Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov_SOL TVarCov_SOL TVaf_SOL NTotCov_SOL NVarCov_SOL NVaf_SOL dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq Ttot_rna Tvar_rna Tvaf_rna note germline-maf-frequency IGV AGRN 375790 mdanderson.org 37 1 979025 979025 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_198576 exon9 c.G1711T p.G571W TCCGACGGGCACA 17 2 0.12 23 0 0 27 0 0.00 SRRM1 10250 broad.mit.edu 37 1 24996016 24996016 + Silent SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . SRRM1 NM_005839 exon14 c.G2142A p.P714P GTCCCCGTCTCCA 233 6 0.03 201 0 0 81 104 3 0.03 SCMH1 22955 mdanderson.org 37 1 41514364 41514364 + Nonsense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001172219 exon11 c.C1304A p.S435X TTACCTGAGATAA 48 3 0.06 37 0 0 47 0 0.00 DOCK7 85440 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 62979205 62979205 + Nonsense_Mutation SNP C C A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001271999 exon33 c.G4192T p.E1398X TAGCTTCTTCAAG 113 33 0.29 126 0 0 12 4 0.33 LRRC7 57554 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 70504317 70504317 + Frame_Shift_Del DEL C C - novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . LRRC7 NM_020794 exon19 c.2695delT p.S899fs ATGATTCCAATCC 147 49 0.33 139 0 0 400 2 0 0.00 SEC22B 9554 broad.mit.edu 37 1 145109312 145109313 + RNA INS - - A rs142440425 bycluster TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . CAAAAACAAAAAA 24 6 0.25 16 0 0 0 0 HAPLN2 60484 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 156595122 156595122 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_021817 exon7 c.C969T p.G323G TTTCGGCTTCCCC 111 43 0.39 116 0 0 0 0 . 0 broad.mit.edu 37 10 5325578 5325578 + RNA DEL C C - novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . GTCAAACAACTGC 10 5 0.50 7 0 0 0 0 ANKRD30A 91074 broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 37442535 37442535 + Missense_Mutation SNP T T G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . ANKRD30A NM_052997 exon13 c.T1575G p.C525W TGTGTGTTTACCC 531 34 0.06 576 1 0.0017361111 448 0 0 PCDH15 65217 mdanderson.org 37 10 56129034 56129034 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001142763 exon6 c.C335A p.P112Q ATCGGTGGCTGCA 25 3 0.12 36 0 0 0 0 FFAR4 338557 mdanderson.org 37 10 95326948 95326948 + Silent SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001195755 exon1 c.G471A p.V157V GGCAGTGCTGCTG 25 3 0.12 26 0 0 0 0 UBTD1 80019 mdanderson.org 37 10 99330066 99330066 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_024954 exon3 c.C470T p.T157M TGTCCACGGGCAA 46 3 0.07 27 0 0 27 0 0.00 OR5L1 219437 hgsc.bcm.edu 37 11 55579329 55579330 + Silent DNP TT TT CC novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 TT TT Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d OR5L1,NS,carcinoma,-1,1 OR5L1 NM_001004738 exon1 c.T388C p.N128N TAACCCTTTGCTA 100 5 0.05 74 0 0 0 -1 1 0 0 CLP1 10978 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 57427264 57427264 + Nonsense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001142597 exon2 c.C316T p.Q106X CGGAGGCAAGCGG 101 29 0.29 94 0 0 15 0 0.00 OR1S2 219958 hgsc.bcm.edu 37 11 57970760 57970760 + Missense_Mutation SNP C C T rs200054918 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d OR1S2,NS,carcinoma,0,3 OR1S2 NM_001004459 exon1 c.G894A p.M298I GGGGTTCATCATG 96 5 0.05 79 2 0.0253164557 0 3 0 0 VEGFB 7423 mdanderson.org 37 11 64003785 64003785 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001243733 exon4 c.C360T p.S120S ACACAGCCAGTGT 37 3 0.08 35 0 0 150 0 0.00 PLCB3 5331 mdanderson.org 37 11 64034987 64034987 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_000932 exon31 c.G3664T p.G1222C CTGTCGGGCGCTG 19 2 0.11 14 0 0 93 0 0.00 UNC93B1 81622 broad.mit.edu;mdanderson.org 37 11 67763107 67763107 + Silent SNP A A G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . CAGGGCACTGCCC 80 8 0.10 60 0 0 43 0 0.00 NADSYN1 55191 mdanderson.org 37 11 71192991 71192991 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_018161 exon13 c.G1070T p.S357I CCTTGAGTGGCGG 45 3 0.07 41 0 0 29 0 0.00 NCAPD2 9918 broad.mit.edu 37 12 6637351 6637351 + Silent SNP C C T rs376232892 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . NCAPD2 NM_014865 exon25 c.C3156T p.C1052C TTTCTGCGACTCC 613 9 0.01 154 0 0 99 404 0 0.00 A2M 2 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 9258885 9258885 + Missense_Mutation SNP A A C novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_000014 exon10 c.T1051G p.S351A CAAATGAGAGTTT 292 19 0.07 118 0 0 77 3 0.04 PRR4 11272 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 10999711 10999711 + Missense_Mutation SNP A A G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_007244 exon3 c.T356C p.F119S CTCTGGAAGAATG 276 28 0.10 100 0 0 54 4 0.07 ATP7B 540 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 52518252 52518252 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_000053 exon14 c.G3236A p.C1079Y TCTTTACAGTATT 35 22 0.63 58 0 0 4 0 0.00 IPO5 3843 ucsc.edu;bcgsc.ca 37 13 98669019 98669019 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . IPO5 NM_002271 exon25 c.G2584T p.D862Y GTGTCAGATATTT 44 4 0.09 79 0 0 90 91 0 0.00 EML5 161436 broad.mit.edu 37 14 89093274 89093274 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . EML5 NM_183387 exon34 c.C4648A p.L1550M CTGCCAGGGTCCA 224 6 0.03 140 0 0 141 2 0 0.00 . 0 bcgsc.ca 37 15 30517228 30517228 + RNA SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . GGTCAGCGCCTGG 21 4 0.19 27 0 0 1 0 0.00 FAM98B 283742 hgsc.bcm.edu 37 15 38776833 38776833 + Silent SNP T T A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 T T Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d FAM98B_ENST00000397609,NS,carcinoma,0,2 FAM98B_ENST00000397609 NM_173611 exon8 c.T1275A p.G425G TGGTGGTGGAGGA 76 4 0.05 82 1 0.012195122 0 2 0 0 DISP2 85455 broad.mit.edu;ucsc.edu;mdanderson.org 37 15 40660083 40660083 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . DISP2 NM_033510 exon8 c.C1770T p.G590G CTTCGGCTACCTG 13 4 0.31 10 0 0 86 0 0 UNC13C 440279 bcgsc.ca;mdanderson.org 37 15 54592474 54592474 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . UNC13C NM_001080534 exon11 c.G4171T p.D1391Y AAAGGGGATGAAG 85 5 0.06 99 0 0 674 1 0 0.00 UBALD1 124402 mdanderson.org 37 16 4659951 4659951 + Missense_Mutation SNP G G T rs112538377 bycluster;alternate_allele TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d FAM100A,NS,haematopoietic_neoplasm,0,1 FAM100A NM_145253 exon3 c.C217A p.P73T AGTTGGGGGGTGT 33 3 0.09 49 0 0 0 1 27 0 0.00 ATP2C2 9914 mdanderson.org 37 16 84402237 84402237 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d ATP2C2,colon,carcinoma,0,1 ATP2C2 NM_014861 exon1 c.G16T p.V6F GGACGCGTCTCCG 42 3 0.07 69 0 0 0 1 0 0 CENPBD1 92806 mdanderson.org 37 16 90038253 90038253 + Silent SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_145039 exon1 c.C78A p.L26L CAATTTGAGGTCA 37 3 0.08 43 0 0 3 0 0.00 C17orf97 400566 mdanderson.org 37 17 263637 263637 + Missense_Mutation SNP T T A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001013672 exon2 c.T1003A p.F335I AAGGGCTTCCACC 132 9 0.07 229 6 0.0262008734 11 0 0.00 WDR81 124997 mdanderson.org 37 17 1631759 1631759 + Missense_Mutation SNP A A G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001163809 exon1 c.A3506G p.E1169G AGGAGGAGGGGGA 77 4 0.05 75 1 0.0133333333 0 0 RAP1GAP2 23108 mdanderson.org 37 17 2901631 2901631 + Silent SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_015085 exon14 c.G1161A p.V387V CGTCGTGCAGGTC 51 3 0.06 60 0 0 2 0 0.00 P2RX5 5026 mdanderson.org 37 17 3593417 3593417 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001204519 exon6 c.C561A p.D187E GGTGAAGTCTTCG 33 3 0.09 47 0 0 0 0 ANKFY1 51479 mdanderson.org 37 17 4086823 4086823 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001257999 exon14 c.C1948A p.L650M CCAGCAGCTGGGC 39 3 0.08 35 0 0 7 0 0.00 DNAH2 146754 broad.mit.edu 37 17 7661813 7661813 + Splice_Site SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . DNAH2 NM_020877 exon13 c.G2052T p.R684S GCACAGGATTATT 108 4 0.04 109 0 0 498 0 0 GUCY2D 3000 mdanderson.org 37 17 7907368 7907368 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_000180 exon3 c.C920T p.A307V ACGATGCCGTGCT 15 2 0.13 30 0 0 0 0 EVPLL 645027 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 18286644 18286644 + Missense_Mutation SNP C C A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001145127 exon8 c.C732A p.D244E GGAGGACGGCAAG 32 12 0.38 57 0 0 0 0 . 0 broad.mit.edu;mdanderson.org 37 17 18332331 18332331 + RNA SNP C C T rs71369490 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . CCGACCCGGAGAT 51 7 0.14 163 1 0.0061349693 0 0 GRP 2922 broad.mit.edu 37 18 56887556 56887556 + Frame_Shift_Del DEL G G - novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . GRP NM_001012512 exon1 c.59delG p.R20fs CGCCCCGGGGGCG 6 2 0.33 10 0 0 17 9 0 0.00 REEP6 92840 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 1496340 1496340 + Silent SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_138393 exon4 c.G405A p.L135L CATGCTGTATCAG 50 12 0.24 47 0 0 53 19 0.36 MRI1 84245 mdanderson.org 37 19 13879417 13879417 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001031727 exon4 c.C590T p.A197V AGCATGCCTTCTG 30 3 0.10 51 0 0 31 0 0.00 TMC4 147798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 54668249 54668249 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001145303 exon7 c.G1050A p.L350L GTTGAGCAGCACC 62 20 0.32 68 0 0 5 2 0.40 TMEM190 147744 mdanderson.org 37 19 55889031 55889031 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_139172 exon3 c.C165T p.C55C CCTCTGCCTGCGT 41 3 0.07 48 0 0 7 0 0.00 NLRC4 58484 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 32476309 32476309 + Silent SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001199138 exon4 c.C624A p.A208A ACCCTGGGCCCTG 113 35 0.31 92 0 0 1 1 1.00 DNAH6 1768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 84852104 84852104 + Missense_Mutation SNP A A C novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001370 exon29 c.A4432C p.K1478Q ACTGGGAAAACAG 174 53 0.30 170 0 0 0 0 TRIM43 129868 broad.mit.edu 37 2 96261953 96261953 + Missense_Mutation SNP A A G rs4058025 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . TRIM43 NM_138800 exon4 c.A511G p.N171D CAGGGCAATGTGG 283 17 0.06 251 0 0 51 0 0 HDAC4 9759 mdanderson.org 37 2 240111669 240111669 + Missense_Mutation SNP G G A rs376138478 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_006037 exon4 c.C199T p.R67W GCTCCCGCAGGGC 28 3 0.11 27 0 0 0 0 ZNF217 7764 hgsc.bcm.edu;mdanderson.org 37 20 52199327 52199327 + Silent SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_006526 exon1 c.C39A p.S13S TAAGAGGGATTGA 91 4 0.04 56 0 0 8 0 0.00 SLC2A4RG 56731 mdanderson.org 37 20 62374111 62374111 + Silent SNP C C A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_020062 exon7 c.C1020A p.P340P CCCACCCGCCTTG 30 3 0.10 26 0 0 217 0 0.00 SCAF4 57466 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 21 33044299 33044310 + In_Frame_Del DEL GCTGTGGCTGCT GCTGTGGCTGCT - novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 GCTGTGGCTGCT GCTGTGGCTGCT Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . SCAF4 NM_020706 exon20 c.2847_2858del p.949_953del CCTGCGGCTGTGG 93 35 0.38 49 0 0 142 90 0 0.00 CBS 875 hgsc.bcm.edu;mdanderson.org 37 21 44479351 44479351 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_000071 exon13 c.C1208A p.T403K TTCTCCGTGAGGT 76 4 0.05 48 0 0 119 1 0.01 KRTAP10-10 353333 mdanderson.org 37 21 46058034 46058034 + Missense_Mutation SNP G G A rs1785472 by2hit2allele TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_181688 exon1 c.G700A p.V234M CGCCCCGTGTGCT 85 6 0.07 43 1 0.023255814 0 0 IL17RA 23765 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 22 17584446 17584446 + Silent SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_014339 exon8 c.G825T p.G275G TAAAGGGTGCTGT 83 6 0.07 63 0 0 12 2 0.17 GGT3P 0 broad.mit.edu 37 22 18778609 18778609 + RNA SNP C C T rs499895 bysubmitter;by2hit2allele TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . . . . . CGGCCACGGCAGC 775 8 0.01 897 2 0.0022296544 1 0 0.00 MTMR3 8897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 30416250 30416250 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_153050 exon17 c.C2602T p.L868F TCTTGCCTTGTAA 96 38 0.40 68 0 0 13 4 0.31 CYP2D7P1 0 broad.mit.edu;ucsc.edu 37 22 42538017 42538017 + RNA SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . CYP2D7P1 . . . . GCCAGCGCTGGGA 118 24 0.20 141 1 0.0070921986 8 6 2 0.33 FANCD2 2177 ucsc.edu 37 3 10091153 10091153 + Silent SNP C C T rs6785756 bycluster;byfrequency TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . FANCD2 NM_001018115 exon17 c.C1509T p.N503N GTTAAACCCATCT 57 16 0.28 53 12 0.2264150943 253 1 0 0.00 SLC26A6 65010 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 48663665 48663665 + Missense_Mutation SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_022911 exon20 c.G2251A p.D751N GGCTGTCGGGGAC 118 37 0.31 100 0 0 74 23 0.31 MFSD7 84179 mdanderson.org 37 4 675970 675970 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_032219 exon10 c.C1457A p.T486K GTCGCCGTGCTGG 15 2 0.13 33 0 0 22 0 0.00 N4BP2 55728 broad.mit.edu 37 4 40099152 40099152 + Missense_Mutation SNP T T A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 T T Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . N4BP2 NM_018177 exon3 c.T192A p.D64E TCCTGATGTAGTG 38 3 0.08 58 0 0 166 1 0 0.00 BEND4 389206 broad.mit.edu;mdanderson.org 37 4 42145560 42145560 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . BEND4 NM_001159547 exon3 c.G939A p.E313E CTCCTCCTCTTCT 71 4 0.06 77 0 0 67 0 0 PDHA2 5161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 96761797 96761797 + Missense_Mutation SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d PDHA2,NS,carcinoma,0,1 PDHA2 NM_005390 exon1 c.G496A p.G166S ATCGTCGGTGCAC 31 12 0.39 57 0 0 0 1 0 0 ELF2 1998 broad.mit.edu 37 4 140046335 140046335 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . ELF2 NM_201999 exon3 c.C221A p.A74E TTCTCGGTCTCAA 103 4 0.04 72 0 0 43 20 0 0.00 OTUD4 54726 hgsc.bcm.edu 37 4 146059041 146059041 + Silent SNP A A G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d OTUD4,bladder,carcinoma,0,2 OTUD4 NM_001102653 exon21 c.T2691C p.H897H GGGAGGATGAGCC 122 5 0.04 88 1 0.0113636364 0 2 14 0 0.00 SKP2 6502 mdanderson.org 37 5 36168536 36168536 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d SKP2_ENST00000274255,NS,carcinoma,0,1 SKP2_ENST00000274255 NM_005983 exon5 c.G658T p.D220Y CTTTCGGATCCCA 49 3 0.06 51 0 0 0 1 30 0 0.00 ATXN1 6310 mdanderson.org 37 6 16327894 16327894 + Missense_Mutation SNP C C A rs201040133 TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001128164 exon7 c.G648T p.Q216H CTGCTGCTGCTGC 39 4 0.10 35 1 0.0285714286 2 0 0.00 NACAD 23148 mdanderson.org 37 7 45123881 45123881 + Missense_Mutation SNP C C T rs61740891 bycluster;byfrequency TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001146334 exon2 c.G1898A p.G633D GTGAGGCCCTCTT 8 2 0.25 10 0 0 0.008 5 0 0.00 UPP1 7378 mdanderson.org 37 7 48139313 48139313 + Nonsense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_003364 exon4 c.G91T p.E31X ATGAAAGAAGATA 48 3 0.06 69 0 0 2 0 0.00 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48654898 48654898 + Missense_Mutation SNP C C G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_152701 exon59 c.C14762G p.A4921G GTGAGGCTCTTTG 129 42 0.33 171 0 0 0 0 MEPCE 56257 hgsc.bcm.edu 37 7 100028454 100028454 + Missense_Mutation SNP G G C novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d MEPCE,NS,carcinoma,0,1 MEPCE NM_019606 exon1 c.G813C p.Q271H CCACCAGCAGCAG 40 2 0.05 47 1 0.0212765957 0 1 15 0 0.00 FOXP2 93986 mdanderson.org 37 7 114270000 114270000 + Silent SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d FOXP2,NS,carcinoma,0,6 FOXP2 NM_148898 exon6 c.G612A p.Q204Q ACAACAGCAGCAG 14 2 0.14 26 0 0 0 6 1 0 0.00 TRPV6 55503 bcgsc.ca 37 7 142573614 142573614 + Missense_Mutation SNP G G T rs201899094 bycluster;alternate_allele TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_1 WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . TRPV6 NM_018646 exon7 c.C806A p.T269K CCATACGTCCACT 54 4 0.07 70 0 0 108 1 0 0.00 MLL3 58508 mdanderson.org 37 7 151962269 151962269 + Silent SNP C C T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_170606 exon8 c.G1038A p.V346V GTCGCACACTGCA 123 9 0.07 117 0 0 1 0 0.00 TTC39B 158219 mdanderson.org 37 9 15175041 15175041 + Missense_Mutation SNP G G T novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_152574 exon19 c.C1934A p.A645D TTTATGGCCTTGT 44 3 0.07 55 0 0 4 0 0.00 GNAQ 2776 mdanderson.org 37 9 80537095 80537095 + Nonsense_Mutation SNP G G T rs200106152 by1000genomes TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_002072 exon2 c.C303A p.Y101X ATACTTGTATGGG 49 6 0.12 42 0 0 0 12 0 0.00 COL27A1 85301 mdanderson.org 37 9 117002729 117002729 + Silent SNP C C A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 C C Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_032888 exon21 c.C2797A p.R933R GGAGCCCGAGGCC 33 3 0.09 45 0 0 39 0 0.00 STXBP1 6812 mdanderson.org 37 9 130434352 130434352 + Missense_Mutation SNP A A G novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 A A Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . NM_001032221 exon12 c.A986G p.Q329R TGTCCCAGATGCT 36 3 0.08 59 0 0 9 0 0.00 PTGES 9536 broad.mit.edu 37 9 132501706 132501707 + Translation_Start_Site INS - - ACACAT rs137962222 bycluster;by1000genomes TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 - - Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . PTGES . . . . TACACACACACAT 5 3 0.60 5 0 0 7 11 0 0.00 CYTB 0 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 MT 14760 14760 + Missense_Mutation SNP G G A novel TCGA-XE-AAOJ-01A-12D-A435-10 TCGA-XE-AAOJ-10A-01D-A438-10 G G Unknown Untested Somatic . WXS none Illumina HiSeq 88e1b406-efd2-4cb8-b0e6-9c731cb5bb8d 2c753e80-371a-4046-a18c-d1f470e43b3d . . ENST00000361789 exon1 c.G14A p.R5H CAATACGCAAAAC 44 39 0.89 111 0 0 0 0