Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name start stop reference variant type gene_name transcript_name transcript_species transcript_source transcript_version strand transcript_status trv_type c_position amino_acid_change ucsc_cons domain all_domains deletion_substructures transcript_error default_gene_name gene_name_source ensembl_gene_id tier title header normal_ref_reads normal_var_reads normal_VAF tumor_ref_reads tumor_var_reads tumor_VAF LCE2A 0 genome.wustl.edu 37 1 152671655 152671655 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 152671655 152671655 C A SNP LCE2A ENST00000368779 human ensembl 74_37 +1 known missense c.278 p.S93Y 0.000 NULL NULL - no_errors LCE2A HGNC ENSG00000187173 110 0 0 83 19 18.6275 ADAM15 0 genome.wustl.edu 37 1 155026661 155026661 + Silent SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 155026661 155026661 T C SNP ADAM15 ENST00000356955 human ensembl 74_37 +1 known silent c.378 p.Y126 0.001 pfam_Peptidase_M12B_N pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B - no_errors ADAM15 HGNC ENSG00000143537 257 0 0 198 72 26.6667 ARHGAP30 0 genome.wustl.edu 37 1 161018090 161018090 + Missense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 161018090 161018090 G T SNP ARHGAP30 ENST00000368013 human ensembl 74_37 -1 known missense c.2721 p.D907E 0.045 NULL pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom - no_errors ARHGAP30 HGNC ENSG00000186517 85 0 0 72 62 46.2687 TEX35 0 genome.wustl.edu 37 1 178489948 178489948 + Missense_Mutation SNP T T G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 178489948 178489948 T G SNP TEX35 ENST00000319416 human ensembl 74_37 +1 known missense c.482 p.M161R 0.000 NULL NULL - no_errors TEX35 HGNC ENSG00000240021 86 0 0 66 5 7.04225 LAMC2 0 genome.wustl.edu 37 1 183208626 183208626 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 183208626 183208626 C T SNP LAMC2 ENST00000264144 human ensembl 74_37 +1 known silent c.2997 p.S999 0.805 NULL pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin - no_errors LAMC2 HGNC ENSG00000058085 256 0 0 131 38 22.4852 USH2A 0 genome.wustl.edu 37 1 216262463 216262463 + Missense_Mutation SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 216262463 216262463 T C SNP USH2A ENST00000366943 human ensembl 74_37 -1 known missense c.4777 p.T1593A 0.949 pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Laminin_G,pfscan_Laminin_G pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N - no_errors USH2A HGNC ENSG00000042781 247 0 0 290 33 10.2167 ZP4 0 genome.wustl.edu 37 1 238053244 238053244 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 238053244 238053244 C A SNP ZP4 ENST00000366570 human ensembl 74_37 -1 known missense c.323 p.G108V 0.006 NULL pfam_ZP_dom,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom - no_errors ZP4 HGNC ENSG00000116996 420 0 0 204 287 58.4521 RUNX3 0 genome.wustl.edu 37 1 25229007 25229007 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 25229007 25229007 G A SNP RUNX3 ENST00000338888 human ensembl 74_37 -1 known missense c.896 p.S299L 1.000 pirsf_TF_Runt-rel_RUNX pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt - no_errors RUNX3 HGNC ENSG00000020633 87 0 0 28 25 47.1698 AGO4 0 genome.wustl.edu 37 1 36306902 36306902 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 36306902 36306902 G A SNP AGO4 ENST00000373210 human ensembl 74_37 +1 known missense c.1861 p.V621I 1.000 pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi - no_errors AGO4 HGNC ENSG00000134698 103 0 0 70 5 6.66667 DHCR24 0 genome.wustl.edu 37 1 55349369 55349369 + Silent SNP A A T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 1 55349369 55349369 A T SNP DHCR24 ENST00000371269 human ensembl 74_37 -1 known silent c.309 p.R103 0.742 superfamily_FAD-bd_2 pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2 - no_errors DHCR24 HGNC ENSG00000116133 309 1 0.322581 132 60 31.25 NEBL 0 genome.wustl.edu 37 10 21101831 21101831 + Missense_Mutation SNP T T A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 21101831 21101831 T A SNP NEBL ENST00000377122 human ensembl 74_37 -1 known missense c.2385 p.R795S 0.173 NULL pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain - no_errors NEBL HGNC ENSG00000078114 131 0 0 89 40 31.0078 ADAMTS14 0 genome.wustl.edu 37 10 72500888 72500888 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 72500888 72500888 C A SNP ADAMTS14 ENST00000373208 human ensembl 74_37 +1 known missense c.1903 p.H635N 1.000 NULL pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS - no_errors ADAMTS14 HGNC ENSG00000138316 57 0 0 35 8 18.6047 SEC24C 0 genome.wustl.edu 37 10 75526139 75526139 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 75526139 75526139 G A SNP SEC24C ENST00000339365 human ensembl 74_37 +1 known missense c.1639 p.V547I 1.000 pfam_Sec23/24_trunk_dom pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24 - no_errors SEC24C HGNC ENSG00000176986 111 0 0 52 35 40.2299 GATA3 0 genome.wustl.edu 37 10 8100408 8100408 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 8100408 8100408 G A SNP GATA3 ENST00000379328 human ensembl 74_37 +1 known missense c.382 p.G128R 1.000 pirsf_TF_GATA-1/2/3 pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA - no_errors GATA3 HGNC ENSG00000107485 119 0 0 87 14 13.8614 GATA3 0 genome.wustl.edu 37 10 8100563 8100563 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 8100563 8100563 C T SNP GATA3 ENST00000379328 human ensembl 74_37 +1 known silent c.537 p.D179 0.101 pirsf_TF_GATA-1/2/3 pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA - no_errors GATA3 HGNC ENSG00000107485 77 0 0 55 10 15.3846 ZNF518A 0 genome.wustl.edu 37 10 97918089 97918089 + RNA SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 10 97918089 97918089 C A SNP ZNF518A ENST00000316045 human ensembl 74_37 +1 known rna NULL NULL 0.257 - - - no_errors ZNF518A HGNC ENSG00000177853 210 0 0 198 37 15.7447 NXPE4 0 genome.wustl.edu 37 11 114441717 114441717 + Missense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 114441717 114441717 G T SNP NXPE4 ENST00000375478 human ensembl 74_37 -1 known missense c.1578 p.H526Q 1.000 NULL pfam_NXPH/NXPE,superfamily_Ig_E-set - no_errors NXPE4 HGNC ENSG00000137634 171 0 0 53 50 48.5437 KCNJ5 0 genome.wustl.edu 37 11 128786552 128786552 + Missense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 128786552 128786552 G T SNP KCNJ5 ENST00000529694 human ensembl 74_37 +1 known missense c.1186 p.A396S 0.000 pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4 pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4 - no_errors KCNJ5 HGNC ENSG00000120457 84 0 0 42 15 26.3158 SPON1 0 genome.wustl.edu 37 11 14264896 14264896 + RNA SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 14264896 14264896 G A SNP SPON1 ENST00000310358 human ensembl 74_37 +1 known rna NULL NULL 1.000 - - - no_errors SPON1 HGNC ENSG00000152268 17 0 0 3 3 50 MRGPRX4 0 genome.wustl.edu 37 11 18194989 18194989 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 18194989 18194989 C T SNP MRGPRX4 ENST00000314254 human ensembl 74_37 +1 known silent c.186 p.S62 0.003 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn - no_errors MRGPRX4 HGNC ENSG00000179817 154 0 0 88 38 30.1587 TSG101 0 genome.wustl.edu 37 11 18505470 18505470 + Missense_Mutation SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 18505470 18505470 T C SNP TSG101 ENST00000251968 human ensembl 74_37 -1 known missense c.790 p.K264E 1.000 NULL pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD - no_errors TSG101 HGNC ENSG00000074319 714 0 0 340 151 30.7536 OR5AP2 0 genome.wustl.edu 37 11 56409733 56409733 + Silent SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 56409733 56409733 G T SNP OR5AP2 ENST00000544374 human ensembl 74_37 -1 known silent c.186 p.L62 0.844 pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn - no_errors OR5AP2 HGNC ENSG00000172464 127 0 0 37 38 50.6667 KLC2 0 genome.wustl.edu 37 11 66026277 66026277 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 66026277 66026277 G A SNP KLC2 ENST00000316924 human ensembl 74_37 +1 known missense c.212 p.G71E 1.000 pfam_Rabaptin_Rab5-bd_dom pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom - no_errors KLC2 HGNC ENSG00000174996 91 0 0 38 12 24 TAF1D 0 genome.wustl.edu 37 11 93469428 93469428 + Missense_Mutation SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 11 93469428 93469428 T C SNP TAF1D ENST00000323981 human ensembl 74_37 -1 known missense c.736 p.S246G 0.002 NULL NULL - no_errors TAF1D HGNC ENSG00000166012 144 0 0 81 40 33.0579 HIP1R 0 genome.wustl.edu 37 12 123342783 123342783 + Silent SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 12 123342783 123342783 T C SNP HIP1R ENST00000253083 human ensembl 74_37 +1 known silent c.1950 p.C650 1.000 NULL pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom - no_errors HIP1R HGNC ENSG00000130787 36 0 0 18 12 40 ABCC9 0 genome.wustl.edu 37 12 22012551 22012551 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 12 22012551 22012551 G A SNP ABCC9 ENST00000261200 human ensembl 74_37 -1 known missense c.2474 p.A825V 1.000 pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2 - no_errors ABCC9 HGNC ENSG00000069431 349 0 0 328 940 74.1325 KRT8 0 genome.wustl.edu 37 12 53291239 53291239 + Silent SNP A A G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 12 53291239 53291239 A G SNP KRT8 ENST00000293308 human ensembl 74_37 -1 known silent c.1425 p.S475 0.057 NULL pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I - no_errors KRT8 HGNC ENSG00000170421 90 0 0 68 8 10.5263 KRT8 0 genome.wustl.edu 37 12 53291266 53291266 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 12 53291266 53291266 G A SNP KRT8 ENST00000293308 human ensembl 74_37 -1 known silent c.1398 p.I466 0.859 NULL pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I - no_errors KRT8 HGNC ENSG00000170421 97 0 0 72 12 14.2857 LIG4 0 genome.wustl.edu 37 13 108861879 108861879 + Missense_Mutation SNP G G C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 13 108861879 108861879 G C SNP LIG4 ENST00000356922 human ensembl 74_37 -1 known missense c.1738 p.R580G 1.000 pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,tigrfam_DNA_ligase_ATP-dep pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_IV,pfam_BRCT_dom,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep - no_errors LIG4 HGNC ENSG00000174405 137 0 0 131 28 17.6101 PAN3 0 genome.wustl.edu 37 13 28830630 28830630 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 13 28830630 28830630 C T SNP PAN3 ENST00000380958 human ensembl 74_37 +1 known missense c.1202 p.T401M 1.000 NULL superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom - no_errors PAN3 HGNC ENSG00000152520 208 0 0 123 79 39.1089 LGMN 0 genome.wustl.edu 37 14 93178266 93178266 + Silent SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 14 93178266 93178266 C A SNP LGMN ENST00000334869 human ensembl 74_37 -1 known silent c.645 p.S215 0.007 pfam_Peptidase_C13 pfam_Peptidase_C13,prints_Peptidase_C13 - no_errors LGMN HGNC ENSG00000100600 181 0 0 132 21 13.7255 ITPK1 0 genome.wustl.edu 37 14 93483134 93483134 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 14 93483134 93483134 G A SNP ITPK1 ENST00000267615 human ensembl 74_37 -1 known missense c.133 p.R45W 1.000 pfam_Inositol_tetrakis-P_1-kinase pfam_Inositol_tetrakis-P_1-kinase - no_errors ITPK1 HGNC ENSG00000100605 117 0 0 70 14 16.6667 IL16 0 genome.wustl.edu 37 15 81565490 81565490 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 15 81565490 81565490 C T SNP IL16 ENST00000302987 human ensembl 74_37 +1 known silent c.735 p.Y245 0.985 pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_IL-16 - no_errors IL16 HGNC ENSG00000172349 85 0 0 71 6 7.79221 SLC12A4 0 genome.wustl.edu 37 16 67984928 67984928 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 16 67984928 67984928 G A SNP SLC12A4 ENST00000422611 human ensembl 74_37 -1 known missense c.1339 p.R447C 0.341 pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS - no_errors SLC12A4 HGNC ENSG00000124067 114 0 0 62 11 15.0685 ADAT1 0 genome.wustl.edu 37 16 75642762 75642762 + Nonsense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 16 75642762 75642762 G A SNP ADAT1 ENST00000307921 human ensembl 74_37 -1 known nonsense c.1168 p.R390* 0.656 pfam_A_deamin,smart_A_deamin,pfscan_A_deamin pfam_A_deamin,smart_A_deamin,pfscan_A_deamin - no_errors ADAT1 HGNC ENSG00000065457 123 0 0 60 12 16.6667 GRIN2A 0 genome.wustl.edu 37 16 9857896 9857896 + Silent SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 16 9857896 9857896 G T SNP GRIN2A ENST00000330684 human ensembl 74_37 -1 known silent c.3505 p.R1169 1.000 pfam_NMDAR2_C pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt - no_errors GRIN2A HGNC ENSG00000183454 385 1 0.259067 168 175 51.0204 MYH3 0 genome.wustl.edu 37 17 10538727 10538727 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 17 10538727 10538727 C T SNP MYH3 ENST00000226209 human ensembl 74_37 -1 known missense c.4129 p.E1377K 1.000 pfam_Myosin_tail pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom - no_errors MYH3 HGNC ENSG00000109063 265 0 0 168 101 37.5465 FAM222B 0 genome.wustl.edu 37 17 27085667 27085667 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 17 27085667 27085667 C T SNP FAM222B ENST00000341217 human ensembl 74_37 -1 known missense c.1310 p.G437D 1.000 NULL NULL - no_errors FAM222B HGNC ENSG00000173065 42 0 0 34 2 5.55556 CHD3 0 genome.wustl.edu 37 17 7796749 7796749 + Missense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 17 7796749 7796749 G T SNP CHD3 ENST00000330494 human ensembl 74_37 +1 known missense c.655 p.A219S 1.000 superfamily_HMG_box_dom pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow - no_errors CHD3 HGNC ENSG00000170004 26 0 0 21 5 19.2308 C17orf70 0 genome.wustl.edu 37 17 79517825 79517825 + Missense_Mutation SNP T T G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 17 79517825 79517825 T G SNP C17orf70 ENST00000327787 human ensembl 74_37 -1 known missense c.695 p.D232A 0.943 NULL NULL - no_errors C17orf70 HGNC ENSG00000185504 59 0 0 29 6 17.1429 DCC 0 genome.wustl.edu 37 18 50589747 50589747 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 18 50589747 50589747 C A SNP DCC ENST00000442544 human ensembl 74_37 +1 known missense c.1058 p.T353K 0.591 pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom - no_errors DCC HGNC ENSG00000187323 522 1 0.191205 153 197 56.2857 CETN1 0 genome.wustl.edu 37 18 580882 580882 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 18 580882 580882 C T SNP CETN1 ENST00000327228 human ensembl 74_37 +1 known silent c.474 p.N158 1.000 pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom - no_errors CETN1 HGNC ENSG00000177143 101 0 0 35 12 25.5319 ICAM4 0 genome.wustl.edu 37 19 10398284 10398284 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 19 10398284 10398284 C T SNP ICAM4 ENST00000380770 human ensembl 74_37 +1 known missense c.467 p.T156M 0.768 prints_ICAM_VCAM_N pfam_ICAM_N,prints_ICAM_VCAM_N - no_errors ICAM4 HGNC ENSG00000105371 98 0 0 49 12 19.6721 ZNF676 0 genome.wustl.edu 37 19 22364289 22364289 + Missense_Mutation SNP T T A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 19 22364289 22364289 T A SNP ZNF676 ENST00000397121 human ensembl 74_37 -1 known missense c.230 p.E77V 0.009 NULL pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF676 HGNC ENSG00000196109 210 0 0 117 36 23.5294 C3 0 genome.wustl.edu 37 19 6707247 6707247 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 19 6707247 6707247 C A SNP C3 ENST00000245907 human ensembl 74_37 -1 known missense c.2085 p.E695D 0.333 pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain - no_errors C3 HGNC ENSG00000125730 28 0 0 13 7 35 XIRP2 0 genome.wustl.edu 37 2 168100923 168100923 + Missense_Mutation SNP A A C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 2 168100923 168100923 A C SNP XIRP2 ENST00000295237 human ensembl 74_37 +1 known missense c.3021 p.E1007D 0.999 NULL pfam_Actin-binding_Xin_repeat - no_errors XIRP2 HGNC ENSG00000163092 161 0 0 71 26 26.8041 TTLL4 0 genome.wustl.edu 37 2 219610881 219610881 + Missense_Mutation SNP A A G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 2 219610881 219610881 A G SNP TTLL4 ENST00000258398 human ensembl 74_37 +1 known missense c.1901 p.N634S 1.000 NULL pfam_TTL/TTLL_fam - no_errors TTLL4 HGNC ENSG00000135912 345 0 0 141 80 36.1991 C2orf78 0 genome.wustl.edu 37 2 74042660 74042660 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 2 74042660 74042660 C T SNP C2orf78 ENST00000409561 human ensembl 74_37 +1 novel missense c.1310 p.S437F 0.002 NULL NULL - no_errors C2orf78 HGNC ENSG00000187833 103 0 0 82 23 21.9048 L3MBTL1 0 genome.wustl.edu 37 20 42168807 42168807 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 42168807 42168807 C T SNP L3MBTL1 ENST00000418998 human ensembl 74_37 +1 known silent c.2124 p.V708 0.004 NULL pfam_Mbt,pfam_Znf_C2HC,superfamily_SAM/pointed,smart_Mbt,pfscan_Mbt - no_errors L3MBTL1 HGNC ENSG00000185513 81 0 0 52 10 16.129 TSHZ2 0 genome.wustl.edu 37 20 51871800 51871800 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51871800 51871800 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known silent c.1803 p.K601 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 227 0 0 2918 619 17.5007 TSHZ2 0 genome.wustl.edu 37 20 51871810 51871810 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51871810 51871810 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.1813 p.E605K 0.167 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 208 0 0 2853 586 17.0398 TSHZ2 0 genome.wustl.edu 37 20 51871813 51871813 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51871813 51871813 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.1816 p.D606N 0.999 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 207 0 0 2830 554 16.3712 TSHZ2 0 genome.wustl.edu 37 20 51871968 51871968 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51871968 51871968 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known silent c.1971 p.L657 0.371 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 110 0 0 1360 318 18.9511 TSHZ2 0 genome.wustl.edu 37 20 51872223 51872223 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872223 51872223 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known silent c.2226 p.L742 0.944 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 114 0 0 1422 361 20.2468 TSHZ2 0 genome.wustl.edu 37 20 51872454 51872454 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872454 51872454 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2457 p.M819I 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 167 0 0 2186 440 16.7555 TSHZ2 0 genome.wustl.edu 37 20 51872466 51872466 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872466 51872466 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2469 p.M823I 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 172 0 0 2180 424 16.2826 TSHZ2 0 genome.wustl.edu 37 20 51872467 51872467 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872467 51872467 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2470 p.D824N 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 171 0 0 2175 423 16.2818 TSHZ2 0 genome.wustl.edu 37 20 51872482 51872482 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872482 51872482 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2485 p.E829K 1.000 superfamily_Homeodomain-like superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 168 0 0 2133 435 16.9393 TSHZ2 0 genome.wustl.edu 37 20 51872676 51872676 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872676 51872676 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2679 p.M893I 1.000 superfamily_Homeodomain-like,smart_Homeobox_dom superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 134 0 0 1865 381 16.9635 TSHZ2 0 genome.wustl.edu 37 20 51872755 51872755 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872755 51872755 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2758 p.D920N 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 127 0 0 1700 322 15.9248 TSHZ2 0 genome.wustl.edu 37 20 51872804 51872804 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872804 51872804 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2807 p.R936K 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 125 0 0 1665 289 14.7902 TSHZ2 0 genome.wustl.edu 37 20 51872833 51872833 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872833 51872833 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2836 p.E946K 1.000 smart_Znf_C2H2-like,pfscan_Znf_C2H2 superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 131 0 0 1543 238 13.3633 TSHZ2 0 genome.wustl.edu 37 20 51872856 51872856 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872856 51872856 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2859 p.M953I 1.000 pfscan_Znf_C2H2 superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 131 0 0 1547 218 12.3513 TSHZ2 0 genome.wustl.edu 37 20 51872865 51872865 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872865 51872865 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2868 p.M956I 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 123 0 0 1485 200 11.8694 TSHZ2 0 genome.wustl.edu 37 20 51872905 51872905 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872905 51872905 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2908 p.E970K 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 101 0 0 1282 142 9.97191 TSHZ2 0 genome.wustl.edu 37 20 51872907 51872907 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872907 51872907 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known silent c.2910 p.E970 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 99 0 0 1259 142 10.1356 TSHZ2 0 genome.wustl.edu 37 20 51872931 51872931 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872931 51872931 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known silent c.2934 p.Q978 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 86 0 0 1166 105 8.26121 TSHZ2 0 genome.wustl.edu 37 20 51872968 51872968 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 20 51872968 51872968 G A SNP TSHZ2 ENST00000371497 human ensembl 74_37 +1 known missense c.2971 p.D991N 1.000 NULL superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2 - no_errors TSHZ2 HGNC ENSG00000182463 110 0 0 1477 84 5.38117 COL6A6 0 genome.wustl.edu 37 3 130282057 130282057 + Missense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 3 130282057 130282057 G T SNP COL6A6 ENST00000358511 human ensembl 74_37 +1 known missense c.210 p.Q70H 1.000 pfam_VWF_A,smart_VWF_A,pfscan_VWF_A pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A - no_errors COL6A6 HGNC ENSG00000206384 168 1 0.591716 90 35 28 MED12L 0 genome.wustl.edu 37 3 150877763 150877763 + Missense_Mutation SNP A A T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 3 150877763 150877763 A T SNP MED12L ENST00000474524 human ensembl 74_37 +1 known missense c.982 p.S328C 0.553 pfam_Mediator_Med12_LCEWAV pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd - no_errors MED12L HGNC ENSG00000144893 215 0 0 135 29 17.6829 CCR1 0 genome.wustl.edu 37 3 46245463 46245463 + Nonsense_Mutation SNP G G T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 3 46245463 46245463 G T SNP CCR1 ENST00000296140 human ensembl 74_37 -1 known nonsense c.342 p.Y114* 0.000 pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR5,prints_NPY_rcpt,prints_ATII_rcpt - no_errors CCR1 HGNC ENSG00000163823 196 0 0 83 28 25.2252 LHFPL4 0 genome.wustl.edu 37 3 9547696 9547696 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 3 9547696 9547696 G A SNP LHFPL4 ENST00000287585 human ensembl 74_37 -1 known missense c.598 p.R200W 1.000 pfam_Lipome_HGMIC_fus_partner-like pfam_Lipome_HGMIC_fus_partner-like - no_errors LHFPL4 HGNC ENSG00000156959 182 0 0 64 43 40.1869 ZFP42 0 genome.wustl.edu 37 4 188923983 188923983 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 4 188923983 188923983 C T SNP ZFP42 ENST00000326866 human ensembl 74_37 +1 known missense c.22 p.R8W 0.003 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors ZFP42 HGNC ENSG00000179059 133 0 0 63 25 28.4091 PTPN13 0 genome.wustl.edu 37 4 87610306 87610306 + Missense_Mutation SNP A A G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 4 87610306 87610306 A G SNP PTPN13 ENST00000436978 human ensembl 74_37 +1 known missense c.509 p.K170R 1.000 pirsf_Tyr_Pase_non-rcpt_typ-13,smart_KIND pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt - no_errors PTPN13 HGNC ENSG00000163629 279 0 0 112 35 23.8095 TSLP 0 genome.wustl.edu 37 5 110407621 110407621 + Splice_Site SNP A A T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 5 110407621 110407621 A T SNP TSLP ENST00000420978 human ensembl 74_37 +1 putative splice_site c.35-2 e2-2 0.985 - - - no_errors TSLP HGNC ENSG00000145777 304 0 0 116 82 41.4141 RNF145 0 genome.wustl.edu 37 5 158585955 158585955 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 5 158585955 158585955 G A SNP RNF145 ENST00000518802 human ensembl 74_37 -1 known missense c.1805 p.P602L 1.000 pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING - no_errors RNF145 HGNC ENSG00000145860 116 0 0 82 30 26.7857 ZNF354C 0 genome.wustl.edu 37 5 178506747 178506747 + Missense_Mutation SNP A A C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 5 178506747 178506747 A C SNP ZNF354C ENST00000315475 human ensembl 74_37 +1 known missense c.1314 p.K438N 0.971 pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF354C HGNC ENSG00000177932 203 0 0 142 37 20.6704 FAM81B 0 genome.wustl.edu 37 5 94749724 94749724 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 5 94749724 94749724 C T SNP FAM81B ENST00000283357 human ensembl 74_37 +1 known missense c.367 p.R123C 1.000 NULL NULL - no_errors FAM81B HGNC ENSG00000153347 163 1 0.609756 106 47 30.719 HIST1H2AG 0 genome.wustl.edu 37 6 27101031 27101031 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 27101031 27101031 G A SNP HIST1H2AG ENST00000359193 human ensembl 74_37 +1 known missense c.181 p.A61T 1.000 pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A - no_errors HIST1H2AG HGNC ENSG00000196787 79 0 0 56 14 20 TNF 0 genome.wustl.edu 37 6 31545010 31545010 + Missense_Mutation SNP T T G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 31545010 31545010 T G SNP TNF ENST00000449264 human ensembl 74_37 +1 known missense c.398 p.L133R 1.000 pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF_alpha,prints_TNF - no_errors TNF HGNC ENSG00000232810 187 0 0 109 28 20.438 SLC26A8 0 genome.wustl.edu 37 6 35919039 35919039 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 35919039 35919039 G A SNP SLC26A8 ENST00000355574 human ensembl 74_37 -1 known silent c.2373 p.A791 0.679 pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom - no_errors SLC26A8 HGNC ENSG00000112053 179 0 0 68 67 49.6296 SLC26A8 0 genome.wustl.edu 37 6 35987480 35987480 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 35987480 35987480 G A SNP SLC26A8 ENST00000355574 human ensembl 74_37 -1 known missense c.5 p.A2V 0.221 NULL pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom - no_errors SLC26A8 HGNC ENSG00000112053 57 0 0 34 15 30.6122 DEFB112 0 genome.wustl.edu 37 6 50016324 50016324 + Missense_Mutation SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 50016324 50016324 T C SNP DEFB112 ENST00000322246 human ensembl 74_37 -1 known missense c.41 p.K14R 0.000 NULL NULL - no_errors DEFB112 HGNC ENSG00000180872 190 0 0 85 25 22.7273 USP45 0 genome.wustl.edu 37 6 99894207 99894207 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 6 99894207 99894207 G A SNP USP45 ENST00000327681 human ensembl 74_37 -1 known missense c.1441 p.R481C 0.000 pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67 pfam_Peptidase_C19/C67,pfam_Znf_UBP,superfamily_Znf_FYVE_PHD,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67 - no_errors USP45 HGNC ENSG00000123552 161 0 0 102 22 17.7419 AIMP2 0 genome.wustl.edu 37 7 6063309 6063309 + Missense_Mutation SNP A A C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 7 6063309 6063309 A C SNP AIMP2 ENST00000223029 human ensembl 74_37 +1 known missense c.950 p.K317T 0.008 superfamily_Glutathione-S-Trfase_C-like superfamily_Glutathione-S-Trfase_C-like - no_errors AIMP2 HGNC ENSG00000106305 114 0 0 72 12 14.2857 PTPN12 0 genome.wustl.edu 37 7 77256920 77256920 + Missense_Mutation SNP A A G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 A A Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 7 77256920 77256920 A G SNP PTPN12 ENST00000248594 human ensembl 74_37 +1 known missense c.1924 p.T642A 1.000 pirsf_Ptpn_12 pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Ptpn_12,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt - no_errors PTPN12 HGNC ENSG00000127947 160 1 0.621118 91 22 19.469 RGS20 0 genome.wustl.edu 37 8 54791954 54791954 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 8 54791954 54791954 G A SNP RGS20 ENST00000297313 human ensembl 74_37 +1 known missense c.302 p.R101H 0.015 NULL pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom - no_errors RGS20 HGNC ENSG00000147509 63 0 0 54 25 31.6456 XKR4 0 genome.wustl.edu 37 8 56015093 56015093 + Silent SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 8 56015093 56015093 C T SNP XKR4 ENST00000327381 human ensembl 74_37 +1 known silent c.45 p.S15 1.000 NULL pfam_Transport_prot_XK - no_errors XKR4 HGNC ENSG00000206579 42 0 0 19 12 38.7097 VCPIP1 0 genome.wustl.edu 37 8 67577533 67577533 + Missense_Mutation SNP G G C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 8 67577533 67577533 G C SNP VCPIP1 ENST00000310421 human ensembl 74_37 -1 known missense c.1661 p.S554C 1.000 NULL pfam_OTU,pfscan_OTU - no_errors VCPIP1 HGNC ENSG00000175073 508 0 0 528 84 13.7255 ERMP1 0 genome.wustl.edu 37 9 5805111 5805111 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 9 5805111 5805111 G A SNP ERMP1 ENST00000339450 human ensembl 74_37 -1 known silent c.1830 p.L610 0.938 NULL pfam_Peptidase_M28,pfam_Peptidase_M20 - no_errors ERMP1 HGNC ENSG00000099219 102 0 0 65 11 14.4737 ROR2 0 genome.wustl.edu 37 9 94519612 94519612 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc 9 94519612 94519612 G A SNP ROR2 ENST00000375708 human ensembl 74_37 -1 known silent c.405 p.C135 0.987 pirsf_Tyr_kinase_rcpt_ROR,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom - no_errors ROR2 HGNC ENSG00000169071 103 0 0 72 24 25 HNRNPH2 0 genome.wustl.edu 37 X 100667850 100667850 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 100667850 100667850 C A SNP HNRNPH2 ENST00000316594 human ensembl 74_37 +1 known missense c.874 p.H292N 1.000 smart_RRM_dom,pfscan_RRM_dom pfam_RRM_dom,pfam_Znf_CHHC,smart_RRM_dom,pfscan_RRM_dom - no_errors HNRNPH2 HGNC ENSG00000126945 235 0 0 155 26 14.3646 IL13RA2 0 genome.wustl.edu 37 X 114239785 114239785 + Missense_Mutation SNP C C T TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 114239785 114239785 C T SNP IL13RA2 ENST00000243213 human ensembl 74_37 -1 known missense c.1091 p.R364H 0.000 NULL pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3 - no_errors IL13RA2 HGNC ENSG00000123496 239 1 0.416667 121 21 14.7887 DCAF12L1 0 genome.wustl.edu 37 X 125685810 125685810 + Missense_Mutation SNP C C A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 125685810 125685810 C A SNP DCAF12L1 ENST00000371126 human ensembl 74_37 -1 known missense c.782 p.S261I 0.015 superfamily_WD40_repeat_dom,smart_WD40_repeat pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors DCAF12L1 HGNC ENSG00000198889 94 0 0 37 42 53.1646 CD40LG 0 genome.wustl.edu 37 X 135736558 135736558 + Silent SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 135736558 135736558 G A SNP CD40LG ENST00000370629 human ensembl 74_37 +1 known silent c.315 p.T105 0.701 pirsf_TNF_ligand_5 pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_ligand_5,pfscan_TNF_dom,prints_TNF_ligand_5 - no_errors CD40LG HGNC ENSG00000102245 187 0 0 129 23 15.1316 MAP7D2 0 genome.wustl.edu 37 X 20081624 20081624 + Nonsense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 20081624 20081624 G A SNP MAP7D2 ENST00000379643 human ensembl 74_37 -1 known nonsense c.280 p.R94* 1.000 NULL pfam_MAP7 - no_errors MAP7D2 HGNC ENSG00000184368 246 1 0.404858 72 99 57.8947 CHST7 0 genome.wustl.edu 37 X 46433894 46433894 + Missense_Mutation SNP C C G TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 C C Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 46433894 46433894 C G SNP CHST7 ENST00000276055 human ensembl 74_37 +1 known missense c.528 p.D176E 0.735 pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase - no_errors CHST7 HGNC ENSG00000147119 49 0 0 14 4 22.2222 ZC4H2 0 genome.wustl.edu 37 X 64137662 64137662 + Silent SNP T T C TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 T T Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 64137662 64137662 T C SNP ZC4H2 ENST00000447788 human ensembl 74_37 -1 known silent c.513 p.K171 1.000 NULL pfam_Znf-C4H2 - no_errors ZC4H2 HGNC ENSG00000126970 67 0 0 44 8 15.3846 TEX11 0 genome.wustl.edu 37 X 69772062 69772062 + Missense_Mutation SNP G G A TCGA-EQ-5647-01A-01D-1600-08 TCGA-EQ-5647-10A-01D-1600-08 G G Unknown Untested Somatic Phase_IV WXS none Illumina HiSeq feccee20-a62d-4152-b832-b9fdaca87a61 96da0697-64a5-4ec6-89be-40dbaafc65bc X 69772062 69772062 G A SNP TEX11 ENST00000344304 human ensembl 74_37 -1 known missense c.2479 p.P827S 0.985 NULL pfam_Meiosis_specific_SPO22,smart_TPR_repeat - no_errors TEX11 HGNC ENSG00000120498 133 0 0 66 27 29.0323