A	SNP	IFNL1	ENST00000333625	human	ensembl	74_37	+1	known	silent	c.504	p.S168	0.881	NULL	NULL	-	no_errors	IFNL1	HGNC	ENSG00000182393	tier1	-	-	158	0	0.00	54	51	47.66	71	0	0.00	36	19	34.55
PTGER2	0	genome.wustl.edu	37	14	52794162	52794166	+	Frame_Shift_Del	DEL	CTGAC	CTGAC	-			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	CTGAC	CTGAC	CTGAC	-	CTGAC	CTGAC	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	14	52794162	52794166	CTGAC	-	DEL	PTGER2	ENST00000245457	human	ensembl	74_37	+1	known	frame_shift_del	c.1067_1071	p.D357fs	0.018:0.888:0.956:0.966:0.958	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP2_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	PTGER2	HGNC	ENSG00000125384	tier1			103	0	0.00	15	22	59.46	103	0	0.00	15	22	59.46
COL22A1	0	genome.wustl.edu	37	8	139767724	139767724	+	Splice_Site	DEL	C	C	-			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	8	139767724	139767724	C	-	DEL	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	splice_site_del	c.1977+1	e19+1	1.000	-	-	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1			89	0	0.00	56	19	25.33	92	0	0.00	56	33	37.08
BAHCC1	0	genome.wustl.edu	37	17	79411747	79411747	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	79411747	79411747	G	A	SNP	BAHCC1	ENST00000307745	human	ensembl	74_37	+1	known	missense	c.2566	p.V856M	0.993	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	RP11-1055B8.7	Clone_based_vega_gene	ENSG00000171282	tier1	-	-	13	0	0.00	5	6	54.55	17	0	0.00	8	6	42.86
BRSK2	0	genome.wustl.edu	37	11	1467009	1467009	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	11	1467009	1467009	C	G	SNP	BRSK2	ENST00000382179	human	ensembl	74_37	+1	known	missense	c.1236	p.D412E	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672	tier1	-	-	85	0	0.00	79	43	35.25	18	0	0.00	4	6	60.00
FAM53A	0	genome.wustl.edu	37	4	1670402	1670402	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	4	1670402	1670402	C	T	SNP	FAM53A	ENST00000308132	human	ensembl	74_37	-1	known	missense	c.67	p.A23T	0.946	NULL	NULL	-	no_errors	FAM53A	HGNC	ENSG00000174137	tier1	-	-	47	0	0.00	20	22	52.38	11	0	0.00	7	5	41.67
HID1	0	genome.wustl.edu	37	17	72950352	72950352	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	17	72950352	72950352	C	T	SNP	HID1	ENST00000425042	human	ensembl	74_37	-1	known	missense	c.1745	p.R582Q	0.927	NULL	pfam_Dymeclin	-	no_errors	HID1	HGNC	ENSG00000167861	tier1	-	-	50	0	0.00	32	35	52.24	7	0	0.00	0	4	100.00
HTR6	0	genome.wustl.edu	37	1	19992517	19992517	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	19992517	19992517	C	T	SNP	HTR6	ENST00000289753	human	ensembl	74_37	+1	known	missense	c.271	p.R91C	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT6_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT6_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR6	HGNC	ENSG00000158748	tier1	rs201177761	-	24	0	0.00	11	6	35.29	15	0	0.00	2	13	86.67
ZNF700	0	genome.wustl.edu	37	19	12060266	12060266	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	19	12060266	12060266	G	A	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	missense	c.1427	p.C476Y	0.514	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757	tier1	-	-	54	0	0.00	11	12	52.17	49	0	0.00	7	20	74.07
RGMB	0	genome.wustl.edu	37	5	98115446	98115446	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	5	98115446	98115446	G	A	SNP	RGMB	ENST00000308234	human	ensembl	74_37	+1	known	missense	c.422	p.R141H	1.000	pfam_RGM_N	pfam_RGM_C,pfam_RGM_N	-	no_errors	RGMB	HGNC	ENSG00000174136	tier1	rs35699029	-	43	0	0.00	54	6	10.00	73	0	0.00	90	8	8.16
TIAL1	0	genome.wustl.edu	37	10	121341975	121341975	+	Missense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	10	121341975	121341975	C	T	SNP	TIAL1	ENST00000369093	human	ensembl	74_37	-1	known	missense	c.275	p.G92E	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TIAL1	HGNC	ENSG00000151923	tier1	-	-	39	0	0.00	14	6	30.00	87	0	0.00	53	5	8.62
ALPL	0	genome.wustl.edu	37	1	21887130	21887130	+	Missense_Mutation	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	21887130	21887130	G	A	SNP	ALPL	ENST00000374832	human	ensembl	74_37	+1	known	missense	c.73	p.D25N	1.000	superfamily_Alkaline_phosphatase_core	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPL	HGNC	ENSG00000162551	tier1	-	-	60	0	0.00	57	8	12.31	91	0	0.00	58	4	6.45
CROCC	0	genome.wustl.edu	37	1	17263172	17263172	+	Nonsense_Mutation	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	17263172	17263172	C	T	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	nonsense	c.997	p.R333*	0.350	NULL	superfamily_Prefoldin,superfamily_t-SRE	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1	-	-	83	0	0.00	36	4	10.00	6	0	0.00	4	0	0.00
MAMDC4	0	genome.wustl.edu	37	9	139748197	139748197	+	R	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	139748197	139748197	C	T	SNP	MAMDC4	ENST00000485732	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MAMDC4	HGNC	ENSG00000177943	tier1	-	-	75	0	0.00	42	25	36.76	6	0	0.00	9	1	10.00
FAM138C	0	genome.wustl.edu	37	9	35199	35199	+	R	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	35199	35199	A	G	SNP	FAM138C	ENST00000305248	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM138C	HGNC	ENSG00000218839	tier1	-	-	31	0	0.00	24	4	14.29	0	0	0.00	0	0	0.00
FAM230A	0	genome.wustl.edu	37	22	20709186	20709186	+	Silent	SNP	C	C	T			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	22	20709186	20709186	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.918	p.A306	0.021	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	83	0	0.00	67	10	12.82	2	0	0.00	4	0	0.00
FAM230A	0	genome.wustl.edu	37	22	20709232	20709232	+	Missense_Mutation	SNP	G	G	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	22	20709232	20709232	G	C	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.964	p.E322Q	0.008	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	73	0	0.00	63	8	11.27	1	0	0.00	0	0	0.00
GOLGA8I	0	genome.wustl.edu	37	15	23264792	23264792	+	Missense_Mutation	SNP	A	A	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	15	23264792	23264792	A	G	SNP	GOLGA8I	ENST00000450802	human	ensembl	74_37	+1	known	missense	c.1396	p.K466E	1.000	NULL	NULL	-	no_errors	GOLGA8I	HGNC	ENSG00000153666	tier1	-	-	100	0	0.00	41	33	44.59	0	0	0.00	1	0	0.00
HCG18	0	genome.wustl.edu	37	6	30294912	30294912	+	R	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	6	30294912	30294912	G	A	SNP	HCG18	ENST00000426882	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.845	-	-	-	no_errors	HCG18	HGNC	ENSG00000231074	tier1	-	-	20	0	0.00	8	6	42.86	0	0	0.00	0	0	0.00
SRGAP2B	0	genome.wustl.edu	37	1	144013941	144013941	+	R	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	1	144013941	144013941	C	G	SNP	SRGAP2B	ENST00000467933	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SRGAP2B	HGNC	ENSG00000196369	tier1	-	-	121	0	0.00	104	12	10.34	140	0	0.00	174	2	1.14
XAB2	0	genome.wustl.edu	37	19	7691075	7691075	+	Missense_Mutation	SNP	T	T	C			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	19	7691075	7691075	T	C	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	missense	c.604	p.T202A	0.998	NULL	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924	tier1	-	-	41	0	0.00	34	5	12.82	35	0	0.00	37	2	5.13
EEF2K	0	genome.wustl.edu	37	16	22274469	22274469	+	Silent	SNP	G	G	A			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	16	22274469	22274469	G	A	SNP	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	silent	c.1338	p.E446	1.000	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	tier1	-	-	100	0	0.00	62	6	8.82	97	0	0.00	54	2	3.57
AK	0	genome.wustl.edu	37	9	117122049	117122049	+	Missense_Mutation	SNP	C	C	G			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	9	117122049	117122049	C	G	SNP	AK	ENST00000307564	human	ensembl	74_37	-1	known	missense	c.2317	p.E773Q	0.706	NULL	pfam_TF_AT-hook	-	no_errors	AK	HGNC	ENSG00000106948	tier1	-	-	36	0	0.00	34	4	10.53	34	0	0.00	23	2	8.00
TM9SF2	0	genome.wustl.edu	37	13	100192902	100192902	+	R	DEL	T	T	-			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	13	100192902	100192902	T	-	DEL	TM9SF2	ENST00000466555	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.045	-	-	-	no_errors	TM9SF2	HGNC	ENSG00000125304	tier1			22	0	0.00	17	2	10.53	98	0	0.00	142	2	1.39
MEF2C	0	genome.wustl.edu	37	5	88178836	88178836	+	R	DEL	G	G	-			TCGA-X6-A8C5-01A-11D-A36J-09	TCGA-X6-A8C5-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4cf1d985-f27a-4a23-879e-a10eb81baee0	97f61111-eda5-46fb-84f3-9b3f68f9617b	5	88178836	88178836	G	-	DEL	MEF2C	ENST00000509349	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MEF2C	HGNC	ENSG00000081189	tier1			27	0	0.00	17	2	10.53	71	0	0.00	65	3	4.41