Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV SCNN1D 6339 mdanderson.org 37 1 1223348 1223348 + Silent SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001130413 exon12 c.C1593T p.Y531Y CCCCTACGGCCAC 81 4 0.05 67 0 0 5 0 0.00 CSF3R 1441 broad.mit.edu 37 1 36932281 36932281 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . CSF3R NM_156039 exon17 c.C2269A p.Q757K CCCCCTGGAGCAC 69 3 0.04 111 0 0 157 85 0 0.00 FOXJ3 22887 broad.mit.edu 37 1 42693609 42693609 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . FOXJ3 NM_001198852 exon5 c.C473A p.P158Q TCCTTCGGATTGG 96 3 0.03 160 0 0 59 25 0 0.00 C1orf177 163747 hgsc.bcm.edu 37 1 55277575 55277575 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001110533 exon5 c.A589G p.S197G AGGATGAGCAACA 123 5 0.04 120 0 0 0 0 SLC30A7 148867 broad.mit.edu;mdanderson.org 37 1 101387372 101387372 + Missense_Mutation SNP C C G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . SLC30A7 NM_001144884 exon8 c.C817G p.L273V TCAATTCTTATAG 54 3 0.06 71 0 0 33 11 2 0.18 DENND2C 163259 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 115130380 115130380 + Silent SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001256404 exon19 c.A2625G p.A875A GAATCCTGCAAAC 108 15 0.14 113 0 0 7 3 0.43 . 0 broad.mit.edu;bcgsc.ca 37 1 247886683 247886685 + In_Frame_Del DEL GGA GGA - novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 GGA GGA Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . TACAGTGGAGAAG 76 9 0.12 88 0 0 0 0 DDIT4 54541 mdanderson.org 37 10 74034544 74034544 + Silent SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_019058 exon3 c.G297T p.L99L GCAGCTGCTGCAG 36 3 0.08 58 0 0 89 0 0.00 PKD2L1 9033 ucsc.edu 37 10 102050229 102050229 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . PKD2L1 NM_016112 exon13 c.C2055A p.S685R TGGGCTGCTCACA 38 4 0.11 53 0 0 103 3 0 0.00 MUC6 4588 bcgsc.ca 37 11 1016871 1016871 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . MUC6 NM_005961 exon31 c.C5930A p.P1977H GAGAAGGGACTGC 357 13 0.04 409 9 0.02200489 408 1 0 0.00 OR51B6 390058 broad.mit.edu 37 11 5373576 5373576 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . OR51B6 NM_001004750 exon1 c.T839C p.L280P ACTTCCTTTTCCC 92 3 0.03 115 0 0 53 0 0 . 0 bcgsc.ca 37 11 62815368 62815368 + RNA SNP G G A rs7125680 bycluster;byfrequency;by2hit2allele;byhapmap TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . GGTGCAGCATGCC 43 7 0.16 36 0 0 0 0 CAPN1 823 bcgsc.ca 37 11 64956151 64956152 + Frame_Shift_Ins INS - - ACACCAC novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 - - Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . CAPN1 NM_001198869 exon10 c.1099_1100insACACCAC p.N367fs AAATGGAACACCA 84 5 0.06 115 0 0 44 128 0 0.00 PPFIA1 8500 mdanderson.org 37 11 70184504 70184504 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_003626 exon13 c.G1516T p.A506S ATTGAAGCACTGA 39 3 0.08 60 0 0 92 0 0.00 AMOTL1 154810 mdanderson.org 37 11 94592856 94592856 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_130847 exon9 c.C2111T p.A704V TGAATGCCGCAGC 35 3 0.09 92 0 0 5 0 0.00 C11orf1 64776 mdanderson.org 37 11 111754552 111754552 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_022761 exon4 c.G401T p.R134L CTCCCCGATACAA 54 3 0.06 81 0 0 40 0 0.00 RERGL 79785 mdanderson.org 37 12 18238558 18238558 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_024730 exon4 c.C182A p.S61Y ACTTGAGAACAAG 41 3 0.07 57 0 0 0 0 ASCL1 429 mdanderson.org 37 12 103352218 103352218 + Silent SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_004316 exon1 c.C196T p.L66L CCGCAGCTGAGAC 44 3 0.07 35 0 0 0 0 NT5DC3 51559 mdanderson.org 37 12 104190747 104190747 + Silent SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001031701 exon6 c.C678A p.L226L GGACAGGAGGGTC 42 3 0.07 72 0 0 19 0 0.00 CYSLTR2 57105 mdanderson.org 37 13 49280977 49280977 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_020377 exon1 c.G24T p.L8F GTCCTTGCAACCA 45 3 0.07 67 0 0 0 0 LRRC16B 90668 mdanderson.org 37 14 24529228 24529228 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_138360 exon23 c.G1918T p.A640S TCCCAAGCCTATC 49 3 0.06 46 0 0 10 0 0.00 WHAMMP3 0 broad.mit.edu 37 15 23191911 23191911 + RNA SNP C C T rs692550 bycluster;bysubmitter;by2hit2allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . TTTCTTCGCACTG 26 6 0.23 25 0 0 0 0 MYO9A 4649 mdanderson.org 37 15 72208799 72208799 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_006901 exon19 c.C2597A p.T866K AGTCTTGTCAGGT 45 3 0.07 67 0 0 32 0 0.00 TSC2 7249 mdanderson.org 37 16 2106707 2106707 + Silent SNP G G T rs189380607 bycluster;by1000genomes;alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001114382 exon8 c.G711T p.P237P CCTCCCGCTGTTC 39 3 0.08 61 0 0 40 1 0.03 OR2C1 4993 mdanderson.org 37 16 3406282 3406282 + Silent SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_012368 exon1 c.G342T p.L114L CATCCTGCTGGTG 32 3 0.09 48 0 0 3 0 0.00 IL27 246778 broad.mit.edu 37 16 28511194 28511194 + Silent SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . IL27 NM_145659 exon5 c.G510A p.E170E CTCCTCCTCTTCC 47 4 0.09 48 0 0 27 4 0 0.00 IL27 246778 broad.mit.edu 37 16 28511197 28511197 + Silent SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . IL27 NM_145659 exon5 c.A507G p.E169E CTCCTCTTCCTCC 46 5 0.11 44 0 0 27 4 0 0.00 METTL16 79066 mdanderson.org 37 17 2323696 2323696 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_024086 exon10 c.C1257A p.S419R TTCTTGGCTATTG 35 3 0.09 47 0 0 45 0 0.00 NEURL4 84461 mdanderson.org 37 17 7225246 7225246 + Missense_Mutation SNP C C T rs199946910 bycluster;by1000genomes TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_032442 exon17 c.G2809A p.A937T AGCCAGCGGCACG 41 3 0.07 44 0 0 0 24 0 0.00 TVP23C 0 ucsc.edu 37 17 15457087 15457087 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic RNA-Seq none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_145301 exon3 c.G152A p.C51Y AGAAGACAGACGA 148 10 0.07 220 11 0.05 36 15 0.42 CCL15 6359 mdanderson.org 37 17 34325386 34325386 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_032965 exon3 c.C178A p.Q60K TGCTTTGTGAGAT 44 4 0.09 61 0 0 3 0 0.00 ARHGAP23 57636 mdanderson.org 37 17 36654704 36654704 + Missense_Mutation SNP C C A novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001199417 exon22 c.C3367A p.L1123I GAGTACCTCCTGC 46 3 0.07 65 0 0 30 0 0.00 PLEKHH3 79990 mdanderson.org 37 17 40822007 40822007 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_024927 exon11 c.G1942A p.A648T GGTAGGCGGCCAT 33 3 0.09 37 0 0 9 0 0.00 KCNH6 81033 broad.mit.edu 37 17 61607872 61607872 + Missense_Mutation SNP G G T rs146703318 alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . KCNH6 NM_030779 exon4 c.G644T p.R215L TGGAGCGGACACA 103 4 0.04 109 0 0 122 1 0 0.00 GPRC5C 55890 mdanderson.org 37 17 72436963 72436963 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_022036 exon2 c.G1183T p.A395S CCGGTTGCAGGTG 37 3 0.08 38 0 0 256 0 0.00 DUS1L 64118 mdanderson.org 37 17 80018749 80018749 + Missense_Mutation SNP G G A novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_022156 exon9 c.C931T p.R311W GACACCGCAGCTT 37 3 0.08 37 0 0 143 0 0.00 MC4R 4160 mdanderson.org 37 18 58039043 58039043 + Silent SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_005912 exon1 c.A540G p.S180S AATGCCTGAAACC 38 3 0.08 46 0 0 0 0 CCDC102B 79839 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 66504042 66504042 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001093729 exon4 c.G42T p.Q14H AACACAGATCTTC 43 6 0.14 52 0 0 4 0 0.00 PTBP1 5725 mdanderson.org 37 19 804539 804539 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_031991 exon6 c.A443G p.Q148R GGGCCCAGGCGGC 22 2 0.09 17 0 0 530 1 0.00 CD97 976 mdanderson.org 37 19 14513646 14513646 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_078481 exon12 c.G1421T p.G474V CCGATGGGGAGGC 51 3 0.06 48 0 0 252 0 0.00 MEF2B 100271849 mdanderson.org 37 19 19256700 19256700 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001145785 exon9 c.C1013A p.P338H GGATAGGGGAAGG 22 3 0.14 29 0 0 5 0 0.00 NUDT19 390916 broad.mit.edu 37 19 33183263 33183263 + Frame_Shift_Del DEL T T - novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . NUDT19 NM_001105570 exon1 c.397delT p.F133fs GAGGCCTTTGAGG 6 2 0.33 16 0 0 15 1 0 0.00 PPP1R14A 94274 mdanderson.org 37 19 38746835 38746835 + Silent SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_033256 exon1 c.C145A p.R49R CCAGCCGCCGCTG 28 3 0.11 33 0 0 67 0 0.00 CD79A 973 mdanderson.org 37 19 42383293 42383293 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001783 exon2 c.G313T p.V105L ATATACGTGTGCC 20 3 0.15 18 0 0 148 0 0.00 . 400986 broad.mit.edu 37 2 96521862 96521862 + Missense_Mutation SNP T T A rs72931734 bycluster TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 ENSG00000174501,NS,carcinoma,0,8 . . . . . TGAGCCTGGCAAT 140 6 0.04 177 0 0 8 20 3 0.15 LONRF2 164832 mdanderson.org 37 2 100916315 100916315 + Silent SNP A A T rs11123823 bycluster;byfrequency;by2hit2allele;byhapmap;by1000genomes;alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 LONRF2,NS,carcinoma,0,1 LONRF2 NM_198461 exon5 c.T1131A p.G377G GTGTAGACCCAGT 75 3 0.04 78 0 0 0 1 2 0 0.00 TMEM87B 84910 mdanderson.org 37 2 112843654 112843654 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_032824 exon9 c.T911C p.I304T TGATCATTGTGAG 50 3 0.06 75 0 0 18 0 0.00 PAX8 7849 ucsc.edu;mdanderson.org 37 2 113992973 113992973 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . PAX8 NM_003466 exon9 c.C1085A p.S362X GTACCTGAGAGGA 52 5 0.10 45 0 0 42 15 0 0.00 THAP4 51078 mdanderson.org 37 2 242572743 242572743 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_015963 exon2 c.G829A p.D277N CCTTGTCGGGTCC 34 3 0.09 48 0 0 231 0 0.00 COL18A1 80781 mdanderson.org 37 21 46897716 46897716 + Missense_Mutation SNP G G T rs373030953 alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_030582 exon7 c.G1598T p.R533L CTGGCCGGGCAGG 47 3 0.06 41 0 0 43 0 0.00 CCDC174 51244 mdanderson.org 37 3 14693367 14693367 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_016474 exon1 c.G24T p.L8F GCCTTTGGACGTC 39 3 0.08 50 0 0 22 0 0.00 HACL1 26061 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 15633164 15633164 + Missense_Mutation SNP G G A novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_012260 exon4 c.C251T p.S84F GGGCCAGAAACAA 128 18 0.14 199 0 0 52 26 0.50 ARIH2OS 646450 mdanderson.org 37 3 48955993 48955993 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 C3orf71,NS,carcinoma,0,1 C3orf71 NM_001123040 exon1 c.C590A p.A197E ACTGACGCCAGGA 47 3 0.06 64 0 0 0 1 15 0 0.00 NISCH 11188 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52522318 52522318 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_007184 exon16 c.A2810G p.N937S GTCGCAACCGCAA 34 7 0.21 49 0 0 185 80 0.43 DNAJC13 23317 ucsc.edu;bcgsc.ca;mdanderson.org 37 3 132199260 132199260 + Silent SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . DNAJC13 NM_015268 exon26 c.G2820T p.V940V CCTTGTGGACTTG 45 5 0.11 83 0 0 253 47 0 0.00 MUC4 4585 hgsc.bcm.edu 37 3 195515102 195515102 + Missense_Mutation SNP G G C rs199995135 TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 MUC4_ENST00000463781,NS,carcinoma,0,1 MUC4_ENST00000463781 NM_018406 exon2 c.C3349G p.H1117D TGGTGTGACCTGT 84 6 0.07 114 2 0.0175438596 0 1 0 0 GUF1 60558 mdanderson.org 37 4 44691417 44691417 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_021927 exon10 c.C1193T p.A398V TGGGTGCTGGCTG 47 3 0.06 81 0 0 41 0 0.00 . 0 broad.mit.edu 37 4 66960408 66960411 + RNA DEL AAAT AAAT - rs142153899 bycluster;by1000genomes;alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 AAAT AAAT Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . GGTAAAAAATAAA 6 2 0.33 4 0 0 30 0 0.00 ALB 213 mdanderson.org 37 4 74272367 74272367 + Silent SNP G G A novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_000477 exon3 c.G159A p.Q53Q TGCTCAGTATCTT 52 3 0.06 56 0 0 0 0 DSPP 1834 broad.mit.edu 37 4 88536863 88536863 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . DSPP NM_014208 exon5 c.A3049G p.N1017D AGCAGTAATAGTA 56 4 0.07 71 1 0.014084507 174 0 0 FLJ33360 0 broad.mit.edu 37 5 6337066 6337067 + RNA DEL AC AC - rs371668571 alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 AC AC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . ATACATACACACA 6 2 0.33 8 0 0 0 0 SLC22A4 6583 mdanderson.org 37 5 131630459 131630459 + Silent SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_003059 exon1 c.T150C p.C50C CCGCTGTCGAGTG 54 3 0.06 55 0 0 2 0 0.00 FOXF2 2295 broad.mit.edu 37 6 1391085 1391086 + In_Frame_Ins INS - - GGC rs147426137 bycluster;by1000genomes TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . FOXF2 NM_001452 exon1 c.903_904insGGC p.G301delinsGG GGCCGGGGGCGGC 7 3 0.43 6 0 0 28 0 0 FOXC1 2296 mdanderson.org 37 6 1610801 1610801 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_001453 exon1 c.C121T p.P41S GCCATGCCGGCCC 45 3 0.07 65 0 0 0 0 HIST1H2BJ 8970 broad.mit.edu 37 6 27100492 27100492 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 HIST1H2BJ,NS,carcinoma,+1,1 HIST1H2BJ NM_021058 exon1 c.A38G p.K13R GAGCCCTTTTTCG 110 4 0.04 112 0 0 21 1 54 0 0.00 ITPR3 3710 mdanderson.org 37 6 33655070 33655070 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_002224 exon45 c.A6143G p.E2048G CACGTGAAGTGGG 39 3 0.08 56 0 0 48 0 0.00 FNDC1 84624 mdanderson.org 37 6 159654735 159654735 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_032532 exon11 c.T3191C p.L1064P GGATGCTCCCCAC 26 2 0.08 30 0 0 5 0 0.00 SDK1 221935 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 7 4056919 4056919 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 SDK1,lower_third,carcinoma,0,1 SDK1 NM_152744 exon17 c.C2537T p.A846V AGGTGGCGGCGTA 115 5 0.04 171 0 0 0 1 6 0 0.00 TWIST1 7291 mdanderson.org 37 7 19156499 19156499 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_000474 exon1 c.T446C p.L149P AGCTTGAGGGTCT 41 3 0.07 81 0 0 125 0 0.00 FZD1 8321 mdanderson.org 37 7 90894958 90894958 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_003505 exon1 c.G763T p.G255C CACGGCGGCGGAG 32 3 0.09 21 0 0 8 0 0.00 THAP5 168451 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 108204781 108204781 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . THAP5 NM_001130475 exon3 c.C1042A p.L348I ACTCTAGAAGAGT 102 11 0.11 160 1 0.00625 51 27 5 0.19 . 0 broad.mit.edu 37 7 123674631 123674632 + RNA INS - - T rs71163720 bycluster TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . TGGGGAATTTTTT 5 1 0.20 4 0 0 0 0 . 0 broad.mit.edu 37 7 128217774 128217800 + RNA DEL GGGGGAGAGGGAGAGGGAGAGGGAGAA GGGGGAGAGGGAGAGGGAGAGGGAGAA - novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 GGGGGAGAGGGAGAGGGAGAGGGAGAA GGGGGAGAGGGAGAGGGAGAGGGAGAA Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . GGAGAGGGGGGAG 6 5 0.83 4 0 0 0 0 BHLHE22 27319 broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 65494286 65494286 + Silent SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . BHLHE22 NM_152414 exon1 c.C939T p.G313G CCAGGGCCAGGCC 26 4 0.15 27 0 0 21 1 0 0.00 RDH10 157506 broad.mit.edu;mdanderson.org 37 8 74207595 74207595 + Missense_Mutation SNP G G A novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . RDH10 NM_172037 exon1 c.G71A p.R24H CGGCGCGCTGGCT 34 3 0.09 27 0 0 31 10 0 0.00 COL14A1 7373 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 121210074 121210074 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_021110 exon7 c.C617T p.P206L GTGACCCCAGAAT 104 17 0.16 108 0 0 11 0 0.00 GRINA 2907 broad.mit.edu 37 8 145065539 145065539 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . GRINA NM_001009184 exon2 c.T148C p.S50P CAGCCCTCCCCCT 148 5 0.03 140 0 0 25 263 1 0.00 RUSC2 9853 mdanderson.org 37 9 35548533 35548533 + Splice_Site SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_014806 exon2 c.2014+1G>T . CTGACGGTAAGGA 21 2 0.10 25 0 0 0 0 LOC642236 0 bcgsc.ca 37 9 68427863 68427863 + RNA SNP T T C rs144877320 bycluster TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . AGTCATTTGCAGT 244 14 0.06 272 5 0.0183823529 5 1 0.20 FAM47C 442444 broad.mit.edu 37 X 37028094 37028094 + Silent SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . FAM47C NM_001013736 exon1 c.A1611G p.A537A CCAGGCACCTCCT 72 5 0.07 64 0 0 267 1 0 0.00 PRRG1 5638 broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 37312624 37312624 + Missense_Mutation SNP A A G novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . PRRG1 NM_001173490 exon4 c.A407G p.D136G CACCAGATGAAGT 120 30 0.25 164 3 0.0182926829 42 5 1 0.20 CASK 8573 broad.mit.edu 37 X 41390360 41390360 + Missense_Mutation SNP T T C novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . CASK NM_003688 exon25 c.A2405G p.E802G CCGTACTCCAAGT 81 3 0.04 73 0 0 93 66 0 0.00 SLC7A3 84889 hgsc.bcm.edu 37 X 70149798 70149798 + Missense_Mutation SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_032803 exon2 c.G50A p.R17H AGTGTACGTCTGC 98 4 0.04 129 0 0 13 0 0.00 HDAC8 55869 mdanderson.org 37 X 71571681 71571681 + Missense_Mutation SNP G G T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . NM_018486 exon10 c.C1013A p.T338K TATGCTGTGAAAA 49 3 0.06 49 0 0 10 0 0.00 . 84443 broad.mit.edu 37 X 106846478 106846480 + In_Frame_Del DEL CAG CAG - rs201186557 alternate_allele TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 CAG CAG Unknown Untested Somatic Phase_I WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . . . . . . CAACAACAGCAGC 132 11 0.08 141 0 0 1 0 0.00 GRIA3 2892 bcgsc.ca;mdanderson.org 37 X 122599615 122599615 + Silent SNP C C T novel TCGA-2G-AAHC-01A-11D-A42Y-10 TCGA-2G-AAHC-10A-01D-A433-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq e622a5c0-a57b-4806-800d-d80da386ad04 f324e93c-3bef-4aaa-8cee-548b180cde75 . GRIA3 NM_000828 exon14 c.C2415T p.C805C AGAGTGCGGCAGC 109 5 0.05 121 0 0 386 0 0