Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV SPEN 23013 mdanderson.org 37 1 16265332 16265332 + Silent SNP G G T rs138107503 alternate_allele TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_015001 exon14 c.G10824T p.A3608A GCAGGCGGCAGGG 36 3 0.08 73 0 0 56 0 0.00 EIF4G3 8672 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 21133864 21133864 + Missense_Mutation SNP G G C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001198801 exon35 c.C4814G p.T1605R AATGCCGTGACAG 272 36 0.13 273 0 0 110 21 0.19 WASF2 10163 broad.mit.edu 37 1 27736268 27736268 + Silent SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . WASF2 NM_006990 exon8 c.G1257A p.P419P AGAAAGCGGTGGT 257 5 0.02 276 1 0.0036231884 41 96 0 0.00 CELSR2 1952 mdanderson.org 37 1 109792751 109792751 + Missense_Mutation SNP T T C rs200277265 TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 CELSR2,colon,carcinoma,0,1 CELSR2 NM_001408 exon1 c.T50C p.L17P CGCCGCTGCTGCT 38 3 0.08 51 0 0 0 1 2 0 0.00 LOC400794 0 broad.mit.edu 37 1 165467666 165467666 + RNA DEL A A - novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . ATTATTAAAAAAT 6 3 0.50 4 0 0 0 0 TPR 7175 broad.mit.edu 37 1 186295344 186295344 + Missense_Mutation SNP A A T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 TPR_ENST00000367478,NS,carcinoma,0,2 TPR NM_003292 exon41 c.T5913A p.D1971E ATCATCATCTTCC 103 4 0.04 62 1 0.0161290323 441 2 218 0 0.00 ARL5B 221079 mdanderson.org 37 10 18948572 18948572 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_178815 exon1 c.G6T p.G2G GATGGGGCTGATC 74 4 0.05 95 0 0 10 0 0.00 PIPSL 0 broad.mit.edu 37 10 95718362 95718365 + RNA DEL TTTC TTTC - novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 TTTC TTTC Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . TTTTCTTTTCTTT 15 10 0.67 12 0 0 0 0 ALDH18A1 5832 mdanderson.org 37 10 97397175 97397175 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001017423 exon4 c.C322A p.Q108K TGCCCTGATTCTG 58 4 0.07 67 0 0 126 0 0.00 TTC40 54777 mdanderson.org 37 10 134672665 134672665 + Missense_Mutation SNP T T C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001200049 exon38 c.A5285G p.D1762G AGGCCATCATCCA 59 3 0.05 90 1 0.0111111111 0 0 FJX1 24147 mdanderson.org 37 11 35640729 35640729 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_014344 exon1 c.G545T p.G182V GCTACGGCATCAA 10 2 0.20 23 0 0 5 0 0.00 OR5AP2 338675 mdanderson.org 37 11 56409844 56409844 + Silent SNP G G A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001002925 exon1 c.C72T p.S24S ATTGTCGGAAAGT 31 3 0.10 33 0 0 0 0 CTNND1 1500 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 57573388 57573392 + Frame_Shift_Del DEL TATCA TATCA - novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 TATCA TATCA Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . CTNND1 NM_001085461 exon10 c.1756_1760del p.586_587del GGAACTTATCATA 86 31 0.36 99 0 0 203 61 0 0.00 ZP1 22917 mdanderson.org 37 11 60640737 60640737 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_207341 exon7 c.G1215T p.L405L CCCCCTGCGGCTT 65 4 0.06 113 0 0 0 0 ZNHIT2 741 mdanderson.org 37 11 64884376 64884376 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_014205 exon1 c.C750A p.A250A ACCCAGGGCTCCG 19 2 0.11 36 0 0 41 0 0.00 RNASEH2C 84153 mdanderson.org 37 11 65487864 65487864 + Missense_Mutation SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_032193 exon2 c.G197A p.R66H AGACAGCGGCCCC 48 3 0.06 82 0 0 193 0 0.00 PDE2A 5138 broad.mit.edu 37 11 72299854 72299854 + Silent SNP G G A rs138984931 bycluster;byfrequency;by1000genomes TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . PDE2A NM_002599 exon13 c.C1044T p.C348C GAAGGCGCAGGCC 135 4 0.03 158 0 0 156 1 0 0.00 PDE3A 5139 broad.mit.edu 37 12 20522511 20522511 + Missense_Mutation SNP C C A rs200052001 bycluster TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 PDE3A,colon,NS,0,1 PDE3A NM_000921 exon1 c.C293A p.A98E CGGCGGCGGAGGA 88 4 0.05 45 1 0.0222222222 184 1 0 0 MARS 4141 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 57898052 57898052 + Silent SNP G G C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 MARS,colon,carcinoma,+1,3 MARS NM_004990 exon11 c.G1338C p.S446S GCAGTCGAGCCAG 187 19 0.10 156 1 0.0064102564 1 3 570 63 0.11 PLBD2 196463 mdanderson.org 37 12 113826311 113826311 + Silent SNP C C T rs377323141 TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_173542 exon12 c.C1650T p.S550S GGCCAGCGGTCCC 26 2 0.08 29 0 0 49 0 0.00 TMEM132D 121256 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 130184692 130184692 + Missense_Mutation SNP C C G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 TMEM132D,face,carcinoma,0,1 TMEM132D NM_133448 exon2 c.G631C p.G211R TCCTCCCGGCAAC 85 15 0.18 97 0 0 0 1 8 3 0.38 ULK1 8408 mdanderson.org 37 12 132398927 132398927 + Silent SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_003565 exon16 c.C1278T p.C426C CAGGTGCGGCGCC 33 3 0.09 53 0 0 97 0 0.00 SUGT1P3 0 broad.mit.edu 37 13 41495331 41495332 + RNA INS - - A rs71298970 bycluster TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . SUGT1P3 . . . . AGTCATTAAAAAA 10 5 0.50 5 0 0 1 1 0 0.00 FAM155A 728215 mdanderson.org 37 13 108518661 108518661 + Missense_Mutation SNP T T C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 FAM155A,NS,carcinoma,0,2 FAM155A NM_001080396 exon1 c.A284G p.Q95R CGCCGCTGCTGCT 29 2 0.07 25 1 0.04 0 2 8 0 0.00 COL4A2 1284 mdanderson.org 37 13 111080922 111080922 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001846 exon7 c.G469T p.G157W TTCACCGGGCCTC 37 3 0.08 75 0 0 111 0 0.00 GAS6 2621 mdanderson.org 37 13 114542742 114542742 + Missense_Mutation SNP C C A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_000820 exon5 c.G425T p.C142F CACAGGCAGAAGA 49 3 0.06 98 0 0 67 0 0.00 CHGA 1113 mdanderson.org 37 14 93398725 93398725 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001275 exon7 c.G819T p.E273D GTCGGAGGCTCTG 45 3 0.07 91 0 0 72 0 0.00 NUDT14 256281 mdanderson.org 37 14 105639424 105639424 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_177533 exon5 c.C603A p.T201T GCCGAGGGTCTTG 45 3 0.07 58 0 0 122 0 0.00 VPS13C 54832 broad.mit.edu 37 15 62283898 62283898 + Missense_Mutation SNP T T C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . VPS13C NM_020821 exon17 c.A1457G p.K486R TCGTCCTTTTTCT 286 4 0.01 172 0 0 506 1 0 0.00 IGDCC4 57722 mdanderson.org 37 15 65688201 65688201 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_020962 exon7 c.C1298A p.T433K ACCCGCGTGGGGG 20 2 0.10 11 0 0 0 0 PCSK6 5046 broad.mit.edu 37 15 101968168 101968168 + Missense_Mutation SNP G G A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . PCSK6 . . . . TCTCCCGCACAAC 56 3 0.05 71 0 0 202 16 0 0.00 CLCN7 1186 mdanderson.org 37 16 1510494 1510494 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001287 exon6 c.C519A p.S173S GGAGAAGGACAGT 51 3 0.06 58 1 0.0172413793 50 0 0.00 C16orf59 80178 mdanderson.org 37 16 2514567 2514567 + Silent SNP G G A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_025108 exon10 c.G1200A p.P400P ACAGCCGCAGGGG 41 3 0.07 42 0 0 53 0 0.00 USP7 7874 mdanderson.org 37 16 9057131 9057131 + Missense_Mutation SNP C C G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 USP7,colon,carcinoma,0,1 USP7 NM_003470 exon1 c.G12C p.Q4H CTGCTGCTGGTGG 12 3 0.25 17 0 0 0 1 31 0 0.00 SRCAP 10847 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 30748991 30748991 + Missense_Mutation SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_006662 exon34 c.C7630T p.P2544S AATCTCCCCTTGG 117 31 0.26 117 0 0 152 57 0.38 CNOT1 23019 mdanderson.org 37 16 58589745 58589745 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 CNOT1_ENST00000441024,NS,carcinoma,-2,2 CNOT1_ENST00000441024 NM_016284 exon20 c.C2547A p.N849K ATAGCTGTTTGCT 49 3 0.06 51 0 0 -2 2 101 0 0.00 LRRC36 55282 mdanderson.org 37 16 67360773 67360773 + Missense_Mutation SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_018296 exon1 c.A8G p.E3G TGGCGGAGCAATG 16 5 0.31 16 0 0 0 0 ZFHX3 463 mdanderson.org 37 16 72821624 72821624 + Silent SNP G G A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_006885 exon10 c.C10551T p.G3517G ACCGCCGCCGCCG 26 3 0.12 21 0 0 0 0 PIEZO1 9780 mdanderson.org 37 16 88798823 88798823 + Missense_Mutation SNP T T G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001142864 exon21 c.A2911C p.T971P GGCGGGTGCCGCT 68 23 0.34 106 32 0.3018867925 17 2 0.12 FAM101B 359845 broad.mit.edu 37 17 295717 295717 + Missense_Mutation SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . FAM101B . . . . AGGGGGAGAGACG 538 7 0.01 525 5 0.0095238095 19 18 0 0.00 SREBF1 6720 broad.mit.edu 37 17 17716753 17716753 + Missense_Mutation SNP G G C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . SREBF1 NM_001005291 exon19 c.C3233G p.A1078G GGGCTGGCCCCCG 48 9 0.19 59 3 0.0508474576 47 92 6 0.07 HDAC5 10014 mdanderson.org 37 17 42155923 42155923 + Missense_Mutation SNP G G T rs377012839 alternate_allele TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001015053 exon26 c.C3277A p.L1093M CCGACAGCAAGGC 45 3 0.07 46 0 0 172 0 0.00 C17orf104 284071 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 42744013 42744016 + Frame_Shift_Del DEL CTAA CTAA - novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 CTAA CTAA Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . C17orf104 NM_001145080 exon5 c.733_736del p.245_246del ATCATTCTAACTG 153 36 0.24 65 0 0 75 7 0 0.00 . 0 broad.mit.edu 37 17 62937153 62937154 + RNA INS - - TAGA rs112724309 bycluster TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . GATTAGGTAGATA 6 2 0.33 7 0 0 0 0 OGFOD3 79701 mdanderson.org 37 17 80361826 80361826 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_175902 exon7 c.C686A p.A229E ACGTGCGCATGCC 26 2 0.08 40 0 0 50 0 0.00 CELF4 56853 mdanderson.org 37 18 34844656 34844656 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_020180 exon10 c.C1230A p.I410I CTGGGGGATCATT 40 3 0.08 64 0 0 4 0 0.00 CXXC1 30827 hgsc.bcm.edu 37 18 47812290 47812290 + Missense_Mutation SNP C C G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 CXXC1,NS,carcinoma,0,1 CXXC1 NM_001101654 exon5 c.G468C p.Q156H CTGCTGCTGGTGA 75 3 0.04 122 1 0.0081967213 0 1 53 1 0.02 WDR7 23335 mdanderson.org 37 18 54398712 54398712 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_052834 exon14 c.G1873T p.A625S CATCCAGCAGTCA 108 5 0.05 115 0 0 3 0 0.00 APC2 10297 mdanderson.org 37 19 1468858 1468858 + Missense_Mutation SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_005883 exon15 c.C5558T p.A1853V AGCTGGCGACGCT 12 2 0.17 10 0 0 0 0 LONP1 9361 mdanderson.org 37 19 5720014 5720014 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_004793 exon1 c.G130A p.G44S AGGTCCGCTGGCC 52 4 0.08 101 0 0 51 0 0.00 EMR1 2015 mdanderson.org 37 19 6921799 6921799 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001974 exon14 c.G1696T p.G566C TCCTTTGGCTGTG 71 4 0.06 117 1 0.0085470085 3 0 0.00 DNMT1 1786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10260600 10260600 + Silent SNP C C A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 DNMT1,NS,carcinoma,0,1 DNMT1 NM_001130823 exon25 c.G2310T p.A770A GGTTTCCGCATCA 188 77 0.41 274 0 0 0 1 91 48 0.53 ASF1B 55723 mdanderson.org 37 19 14236985 14236985 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_018154 exon2 c.C174A p.D58E CACCGAGTCTAGG 39 3 0.08 83 0 0 106 0 0.00 MAU2 23383 broad.mit.edu;mdanderson.org 37 19 19466173 19466173 + Silent SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . MAU2 NM_015329 exon18 c.C1740T p.C580C GGCCTGCAGCCTC 46 4 0.09 69 0 0 38 51 0 0.00 SPTBN4 57731 bcgsc.ca 37 19 41025454 41025454 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . SPTBN4 NM_020971 exon16 c.G3050T p.G1017V GGGCCGGCGGCGC 33 4 0.12 44 0 0 213 0 0 ARHGEF1 9138 mdanderson.org 37 19 42399474 42399474 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_199002 exon12 c.G975T p.R325R CTCTCGGGACCGG 42 3 0.07 37 0 0 69 0 0.00 ZNF497 162968 mdanderson.org 37 19 58868528 58868528 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_198458 exon3 c.C474A p.G158G CTTCTCGCCGCTG 55 4 0.07 61 0 0 9 0 0.00 NT5C1B 93034 mdanderson.org 37 2 18766181 18766181 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001199087 exon5 c.C553A p.P185T GCGGCGGTGAGGA 19 2 0.11 26 0 0 0 0 C2orf81 388963 mdanderson.org 37 2 74642106 74642106 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001145054 exon4 c.C1117A p.R373S AGGGGCGTGTTTG 39 3 0.08 52 0 0 3 0 0.00 MIR4436A 0 broad.mit.edu 37 2 89111346 89111346 + RNA DEL C C - novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . GAGCAACCCCTGG 6 2 0.33 8 0 0 0 0 ANKRD36 375248 broad.mit.edu 37 2 97877455 97877455 + Missense_Mutation SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . ANKRD36 NM_001164315 exon58 c.A3446G p.K1149R AAAAAAAGGATGA 429 7 0.02 237 1 0.0042194093 170 3 0 0.00 GPR39 2863 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 2 133175132 133175132 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001508 exon1 c.G517T p.A173S CTGTTTGCCATGG 76 4 0.05 117 0 0 2 0 0.00 TTN 7273 mdanderson.org 37 2 179477207 179477207 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001267550 exon266 c.C50045A p.P16682H GTGATGGGGGACC 89 4 0.04 109 0 0 1 0 0.00 FARSB 10056 broad.mit.edu 37 2 223488401 223488401 + Missense_Mutation SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 FARSB,NS,carcinoma,0,1 FARSB NM_005687 exon13 c.G1219A p.A407T AGCCAGCGGCTGC 450 6 0.01 482 2 0.0041493776 49 1 120 0 0.00 NGEF 25791 ucsc.edu 37 2 233748732 233748732 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . NGEF NM_019850 exon11 c.C1560A p.F520L GAACAGGAAGAGG 41 4 0.10 83 0 0 198 131 0 0.00 FRG1B 284802 bcgsc.ca 37 20 29628233 29628233 + Missense_Mutation SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . FRG1B . . . . GGGAAAATGGCTT 418 15 0.04 329 4 0.0121580547 181 79 0 0.00 BHLHE23 128408 mdanderson.org 37 20 61637701 61637701 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_080606 exon1 c.C378A p.V126V GGGGATGACGGCT 24 3 0.13 33 0 0 17 0 0.00 THAP7-AS1 0 broad.mit.edu 37 22 21357115 21357115 + RNA SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . ATTTTAATAGGTA 18 3 0.17 24 0 0 10 1 0.10 HRH1 3269 mdanderson.org 37 3 11301767 11301767 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_000861 exon3 c.G1044T p.E348D ATCAGAGGATCAG 69 4 0.06 93 0 0 1 0 0.00 CDC25A 993 mdanderson.org 37 3 48229409 48229409 + Missense_Mutation SNP C C T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_201567 exon1 c.G29A p.R10H CGGCGGCGGTGCG 23 2 0.09 33 0 0 47 0 0.00 GLYCTK 132158 mdanderson.org 37 3 52326751 52326751 + Missense_Mutation SNP C C A rs9813489 bycluster;byfrequency;byhapmap;by1000genomes;alternate_allele TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_145262 exon5 c.C1181A p.T394N TGGAGACCATGGC 40 3 0.08 51 0 0 29 0 0.00 STAB1 23166 mdanderson.org 37 3 52545761 52545761 + Silent SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_015136 exon26 c.G2883T p.L961L CGGCCTGGTAAGG 41 3 0.07 74 0 0 0 0 ACTR8 93973 broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 53905293 53905293 + Silent SNP C C G rs371208984 alternate_allele TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . ACTR8 NM_022899 exon11 c.G1533C p.L511L TTTATCCAGGCCC 164 12 0.07 208 0 0 56 77 2 0.03 IMPG2 50939 mdanderson.org 37 3 100963001 100963001 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_016247 exon13 c.C2174A p.T725K ACAGATGTCAGTA 75 4 0.05 79 0 0 0 0 KLF3 51274 mdanderson.org 37 4 38696516 38696516 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_016531 exon5 c.G845T p.R282I ACAGAAGAACACA 34 3 0.09 77 0 0 16 0 0.00 FRAS1 80144 mdanderson.org 37 4 79284686 79284686 + Silent SNP G G A novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_025074 exon21 c.G2442A p.Q814Q GTGCCAGCACTGT 44 3 0.07 57 0 0 1 0 0.00 MAML3 55534 hgsc.bcm.edu 37 4 140811125 140811125 + Missense_Mutation SNP G G T rs62344940 TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 MAML3_ENST00000509479,colon,carcinoma,+2,2 MAML3_ENST00000509479 NM_018717 exon2 c.C1465A p.Q489K GCTGTTGCTGTTG 52 8 0.15 68 2 0.0294117647 2 2 4 0 0.00 GAB1 2549 mdanderson.org 37 4 144378923 144378923 + Splice_Site SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_207123 exon7 c.1675+1G>T . GAAAGGGTATGTA 47 3 0.06 42 0 0 0 0 CLCN3 1182 mdanderson.org 37 4 170557224 170557224 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001243372 exon2 c.G145T p.G49C TTAGATGGTGACA 45 3 0.07 33 0 0 9 0 0.00 GALNT7 51809 mdanderson.org 37 4 174169131 174169131 + Nonsense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_017423 exon2 c.G127T p.E43X GTATAGGAAGACA 43 3 0.07 51 0 0 24 0 0.00 TRIP13 9319 mdanderson.org 37 5 893132 893132 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001166260 exon1 c.G19T p.D7Y GTGGGCGACCTGA 52 3 0.06 68 0 0 45 0 0.00 SPZ1 84654 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 79616895 79616895 + Silent SNP C C G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . SPZ1 NM_032567 exon1 c.C861G p.V287V TGGAGTCGGTTTC 327 88 0.27 232 3 0.0129310345 60 5 2 0.40 UNC5A 90249 broad.mit.edu 37 5 176295152 176295152 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . UNC5A NM_133369 exon3 c.G314T p.R105L AGGTCCGCATTAA 159 6 0.04 144 0 0 76 2 0 0.00 UBR2 23304 broad.mit.edu 37 6 42615876 42615876 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . UBR2 NM_015255 exon22 c.G2430T p.M810I TGGCATGGAGAGT 299 4 0.01 153 0 0 134 42 0 0.00 GRID2IP 392862 mdanderson.org 37 7 6590901 6590901 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_001145118 exon1 c.C167A p.A56E CCCACCGCCAGCC 16 2 0.13 33 0 0 0 0 LINC00174 285908 mdanderson.org 37 7 65842187 65842187 + RNA SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . . . . . GCCGCTGGCAGGC 44 3 0.07 39 0 0 4 0 0.00 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 82582694 82582694 + Missense_Mutation SNP T T G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 Q9Y6V0-3,rectum,carcinoma,0,3 Q9Y6V0-3 NM_014510 exon5 c.A7575C p.K2525N TGTTGGTTTTTGT 110 33 0.30 100 0 0 0 3 0 0 SSPO 23145 mdanderson.org 37 7 149483303 149483303 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 Q76B61_HUMAN,colon,carcinoma,-1,2 Q76B61_HUMAN NM_198455 exon23 c.G3371T p.W1124L TGCTCTGGGATGG 38 3 0.08 62 0 0 -1 2 0 0 ADAMDEC1 27299 broad.mit.edu 37 8 24256526 24256526 + Missense_Mutation SNP A A G novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . ADAMDEC1 NM_014479 exon9 c.A902G p.K301R GGAAAAAGATCCA 173 4 0.02 127 0 0 69 2 0 0.00 ADAM2 2515 broad.mit.edu 37 8 39678591 39678591 + Missense_Mutation SNP G G T novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . ADAM2 NM_001464 exon6 c.C443A p.A148E ACATCTGCTTTCT 273 6 0.02 100 0 0 124 0 0 PKHD1L1 93035 broad.mit.edu 37 8 110422126 110422126 + Silent SNP T T C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . PKHD1L1 NM_177531 exon19 c.T2004C p.T668T TAGCACTAAGTGT 511 4 0.01 254 0 0 522 0 0 BNC2 54796 mdanderson.org 37 9 16419625 16419625 + Missense_Mutation SNP G G T rs370046975 alternate_allele TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . . NM_017637 exon7 c.C2662A p.H888N TACGATGTAGGTT 49 3 0.06 57 0 0 25 0 0.00 MLLT3 4300 hgsc.bcm.edu;broad.mit.edu 37 9 20414311 20414313 + In_Frame_Del DEL CTG CTG - rs373338988 TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 CTG CTG Unknown Untested Somatic . WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 MLLT3,caecum,carcinoma,0,1 MLLT3 NM_004529 exon5 c.532_534del p.178_178del CTGCTACTGCTGC 89 18 0.20 75 0 0 125 3 0 0.00 ZBED1 9189 broad.mit.edu 37 X 2406764 2406764 + Missense_Mutation SNP T T C novel TCGA-SN-A84Y-01A-11D-A435-10 TCGA-SN-A84Y-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 4995d11c-703d-4935-94e7-2e26ace5db9d 7490b22b-54bc-46e3-8148-e25debbab990 . ZBED1 NM_001171135 exon2 c.A1997G p.E666G CCCCACTCCCCCT 251 14 0.06 331 3 0.0090634441 64 61 0 0.00